Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0288441 Lupinus albus HOM05D003394 ORTHO05D004183 2.9e-72 275.4 168 100.0
Lalb_Chr02g0153591 Lupinus albus HOM05D003394 ORTHO05D004183 3.4e-65 251.9 159 98.7
Lalb_Chr21g0314591 Lupinus albus HOM05D003394 ORTHO05D004183 2.1e-62 242.7 159 93.1
Glyma.03G177100 Glycine max HOM05D003394 ORTHO05D004183 6.7e-61 237.7 160 78.8
PGR142G1653 Punica granatum HOM05D003394 ORTHO05D004183 8.7e-61 237.3 160 76.9
Eucgr.G02789 Eucalyptus grandis HOM05D003394 ORTHO05D004183 1.5e-60 236.5 160 90.6
GSVIVG01016357001 Vitis vinifera HOM05D003394 ORTHO05D004183 5.7e-60 234.6 160 83.8
CANSAT56G1215 Cannabis sativa HOM05D003394 ORTHO05D004183 1.3e-59 233.4 160 86.2
CsaV3_5G006370 Cucumis sativus L. HOM05D003394 ORTHO05D004183 1.3e-59 233.4 160 81.2
Glyma.13G136200 Glycine max HOM05D003394 ORTHO05D004183 2.2e-59 232.6 160 77.5
Dinv35697 Davidia involucrata HOM05D003394 ORTHO05D004183 2.8e-59 232.3 160 75.6
Cpa.g.sc2216.1 Carica papaya HOM05D003394 ORTHO05D004183 3.7e-59 231.9 160 73.8
Dinv31373 Davidia involucrata HOM05D003394 ORTHO05D004183 4.8e-59 231.5 160 87.5
QL08p057203 Quercus lobata HOM05D003394 ORTHO05D004183 4.8e-59 231.5 161 81.4
CSS0037704 Camellia sinensis var. sinensis HOM05D003394 ORTHO05D004183 6.3e-59 231.1 160 91.2
CiPaw.02G177300 Carya illinoinensis HOM05D003394 ORTHO05D004183 6.3e-59 231.1 160 80.6
MELO3C011721.2 Cucumis melo HOM05D003394 ORTHO05D004183 6.3e-59 231.1 160 90.0
Thecc.10G065500 Theobroma cacao HOM05D003394 ORTHO05D004183 1.1e-58 230.3 162 77.8
CSS0040010 Camellia sinensis var. sinensis HOM05D003394 ORTHO05D004183 1.4e-58 229.9 160 89.4
Glyma.10G048400 Glycine max HOM05D003394 ORTHO05D004183 1.4e-58 229.9 161 75.2
Duzib093G0661 Durio zibethinus HOM05D003394 ORTHO05D004183 2.4e-58 229.2 160 73.8
Actinidia38239 Actinidia chinensis HOM05D003394 ORTHO05D004183 4.1e-58 228.4 160 75.6
Actinidia03017 Actinidia chinensis HOM05D003394 ORTHO05D057896 5.3e-58 228.0 160 75.6
Duzib128G0237 Durio zibethinus HOM05D003394 ORTHO05D004183 6.9e-58 227.6 162 86.4
Thecc.05G052300 Theobroma cacao HOM05D003394 ORTHO05D004183 6.9e-58 227.6 160 76.9
MBI14_g24892_MAGBIO Magnolia biondii HOM05D003394 ORTHO05D004183 9.0e-58 227.3 161 80.1
Ciclev10012046m.g Citrus clementina HOM05D003394 ORTHO05D004183 1.5e-57 226.5 160 83.8
Duzib114G0225 Durio zibethinus HOM05D003394 ORTHO05D004183 1.5e-57 226.5 162 89.5
QL07p045546 Quercus lobata HOM05D003394 ORTHO05D004183 1.5e-57 226.5 160 75.0
TWI15G1024 Tripterygium wilfordii HOM05D003394 ORTHO05D004183 1.5e-57 226.5 162 79.0
Potri.016G084100 Populus trichocarpa HOM05D003394 ORTHO05D004183 2.0e-57 226.1 160 76.9
