Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0289461 Lupinus albus HOM05D002619 ORTHO05D002804 2.3e-162 575.5 285 100.0
Glyma.03G173500 Glycine max HOM05D002619 ORTHO05D002804 3.8e-56 222.6 287 53.7
VMungo1383G3532 Vigna mungo HOM05D002619 ORTHO05D002804 4.0e-50 202.6 311 47.6
Glyma.19G174400 Glycine max HOM05D002619 ORTHO05D002804 1.2e-49 201.1 284 50.0
Lj1g0014565 Lotus japonicus HOM05D002619 ORTHO05D002804 1.3e-43 181.0 278 48.9
Phvul.001G171000 Phaseolus vulgaris HOM05D002619 ORTHO05D002804 2.8e-43 179.9 282 44.7
Medtr7g100342 Medicago truncatula HOM05D002619 ORTHO05D002804 1.1e-31 141.4 299 35.1
TPR.G21451 Trifolium pratense HOM05D002619 ORTHO05D002804 6.3e-27 125.6 290 36.6
arahy.Tifrunner.gnm1.ann1.TMHH4X Arachis hypogaea HOM05D002619 ORTHO05D002804 2.2e-24 117.1 280 37.5
Psat3g049440 Pisum sativum HOM05D017850 ORTHO05D002804 9.7e-20 101.7 252 34.1
TAR623G0548 Trochodendron aralioides HOM05D002619 ORTHO05D002804 6.3e-19 99.0 291 33.3
PGR102G0064 Punica granatum HOM05D002619 ORTHO05D002804 5.9e-17 92.4 228 36.4
CSS0041199 Camellia sinensis var. sinensis HOM05D002619 ORTHO05D002804 5.0e-16 89.4 281 31.3
Dinv32845 Davidia involucrata HOM05D002619 ORTHO05D002804 5.0e-16 89.4 284 33.5
TAR633G1544 Trochodendron aralioides HOM05D002619 ORTHO05D002804 5.0e-16 89.4 274 30.7
QL07p046673 Quercus lobata HOM05D002619 ORTHO05D002804 3.2e-15 86.7 304 32.2
TAR369G0856 Trochodendron aralioides HOM05D002619 ORTHO05D002804 6.1e-14 82.4 310 33.5
CDE02G0555 Ceratophyllum demersum HOM05D002619 ORTHO05D002804 6.8e-13 79.0 207 32.4
Prupe.6G248900 Prunus persica HOM05D000001 ORTHO05D009784 8.8e-13 78.6 220 31.8
Eucgr.B02404 Eucalyptus grandis HOM05D002619 ORTHO05D002804 1.2e-12 78.2 285 29.5
Manes.11G134700 Manihot esculenta HOM05D002619 ORTHO05D002804 2.0e-12 77.4 277 28.2
Cc01_g12250 Coffea canephora HOM05D002619 ORTHO05D002804 3.4e-12 76.6 224 30.4
Actinidia37246 Actinidia chinensis HOM05D002619 ORTHO05D002804 7.5e-12 75.5 242 30.6
Thecc.09G328300 Theobroma cacao HOM05D002619 ORTHO05D002804 2.2e-11 73.9 277 28.2
Actinidia03780 Actinidia chinensis HOM05D002619 ORTHO05D002804 2.8e-11 73.6 227 31.3
Nn2g10492 Nelumbo nucifera HOM05D002619 ORTHO05D002804 2.8e-11 73.6 327 26.6
GSVIVG01025607001 Vitis vinifera HOM05D000001 ORTHO05D009784 4.8e-11 72.8 223 31.8
MBI14_g29800_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 6.3e-11 72.4 262 27.5
Eucgr.B00641 Eucalyptus grandis HOM05D002619 ORTHO05D002804 1.1e-10 71.6 246 27.6
Nitab4.5_0003179g0040 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.1e-10 71.6 297 28.6
MBI05_g38495_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 1.4e-10 71.2 218 29.8
