Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 0.0e+00 1206.4 667 100.0
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 1.3e-184 650.6 683 59.6
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 1.5e-143 514.2 705 51.1
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 1.6e-137 494.2 695 50.9
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 7.6e-132 475.3 699 48.5
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 3.9e-128 463.0 710 48.2
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 1.4e-125 454.5 703 48.9
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 1.9e-114 417.5 707 49.5
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 5.6e-111 406.0 710 43.0
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 5.8e-108 396.0 712 42.6
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 8.4e-107 392.1 718 41.1
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 1.2e-105 388.3 739 43.3
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 2.7e-105 387.1 716 45.0
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 4.6e-105 386.3 708 41.5
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 4.6e-105 386.3 720 43.2
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 1.0e-104 385.2 712 39.0
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 1.3e-104 384.8 731 42.5
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 1.5e-103 381.3 702 44.7
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 8.2e-102 375.6 712 42.7
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 8.2e-102 375.6 700 42.0
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 2.4e-101 374.0 732 40.7
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 1.5e-100 371.3 715 44.3
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 1.7e-99 367.9 728 41.5
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 5.0e-99 366.3 699 44.1
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 6.5e-99 365.9 726 42.0
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 8.5e-99 365.5 715 41.5
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 1.9e-98 364.4 707 44.3
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 5.5e-98 362.8 705 40.7
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 1.6e-97 361.3 739 41.4
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 3.6e-97 360.1 695 41.0
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 6.1e-97 359.4 733 40.2
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.1e-95 355.1 714 41.6
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 4.8e-94 349.7 702 40.7
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 6.3e-94 349.4 715 39.9
Sopen07g030960 Solanum pennellii HOM05D004118 ORTHO05D004686 8.2e-94 349.0 691 41.5
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 3.1e-93 347.1 734 39.6
Peaxi162Scf00000g00285 Petunia axillaris HOM05D004118 ORTHO05D004686 6.9e-93 345.9 698 41.7
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 1.2e-92 345.1 731 43.2
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.2e-92 345.1 713 40.5
DCAR_021002 Daucus carota HOM05D004118 ORTHO05D004686 2.0e-92 344.4 754 37.9
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 1.9e-90 337.8 720 39.9
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 4.2e-90 336.7 715 41.5
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 5.5e-90 336.3 722 40.0
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 5.5e-90 336.3 736 40.1
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 6.1e-89 332.8 691 42.0
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.4e-88 331.6 710 39.9
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 3.0e-88 330.5 712 40.6
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 3.0e-88 330.5 705 38.0
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 3.9e-88 330.1 686 39.8
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 3.9e-88 330.1 722 41.3
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 3.3e-87 327.0 732 41.7
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 1.1e-85 322.0 772 37.7
SGA_v2.0_scaffold73G24222 Striga asiatica HOM05D004118 ORTHO05D004686 2.4e-85 320.9 728 40.2
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 6.9e-85 319.3 681 40.8
RcHm_v2.0_Chr5g0032241 Rosa chinensis HOM05D004118 ORTHO05D004686 9.1e-85 318.9 702 40.5
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 2.6e-84 317.4 750 40.5
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 2.6e-84 317.4 625 40.3
MSTRG.12889 Avicennia marina HOM05D004118 ORTHO05D004686 4.5e-84 316.6 713 39.0
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 1.0e-83 315.5 685 42.5