Atru.chr8.2539 Acer truncatum HOM05D003394 ORTHO05D004183 3.4e-57 225.3 160 74.4
CDE02G0377 Ceratophyllum demersum HOM05D003394 ORTHO05D004183 4.5e-57 224.9 160 81.9
ClCG02G013800 Citrullus lanatus HOM05D003394 ORTHO05D004183 4.5e-57 224.9 160 87.5
Hma1.2p1_0111F.1_g053750 Hydrangea macrophylla HOM05D003394 ORTHO05D004183 4.5e-57 224.9 162 72.2
Duzib128G1992 Durio zibethinus HOM05D003394 ORTHO05D004183 5.9e-57 224.6 160 78.8
MD12G1126400 Malus domestica HOM05D003394 ORTHO05D004183 5.9e-57 224.6 161 73.3
Actinidia05277 Actinidia chinensis HOM05D003394 ORTHO05D004183 1.0e-56 223.8 161 88.8
Haze_16950 Corylus avellana HOM05D003394 ORTHO05D004183 1.0e-56 223.8 159 88.1
TAR636G1733 Trochodendron aralioides HOM05D003394 ORTHO05D004183 1.0e-56 223.8 160 81.2
FvH4_6g15130 Fragaria vesca HOM05D003394 ORTHO05D004183 1.3e-56 223.4 160 70.0
FAN14G5170 Fragaria x ananassa HOM05D003394 ORTHO05D004183 1.3e-56 223.4 160 70.0
A07p00440 Brassica napus HOM05D003394 ORTHO05D004183 1.7e-56 223.0 161 79.5
BraA07t27835Z Brassica rapa HOM05D003394 ORTHO05D004183 1.7e-56 223.0 161 84.5
Hma1.2p1_0348F.1_g131920 Hydrangea macrophylla HOM05D003394 ORTHO05D004183 1.7e-56 223.0 160 71.9
Manes.09G070600 Manihot esculenta HOM05D003394 ORTHO05D004183 1.7e-56 223.0 160 76.9
CDE09G0715 Ceratophyllum demersum HOM05D003394 ORTHO05D004183 2.2e-56 222.6 160 84.4
RcHm_v2.0_Chr3g0468431 Rosa chinensis HOM05D003394 ORTHO05D004183 2.2e-56 222.6 160 70.0
BcaB08g34902 Brassica carinata HOM05D003394 ORTHO05D004183 2.9e-56 222.2 161 80.1
CiPaw.01G277700 Carya illinoinensis HOM05D003394 ORTHO05D004183 2.9e-56 222.2 159 88.7
BcaB03g16817 Brassica carinata HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
BcaC06g36708 Brassica carinata HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
BcaC07g41222 Brassica carinata HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
C07p00860 Brassica napus HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
BolC7t40525H Brassica oleracea HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
BolC8t51787H Brassica oleracea HOM05D003394 ORTHO05D004183 3.8e-56 221.9 161 80.1
Gohir.A05G343800 Gossypium hirsutum HOM05D003394 ORTHO05D004183 3.8e-56 221.9 162 88.9
Gohir.D04G082200 Gossypium hirsutum HOM05D003394 ORTHO05D004183 3.8e-56 221.9 162 88.9
Gorai.012G092900 Gossypium raimondii HOM05D003394 ORTHO05D004183 3.8e-56 221.9 162 88.9
Potri.008G045600 Populus trichocarpa HOM05D003394 ORTHO05D004183 3.8e-56 221.9 160 88.1
BraA09t41282Z Brassica rapa HOM05D003394 ORTHO05D004183 5.0e-56 221.5 161 79.5
FAN09G2519 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.0e-56 221.5 160 69.4