Sabra08G0006000 Salix brachista HOM05D002619 ORTHO05D002804 1.4e-10 71.2 285 27.4
CDE09G0663 Ceratophyllum demersum HOM05D002619 ORTHO05D002920 3.1e-10 70.1 207 31.4
HanXRQChr01g0009911 Helianthus annuus HOM05D002619 ORTHO05D002804 3.1e-10 70.1 227 30.4
FAN02G3020 Fragaria x ananassa HOM05D002619 ORTHO05D002804 4.1e-10 69.7 228 28.9
HanXRQChr11g0340291 Helianthus annuus HOM05D002619 ORTHO05D002804 4.1e-10 69.7 260 28.1
COL.COLO4_18442 Corchorus olitorius HOM05D002619 ORTHO05D002804 9.1e-10 68.6 283 28.3
Peaxi162Scf00406g00007 Petunia axillaris HOM05D002619 ORTHO05D002804 9.1e-10 68.6 232 30.2
Cpa.g.sc252.23 Carica papaya HOM05D002619 ORTHO05D002804 1.2e-09 68.2 276 30.1
Aqoxy4G03023 Aquilegia oxysepala HOM05D002619 ORTHO05D002804 2.0e-09 67.4 283 30.7
Gohir.D03G130000 Gossypium hirsutum HOM05D002619 ORTHO05D002804 2.0e-09 67.4 208 31.2
GSVIVG01025039001 Vitis vinifera HOM05D002619 ORTHO05D002804 2.0e-09 67.4 288 28.5
ClCG02G020460 Citrullus lanatus HOM05D002619 ORTHO05D002804 2.7e-09 67.0 264 31.1
Cc01_g04170 Coffea canephora HOM05D002619 ORTHO05D002804 2.7e-09 67.0 231 30.7
FAN05G1565 Fragaria x ananassa HOM05D002619 ORTHO05D002804 2.7e-09 67.0 224 28.6
FvH4_6g14520 Fragaria vesca HOM05D002619 ORTHO05D002804 3.5e-09 66.6 231 29.0
FAN14G3506 Fragaria x ananassa HOM05D002619 ORTHO05D002804 3.5e-09 66.6 263 29.3
Lj1A161T60 Lonicera japonica HOM05D002619 ORTHO05D002804 3.5e-09 66.6 228 30.7
ClCG03G001850 Citrullus lanatus HOM05D002619 ORTHO05D002804 4.5e-09 66.2 221 29.0
CsaV3_6G022160 Cucumis sativus L. HOM05D002619 ORTHO05D002804 4.5e-09 66.2 255 29.8
Duzib170G0200 Durio zibethinus HOM05D002619 ORTHO05D002804 4.5e-09 66.2 281 26.0
RcHm_v2.0_Chr3g0467601 Rosa chinensis HOM05D002619 ORTHO05D002804 4.5e-09 66.2 255 28.2
Gorai.003G136700 Gossypium raimondii HOM05D002619 ORTHO05D002804 7.7e-09 65.5 208 31.2
CsaV3_1G033710 Cucumis sativus L. HOM05D002619 ORTHO05D002804 1.0e-08 65.1 225 28.0
Nitab4.5_0003179g0060 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.3e-08 64.7 232 28.0
THA.LOC104826341 Tarenaya hassleriana HOM05D002619 ORTHO05D002804 1.7e-08 64.3 222 29.3
CAN.G820.11 Capsicum annuum HOM05D002619 ORTHO05D002804 2.2e-08 63.9 293 26.6
MELO3C020695.2 Cucumis melo HOM05D002619 ORTHO05D002804 2.2e-08 63.9 222 26.6
Dinv26273 Davidia involucrata HOM05D002619 ORTHO05D002804 2.9e-08 63.5 224 29.9
TWI31G0042 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 3.8e-08 63.2 257 27.2
Peaxi162Scf00406g00012 Petunia axillaris HOM05D002619 ORTHO05D002804 5.0e-08 62.8 277 25.3
Cfa011444 Carpinus fangiana HOM05D002619 ORTHO05D002804 8.5e-08 62.0 323 27.2
CiPaw.14G072600 Carya illinoinensis HOM05D002619 ORTHO05D002804 8.5e-08 62.0 286 28.0