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 3.8e-83 313.5 717 39.7
Cc05_g11580 Coffea canephora HOM05D004118 ORTHO05D004686 8.5e-83 312.4 815 37.3
MSTRG.15246 Avicennia marina HOM05D004118 ORTHO05D004686 3.2e-82 310.5 712 38.9
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 4.2e-82 310.1 705 37.9
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.2e-81 308.5 692 39.3
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 2.7e-81 307.4 700 39.3
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 1.0e-80 305.4 693 37.4
Nitab4.5_0003033g0050 Nicotiana tabacum HOM05D004118 ORTHO05D004686 2.3e-80 304.3 690 38.8
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 2.0e-79 301.2 696 40.8
Nitab4.5_0000332g0190 Nicotiana tabacum HOM05D004118 ORTHO05D004686 9.7e-79 298.9 692 38.4
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 4.8e-78 296.6 694 38.2
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 1.8e-77 294.7 609 40.4
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 2.6e-76 290.8 736 40.6
Sopen12g005780 Solanum pennellii HOM05D004118 ORTHO05D004686 5.9e-76 289.7 687 37.6
arahy.Tifrunner.gnm1.ann1.YMW7LF Arachis hypogaea HOM05D004118 ORTHO05D004686 5.5e-74 283.1 703 37.4
Gohir.D01G046700 Gossypium hirsutum HOM05D004118 ORTHO05D004686 5.5e-74 283.1 673 38.0
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 9.4e-74 282.3 662 41.2
CSS0009782 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.2e-73 282.0 639 38.5
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 1.6e-73 281.6 675 39.1
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 2.1e-73 281.2 677 35.9
Oeu019296.1 Olea europaea HOM05D004118 ORTHO05D004686 9.7e-71 272.3 712 38.9
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 1.1e-69 268.9 707 35.6
ECA236G3195 Erigeron canadensis HOM05D004118 ORTHO05D004686 2.4e-69 267.7 711 36.3
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.2e-68 265.4 670 36.4
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 4.5e-68 263.5 699 35.9
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 1.7e-67 261.5 714 35.4
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 5.0e-67 260.0 705 33.8
Hma1.2p1_0313F.1_g121640 Hydrangea macrophylla HOM05D004118 ORTHO05D004686 5.0e-67 260.0 671 38.0
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 6.5e-67 259.6 667 34.9
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 6.5e-67 259.6 742 35.0
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 1.5e-66 258.5 714 35.4
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 7.2e-66 256.1 691 35.9
vmacro11898 Vaccinium macrocarpon HOM05D004118 ORTHO05D004686 3.6e-65 253.8 700 38.4
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 4.7e-65 253.4 709 36.4
Rhsim06G0203400 Rhododendron simsii HOM05D004118 ORTHO05D004686 6.1e-65 253.1 690 34.3
Thhalv10020211m.g Eutrema salsugineum HOM05D004118 ORTHO05D004686 1.0e-64 252.3 704 37.1
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 7.5e-63 246.1 694 38.5
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 1.3e-62 245.4 718 35.5
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 2.8e-62 244.2 303 52.1
ECA240G2123 Erigeron canadensis HOM05D004118 ORTHO05D004686 6.3e-62 243.0 723 34.0
unitig_37.g12565 Utricularia gibba HOM05D004118 ORTHO05D004686 9.1e-61 239.2 706 35.7
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 1.3e-59 235.3 625 34.9
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 8.5e-59 232.6 775 33.3
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 8.5e-59 232.6 655 33.3
Lsat_1_v5_gn_5_128820 Lactuca sativa HOM05D004118 ORTHO05D004686 1.5e-58 231.9 707 37.9
EL10Ac4g08266 Beta vulgaris HOM05D004118 ORTHO05D004686 7.2e-58 229.6 736 36.5
DCAR_019575 Daucus carota HOM05D004118 ORTHO05D004686 2.8e-57 227.6 647 33.4
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 6.8e-56 223.0 719 35.5
AL3G27450 Arabidopsis lyrata HOM05D004118 ORTHO05D004686 1.5e-55 221.9 712 33.6
ECA234G1224 Erigeron canadensis HOM05D004118 ORTHO05D004686 2.0e-55 221.5 721 34.8
AUR62036141 Chenopodium quinoa HOM05D004118 ORTHO05D004686 2.6e-55 221.1 729 35.9
Ah.06g194460 Amaranthus hybridus HOM05D004118 ORTHO05D004686 3.4e-55 220.7 694 33.7
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 4.4e-55 220.3 740 32.3
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 2.4e-53 214.5 706 35.7
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 2.4e-53 214.5 685 35.8
unitig_747.g21581 Utricularia gibba HOM05D004118 ORTHO05D004686 1.7e-51 208.4 714 34.6
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 5.0e-51 206.8 730 33.6
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 5.6e-50 203.4 702 30.9