Atru.chr12.617 Acer truncatum HOM05D003394 ORTHO05D004183 6.5e-56 221.1 161 72.7
BcaNung04098 Brassica carinata HOM05D003394 ORTHO05D004183 6.5e-56 221.1 161 80.1
A09p12770 Brassica napus HOM05D003394 ORTHO05D004183 6.5e-56 221.1 161 80.1
Sp3g33510 Schrenkiella parvula HOM05D003394 ORTHO05D004183 8.5e-56 220.7 161 77.0
Manes.08G001802 Manihot esculenta HOM05D003394 ORTHO05D004183 1.1e-55 220.3 160 78.1
Aqoxy4G03149 Aquilegia oxysepala HOM05D003394 ORTHO05D004183 1.9e-55 219.5 161 80.7
Cc06_g03410 Coffea canephora HOM05D003394 ORTHO05D004183 1.9e-55 219.5 164 79.3
Sed0009252 Sechium edule HOM05D003394 ORTHO05D004183 1.9e-55 219.5 159 87.4
TAR633G2643 Trochodendron aralioides HOM05D003394 ORTHO05D004183 1.9e-55 219.5 160 85.0
SalBow4G2948 Salvia bowleyana HOM05D003394 ORTHO05D004183 2.5e-55 219.2 163 77.9
THA.LOC104799363 Tarenaya hassleriana HOM05D003394 ORTHO05D004183 2.5e-55 219.2 161 83.9
Thhalv10002021m.g Eutrema salsugineum HOM05D003394 ORTHO05D004183 3.2e-55 218.8 161 76.4
Medtr1g067020 Medicago truncatula HOM05D003394 ORTHO05D004183 3.2e-55 218.8 159 85.5
TPR.G35662 Trifolium pratense HOM05D003394 ORTHO05D004183 4.2e-55 218.4 159 86.8
CARHR110770 Cardamine hirsuta HOM05D003394 ORTHO05D004183 5.5e-55 218.0 161 77.6
Ciclev10031903m.g Citrus clementina HOM05D003394 ORTHO05D004183 5.5e-55 218.0 160 85.0
Lsat_1_v5_gn_9_66560 Lactuca sativa HOM05D003394 ORTHO05D004183 5.5e-55 218.0 160 85.6
Potri.006G132800 Populus trichocarpa HOM05D003394 ORTHO05D004183 5.5e-55 218.0 160 78.1
unitig_8.g4664 Utricularia gibba HOM05D003394 ORTHO05D004183 5.5e-55 218.0 164 69.5
BolC9t54420H Brassica oleracea HOM05D003394 ORTHO05D004183 7.2e-55 217.6 161 76.4
BraA09t36921Z Brassica rapa HOM05D003394 ORTHO05D004183 7.2e-55 217.6 161 76.4
Oeu029424.1 Olea europaea HOM05D003394 ORTHO05D004183 7.2e-55 217.6 164 69.5
HPP92_001029 Vanilla planifolia HOM05D003394 ORTHO05D004183 7.2e-55 217.6 163 79.1
Carub.0003s3461 Capsella rubella HOM05D003394 ORTHO05D004183 9.4e-55 217.2 161 75.8
Prupe.2G220500 Prunus persica HOM05D003394 ORTHO05D004183 9.4e-55 217.2 159 89.3
AL3G47810 Arabidopsis lyrata HOM05D003394 ORTHO05D004183 1.6e-54 216.5 161 75.2
AT2G20280 Arabidopsis thaliana HOM05D003394 ORTHO05D004183 1.6e-54 216.5 161 75.2
DCAR_009274 Daucus carota HOM05D003394 ORTHO05D004183 1.6e-54 216.5 160 81.2
vmacro07093 Vaccinium macrocarpon HOM05D003394 ORTHO05D004183 1.6e-54 216.5 160 86.9
Zm00001eb148820 Zea mays HOM05D003394 ORTHO05D004183 1.6e-54 216.5 162 74.7
HanXRQChr08g0219711 Helianthus annuus HOM05D003394 ORTHO05D004183 2.1e-54 216.1 160 72.5
HanXRQChr15g0496801 Helianthus annuus HOM05D003394 ORTHO05D004183 2.1e-54 216.1 160 75.6