Duzib150G0531 Durio zibethinus HOM05D002619 ORTHO05D002804 8.5e-08 62.0 259 28.2
Hma1.2p1_0035F.1_g022040 Hydrangea macrophylla HOM05D002619 ORTHO05D002804 8.5e-08 62.0 287 26.5
ECA248G0080 Erigeron canadensis HOM05D002619 ORTHO05D002804 1.5e-07 61.2 242 28.9
Prupe.6G085300 Prunus persica HOM05D002619 ORTHO05D002804 1.5e-07 61.2 236 27.5
Sc21g0005450 Simmondsia chinensis HOM05D002619 ORTHO05D002804 1.5e-07 61.2 218 28.9
Sabra16G0141400 Salix brachista HOM05D002619 ORTHO05D002804 1.9e-07 60.8 221 30.3
PGSC0003DMG400015561 Solanum tuberosum HOM05D002619 ORTHO05D002804 1.9e-07 60.8 215 28.8
MELO3C013675.2 Cucumis melo HOM05D002619 ORTHO05D002804 2.5e-07 60.5 255 29.4
Nitab4.5_0000610g0270 Nicotiana tabacum HOM05D002619 ORTHO05D002804 2.5e-07 60.5 242 28.9
Duzib168G0755 Durio zibethinus HOM05D002619 ORTHO05D002804 3.2e-07 60.1 259 27.4
Potri.001G235200 Populus trichocarpa HOM05D002619 ORTHO05D002804 3.2e-07 60.1 226 27.0
Lsat_1_v5_gn_5_166460 Lactuca sativa HOM05D002619 ORTHO05D002804 5.5e-07 59.3 258 27.1
Sed0011374 Sechium edule HOM05D002619 ORTHO05D002804 5.5e-07 59.3 226 30.1
TWI79G1700 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 5.5e-07 59.3 259 27.8
Nitab4.5_0000610g0250 Nicotiana tabacum HOM05D002619 ORTHO05D002804 9.4e-07 58.5 220 29.1
Rhsim13G0087400 Rhododendron simsii HOM05D002619 ORTHO05D002804 9.4e-07 58.5 220 29.5
Sabra06G0201000 Salix brachista HOM05D002619 ORTHO05D002804 9.4e-07 58.5 228 27.2
Potri.006G256801 Populus trichocarpa HOM05D002619 ORTHO05D002804 1.6e-06 57.8 256 25.0
Hund05001 Selenicereus undatus HOM05D002619 ORTHO05D002804 1.6e-06 57.8 214 27.6
MD03G1100400 Malus domestica HOM05D002619 ORTHO05D002804 2.1e-06 57.4 314 27.1
vmacro03117 Vaccinium macrocarpon HOM05D002619 ORTHO05D002804 2.1e-06 57.4 279 26.9
Nitab4.5_0000610g0280 Nicotiana tabacum HOM05D002619 ORTHO05D002804 3.6e-06 56.6 230 28.7
CiPaw.13G099700 Carya illinoinensis HOM05D002619 ORTHO05D002804 4.7e-06 56.2 284 28.2
Nitab4.5_0003179g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 4.7e-06 56.2 228 27.6
PSO206G0036 Papaver somniferum HOM05D002619 ORTHO05D002804 4.7e-06 56.2 290 27.2
QL01p033488 Quercus lobata HOM05D002619 ORTHO05D002804 4.7e-06 56.2 249 28.5
HPP92_012580 Vanilla planifolia HOM05D002619 ORTHO05D002804 4.7e-06 56.2 240 29.2
Oeu040288.1 Olea europaea HOM05D002619 ORTHO05D002804 6.1e-06 55.8 234 26.5
PGSC0003DMG400010881 Solanum tuberosum HOM05D002619 ORTHO05D002804 6.1e-06 55.8 210 27.6
THA.LOC104800642 Tarenaya hassleriana HOM05D002619 ORTHO05D002804 6.1e-06 55.8 253 26.5
Psat4g099560 Pisum sativum HOM05D017850 ORTHO05D002804 8.0e-06 55.5 120 33.3


User provided reference genes

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