Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 2.1e-103 379.0 187 100.0
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 1.8e-67 259.6 181 75.1
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 5.9e-66 254.6 169 76.9
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 3.6e-63 245.4 183 72.1
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.4e-62 243.4 181 73.5
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 6.7e-62 241.1 180 70.6
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 6.7e-62 241.1 182 69.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 8.8e-62 240.7 170 75.9
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 2.0e-61 239.6 181 71.8
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 2.6e-61 239.2 171 72.5
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 7.5e-61 237.7 180 68.9
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 9.7e-61 237.3 181 68.0
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 9.7e-61 237.3 180 68.9
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.2e-60 236.1 180 68.3
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 3.7e-60 235.3 181 68.0
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 3.7e-60 235.3 183 70.5
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.4e-59 233.4 185 69.2
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 1.4e-59 233.4 181 68.0
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.4e-59 232.6 180 70.0
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.4e-59 232.6 180 69.4
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.4e-59 232.6 180 69.4
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.4e-59 232.6 189 66.1
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 5.3e-59 231.5 180 67.8
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 7.0e-59 231.1 182 67.0
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 2.0e-58 229.6 180 68.9
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 2.0e-58 229.6 184 67.4
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.5e-58 228.8 180 68.9
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 3.5e-58 228.8 182 67.0
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 4.5e-58 228.4 180 67.2
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 4.5e-58 228.4 181 66.3
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 5.9e-58 228.0 180 66.1
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 7.7e-58 227.6 180 66.1
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 1.3e-57 226.9 183 67.2
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.7e-57 226.5 180 65.6
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.2e-57 226.1 181 65.7
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 2.2e-57 226.1 145 74.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 2.2e-57 226.1 182 67.0
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 2.2e-57 226.1 173 67.6
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 3.8e-57 225.3 155 71.6
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 3.8e-57 225.3 186 66.7
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 5.0e-57 224.9 182 65.4
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 6.5e-57 224.6 173 66.5
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 8.5e-57 224.2 184 69.0
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 3.2e-56 222.2 180 65.6
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 3.2e-56 222.2 182 63.7
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 4.2e-56 221.9 177 63.8
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 4.2e-56 221.9 181 64.1
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 5.5e-56 221.5 180 65.0
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 7.2e-56 221.1 181 64.1
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 7.2e-56 221.1 185 64.9
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 1.2e-55 220.3 181 64.1
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.6e-55 219.9 177 63.3
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 2.1e-55 219.5 177 62.7
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 2.1e-55 219.5 171 66.1
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 2.7e-55 219.2 172 66.3
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 3.6e-55 218.8 181 63.0
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 3.6e-55 218.8 181 63.0
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 3.6e-55 218.8 179 64.8
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 3.6e-55 218.8 179 64.8
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 3.6e-55 218.8 136 76.5
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 3.6e-55 218.8 183 65.0
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 4.7e-55 218.4 180 64.4
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 8.0e-55 217.6 184 63.6
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.0e-54 217.2 177 63.3
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 1.0e-54 217.2 177 65.5
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 1.4e-54 216.9 181 66.9
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.8e-54 216.5 180 62.8
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 1.8e-54 216.5 176 66.5
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 2.3e-54 216.1 146 70.5
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 2.3e-54 216.1 163 66.9
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 4.0e-54 215.3 181 62.4
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 4.0e-54 215.3 180 62.2
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 4.0e-54 215.3 172 65.7
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 5.2e-54 214.9 174 66.7
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 5.2e-54 214.9 163 67.5
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 8.8e-54 214.2 171 64.3
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 2.0e-53 213.0 172 65.1
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 2.6e-53 212.6 169 70.4
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 3.4e-53 212.2 182 61.5
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 3.4e-53 212.2 174 65.5
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 3.4e-53 212.2 172 65.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 2.8e-52 209.1 127 78.7
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 2.8e-52 209.1 202 57.9
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 3.7e-52 208.8 202 56.4
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 6.3e-52 208.0 171 64.3
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 1.1e-51 207.2 182 61.0
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 1.8e-51 206.5 137 76.6
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 4.1e-51 205.3 136 72.1
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 2.0e-50 203.0 133 73.7
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 2.7e-50 202.6 134 71.6
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 3.5e-50 202.2 130 76.9
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.5e-48 196.1 183 61.7
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.1e-43 179.1 111 81.1
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 9.5e-40 167.5 182 56.0
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.6e-31 140.2 137 56.2
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 2.1e-23 113.2 57 86.0
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 3.6e-23 112.5 61 78.7
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 3.1e-22 109.4 72 72.2
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 2.0e-21 106.7 123 52.8
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.9e-19 100.1 55 83.6
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 1.2e-18 97.4 66 74.2
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 4.6e-18 95.5 49 87.8
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 6.0e-18 95.1 110 51.8
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 3.0e-17 92.8 94 55.3
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 2.6e-13 79.7 64 62.5
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 1.1e-06 57.8 75 48.0


User provided reference genes

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