Psat0ss6317g0120 Pisum sativum HOM05D003394 ORTHO05D004183 2.1e-54 216.1 159 85.5
Rhsim03G0141300 Rhododendron simsii HOM05D003394 ORTHO05D004183 2.1e-54 216.1 160 80.0
VMungo0720G1327 Vigna mungo HOM05D003394 ORTHO05D004183 2.1e-54 216.1 160 88.1
RcHm_v2.0_Chr1g0364371 Rosa chinensis HOM05D003394 ORTHO05D004183 2.7e-54 215.7 159 78.6
arahy.Tifrunner.gnm1.ann1.TFIN41 Arachis hypogaea HOM05D003394 ORTHO05D004183 3.6e-54 215.3 161 83.9
arahy.Tifrunner.gnm1.ann1.V9C9EC Arachis hypogaea HOM05D003394 ORTHO05D004183 3.6e-54 215.3 161 83.9
ATR0594G173 Amborella trichopoda HOM05D003394 ORTHO05D004183 4.6e-54 214.9 160 81.2
PGR004G2225 Punica granatum HOM05D003394 ORTHO05D004183 4.6e-54 214.9 161 77.6
Haze_20669 Corylus avellana HOM05D003394 ORTHO05D004183 7.9e-54 214.2 160 85.0
MD04G1114100 Malus domestica HOM05D003394 ORTHO05D004183 7.9e-54 214.2 161 78.3
Hund20140 Selenicereus undatus HOM05D003394 ORTHO05D004183 7.9e-54 214.2 160 83.8
HanXRQChr12g0370391 Helianthus annuus HOM05D003394 ORTHO05D004183 1.8e-53 213.0 160 73.1
Os01g0834700 Oryza sativa ssp. japonica HOM05D003394 ORTHO05D004183 1.8e-53 213.0 162 76.5
Lsat_1_v5_gn_8_20961 Lactuca sativa HOM05D003394 ORTHO05D004183 3.0e-53 212.2 160 68.8
ECA233G1391 Erigeron canadensis HOM05D003394 ORTHO05D004183 5.1e-53 211.5 160 70.6
A09p58950 Brassica napus HOM05D003394 ORTHO05D004183 6.7e-53 211.1 157 81.5
PSO339G1296 Papaver somniferum HOM05D003394 ORTHO05D004183 6.7e-53 211.1 162 71.6
Sc01g0003650 Simmondsia chinensis HOM05D003394 ORTHO05D004183 6.7e-53 211.1 160 85.0
Migut.L01654 Erythranthe guttata HOM05D003394 ORTHO05D004183 8.8e-53 210.7 161 68.9
EL10Ac7g17330 Beta vulgaris HOM05D003394 ORTHO05D004183 1.1e-52 210.3 159 84.3
FvH4_7g20460 Fragaria vesca HOM05D003394 ORTHO05D004183 1.1e-52 210.3 160 74.4
MD01G1113600 Malus domestica HOM05D003394 ORTHO05D004183 1.1e-52 210.3 161 89.4
Phvul.007G162750 Phaseolus vulgaris HOM05D003394 ORTHO05D004183 1.1e-52 210.3 160 86.9
Ah.08g211990 Amaranthus hybridus HOM05D003394 ORTHO05D004183 1.5e-52 209.9 160 85.6
ECA232G1617 Erigeron canadensis HOM05D003394 ORTHO05D004183 1.5e-52 209.9 160 86.2
MD07G1181600 Malus domestica HOM05D003394 ORTHO05D004183 1.5e-52 209.9 160 88.8
PSO384G0969 Papaver somniferum HOM05D003394 ORTHO05D004183 1.5e-52 209.9 162 71.6
Lj5g0004676 Lotus japonicus HOM05D003394 ORTHO05D004183 2.0e-52 209.5 160 83.8
MSTRG.26735 Avicennia marina HOM05D003394 ORTHO05D004183 4.3e-52 208.4 164 76.8
Nitab4.5_0000848g0130 Nicotiana tabacum HOM05D003394 ORTHO05D004183 4.3e-52 208.4 163 72.4
DCAR_019147 Daucus carota HOM05D003394 ORTHO05D004183 5.7e-52 208.0 163 67.5
FAN01G1405 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.7e-52 208.0 160 77.5
FAN03G2813 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.7e-52 208.0 160 75.0
FAN06G0926 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.7e-52 208.0 160 75.0
FAN06G2221 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.7e-52 208.0 160 75.0
Nitab4.5_0006316g0020 Nicotiana tabacum HOM05D003394 ORTHO05D004183 5.7e-52 208.0 164 72.0
Sabra08G0031900 Salix brachista HOM05D003394 ORTHO05D004183 7.4e-52 207.6 161 85.1
PGSC0003DMG400027902 Solanum tuberosum HOM05D003394 ORTHO05D004183 7.4e-52 207.6 163 66.9
Gohir.D01G206800 Gossypium hirsutum HOM05D003394 ORTHO05D004183 9.7e-52 207.2 160 80.6
Prupe.6G243000 Prunus persica HOM05D003394 ORTHO05D004183 9.7e-52 207.2 160 85.6
C08p42270 Brassica napus HOM05D003394 ORTHO05D004183 1.3e-51 206.8 153 81.7
C09p15140 Brassica napus HOM05D003394 ORTHO05D004183 1.3e-51 206.8 189 65.1
Gorai.002G251700 Gossypium raimondii HOM05D003394 ORTHO05D004183 1.3e-51 206.8 160 80.0
SEGI_02269 Sequoiadendron giganteum HOM05D003394 ORTHO05D004183 1.7e-51 206.5 159 84.9
SGA_v2.0_scaffold35G14175 Striga asiatica HOM05D003394 ORTHO05D004183 1.7e-51 206.5 162 84.6
AUR62040529 Chenopodium quinoa HOM05D003394 ORTHO05D004183 1.1e-50 203.8 161 85.1
SGA_v2.0_scaffold94G28659 Striga asiatica HOM05D003394 ORTHO05D004183 1.1e-50 203.8 162 84.6
Gohir.A01G217900 Gossypium hirsutum HOM05D003394 ORTHO05D004183 1.4e-50 203.4 160 78.8
Solyc09g007230.3 Solanum lycopersicum HOM05D003394 ORTHO05D004183 1.4e-50 203.4 163 79.1
Sopen09g002100 Solanum pennellii HOM05D003394 ORTHO05D004183 1.4e-50 203.4 163 79.1
Aa31LG8G17270 Aethionema arabicum HOM05D003394 ORTHO05D004183 1.8e-50 203.0 161 82.0
FAN10G3966 Fragaria x ananassa HOM05D003394 ORTHO05D004183 6.9e-50 201.1 170 67.1
Lj3C977T6 Lonicera japonica HOM05D003394 ORTHO05D004183 6.9e-50 201.1 165 72.1
Peaxi162Scf00005g05117 Petunia axillaris HOM05D003394 ORTHO05D004183 9.1e-50 200.7 162 82.1
Migut.J00405 Erythranthe guttata HOM05D003394 ORTHO05D004183 4.5e-49 198.4 164 65.9
SalBow3G4124 Salvia bowleyana HOM05D003394 ORTHO05D004183 1.0e-48 197.2 163 71.8
SMO358G0089 Selaginella moellendorffii HOM05D003394 ORTHO05D004183 2.9e-48 195.7 171 66.1
Pp3c6_18260 Physcomitrium patens HOM05D003394 ORTHO05D004183 5.0e-48 194.9 162 67.9
CAN.G350.44 Capsicum annuum HOM05D003394 ORTHO05D004183 1.1e-47 193.7 163 80.4
COL.COLO4_27101 Corchorus olitorius HOM05D003394 ORTHO05D004183 1.1e-47 193.7 160 65.0
AagrBONN_evm.TU.Sc2ySwM_344.1346 Anthoceros agrestis HOM05D003394 ORTHO05D004183 7.2e-47 191.0 161 65.2
Mapoly0100s0024 Marchantia polymorpha HOM05D003394 ORTHO05D004183 1.6e-46 189.9 161 65.2
Pp3c25_2690 Physcomitrium patens HOM05D003394 ORTHO05D004183 2.1e-46 189.5 162 66.7
CBR_g30214 Chara braunii HOM05D003394 ORTHO05D004183 1.0e-45 187.2 177 59.9
Cpa.g.sc1.277 Carica papaya HOM05D003394 ORTHO05D004183 7.4e-44 181.0 130 70.8
AagrBONN_evm.TU.Sc2ySwM_344.1347 Anthoceros agrestis HOM05D003394 ORTHO05D004183 2.8e-43 179.1 157 59.9
FAN10G3299 Fragaria x ananassa HOM05D003394 ORTHO05D004183 5.3e-42 174.9 95 90.5
Eucgr.A01194 Eucalyptus grandis HOM05D003394 ORTHO05D004183 2.6e-41 172.6 94 87.2
Lj8A94G44 Lonicera japonica HOM05D003394 ORTHO05D004183 1.1e-39 167.2 160 70.6
Sabra06G0104300 Salix brachista HOM05D003394 ORTHO05D004183 3.2e-39 165.6 160 66.2
TAR636G1965 Trochodendron aralioides HOM05D003394 ORTHO05D004183 3.2e-39 165.6 113 74.3
Nitab4.5_0003820g0050 Nicotiana tabacum HOM05D003394 ORTHO05D004183 6.7e-37 157.9 95 78.9
Nn2g10616 Nelumbo nucifera HOM05D003394 ORTHO05D004183 1.8e-34 149.8 75 93.3
Lalb_Chr06g0171311 Lupinus albus HOM05D003394 ORTHO05D004183 4.5e-33 145.2 70 98.6
Cre01.g014050 Chlamydomonas reinhardtii HOM05D003394 ORTHO05D004183 4.0e-29 132.1 172 48.8
HanXRQChr05g0152201 Helianthus annuus HOM05D003394 ORTHO05D004183 5.2e-29 131.7 74 83.8
HanXRQChr03g0062601 Helianthus annuus HOM05D003394 ORTHO05D004183 1.2e-28 130.6 74 82.4
HanXRQChr13g0395701 Helianthus annuus HOM05D003394 ORTHO05D004183 2.0e-28 129.8 74 82.4
CiPaw.09G181800 Carya illinoinensis HOM05D003394 ORTHO05D004183 6.3e-27 124.8 159 57.9
Dinv37240 Davidia involucrata HOM05D003394 ORTHO05D004183 6.3e-27 124.8 114 62.3
MCO09G666 Micromonas commoda HOM05D003394 ORTHO05D004183 2.7e-22 109.4 161 38.5
Ca_02310_v3 Cicer arietinum L. HOM05D003394 ORTHO05D004183 2.0e-20 103.2 159 43.4
COL.COLO4_23774 Corchorus olitorius HOM05D003394 ORTHO05D004183 9.8e-20 100.9 162 48.8
Nitab4.5_0016592g0010 Nicotiana tabacum HOM05D003394 ORTHO05D286500 7.7e-17 91.3 44 90.9
AUR62042915 Chenopodium quinoa HOM05D003394 ORTHO05D004183 1.0e-16 90.9 161 58.4
Cfa022263 Carpinus fangiana HOM05D003394 ORTHO05D004183 4.7e-14 82.0 94 46.8
HanXRQChr17g0559121 Helianthus annuus HOM05D003394 ORTHO05D046728 3.4e-12 75.9 84 53.6
Glyma.19G177767 Glycine max HOM05D003394 ORTHO05D046728 7.5e-12 74.7 83 54.2
Cfa017491 Carpinus fangiana HOM05D003394 ORTHO05D004183 1.3e-11 73.9 42 83.3
MCO05G145 Micromonas commoda HOM05D000681 ORTHO05D003832 2.9e-11 72.8 96 45.8
Oeu060080.1 Olea europaea HOM05D003394 ORTHO05D287472 4.3e-07 58.9 31 90.3
TAR636G0680 Trochodendron aralioides HOM05D003394 ORTHO05D004183 5.6e-07 58.5 92 41.3


User provided reference genes

Program Settings