arahy.Tifrunner.gnm1.ann1.82B0EJ Arachis hypogaea HOM05D004118 ORTHO05D004686 2.3e-48 198.0 612 34.0
Lalb_Chr19g0134031 Lupinus albus HOM05D004118 ORTHO05D004686 2.0e-47 194.9 678 30.2
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 9.8e-47 192.6 690 31.2
BcaC09g48474 Brassica carinata HOM05D004118 ORTHO05D004686 1.4e-45 188.7 667 32.2
HPP92_002942 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.8e-45 188.3 721 31.1
C01p49420 Brassica napus HOM05D004118 ORTHO05D004686 2.4e-45 188.0 667 31.9
BolC1t04899H Brassica oleracea HOM05D004118 ORTHO05D004686 2.4e-45 188.0 650 32.3
Solyc12g014040.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 2.4e-45 188.0 233 50.6
THA.LOC104798758 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 2.0e-44 184.9 610 35.6
GSVIVG01014262001 Vitis vinifera HOM05D004118 ORTHO05D003395 2.7e-44 184.5 588 34.2
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 3.5e-44 184.1 709 31.3
Zm00001eb014970 Zea mays HOM05D004118 ORTHO05D004686 3.0e-43 181.0 814 30.3
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 5.0e-43 180.3 652 29.9
Lalb_Chr03g0030811 Lupinus albus HOM05D004118 ORTHO05D004686 5.2e-40 170.2 673 31.8
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 1.2e-39 169.1 341 39.9
Gohir.D08G032400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 7.5e-39 166.4 655 30.1
Zm00001eb395950 Zea mays HOM05D004118 ORTHO05D004686 1.7e-38 165.2 791 31.1
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 2.9e-38 164.5 614 32.7
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 4.9e-38 163.7 689 31.6
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 6.4e-38 163.3 614 32.7
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 6.4e-38 163.3 614 32.7
Gorai.004G029800 Gossypium raimondii HOM05D004118 ORTHO05D004686 2.4e-37 161.4 656 30.3
Os06g0352900 Oryza sativa ssp. japonica HOM05D004118 ORTHO05D004686 7.0e-37 159.8 820 30.9
PSO675G3813 Papaver somniferum HOM05D004118 ORTHO05D004686 2.7e-36 157.9 370 38.1
Lsat_1_v5_gn_4_172920 Lactuca sativa HOM05D004118 ORTHO05D004686 6.0e-36 156.8 220 50.0
SGA_v2.0_scaffold70G23697 Striga asiatica HOM05D004118 ORTHO05D004686 3.0e-35 154.5 639 32.6
HPP92_003871 Vanilla planifolia HOM05D004118 ORTHO05D004686 8.6e-35 152.9 712 30.1
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 8.1e-33 146.4 610 30.7
Atru.chr2.2380 Acer truncatum HOM05D004118 ORTHO05D004686 1.4e-32 145.6 236 44.9
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 8.9e-32 142.9 604 30.6
HPP92_003895 Vanilla planifolia HOM05D004118 ORTHO05D004686 2.7e-28 131.3 345 36.2
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 5.1e-27 127.1 697 27.5
SGA_v2.0_scaffold130G34343 Striga asiatica HOM05D004118 ORTHO05D004686 5.1e-27 127.1 684 27.6
Lj1P837T15 Lonicera japonica HOM05D004118 ORTHO05D004686 1.5e-26 125.6 100 72.0
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 2.5e-26 124.8 452 31.6
Lsat_1_v5_gn_1_36460 Lactuca sativa HOM05D004118 ORTHO05D004686 4.3e-26 124.0 154 51.3
Cc04_g12070 Coffea canephora HOM05D004118 ORTHO05D004686 7.1e-21 106.7 120 50.8
AUR62019494 Chenopodium quinoa HOM05D004118 ORTHO05D004686 5.1e-19 100.5 444 33.8
Actinidia33372 Actinidia chinensis HOM05D004118 ORTHO05D004686 1.9e-18 98.6 101 59.4
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 4.3e-18 97.4 445 32.8
Cfa006262 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.1e-17 95.1 104 51.9
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 2.8e-17 94.7 121 48.8
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 6.2e-17 93.6 252 35.3
Nn1g06377 Nelumbo nucifera HOM05D004118 ORTHO05D004686 6.9e-16 90.1 254 33.1
SEGI_02629 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 1.5e-15 89.0 308 29.5
HanXRQChr12g0372791 Helianthus annuus HOM05D004118 ORTHO05D004686 1.3e-14 85.9 155 36.8
CAN.G329.5 Capsicum annuum HOM05D004118 ORTHO05D004686 1.4e-13 82.4 280 31.1
HPP92_003896 Vanilla planifolia HOM05D004118 ORTHO05D004686 9.3e-13 79.7 134 35.8
CDE10G0292 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 1.6e-12 79.0 684 25.4
Lsat_1_v5_gn_5_162921 Lactuca sativa HOM05D004118 ORTHO05D004686 7.8e-12 76.6 75 57.3
CDE10G0599 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 1.5e-10 72.4 262 28.2
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 1.5e-10 72.4 309 32.4
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 7.3e-10 70.1 314 26.1
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.4e-08 65.1 311 27.7
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 3.1e-08 64.7 321 26.8
CDE02G0061 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 6.9e-08 63.5 128 36.7
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 6.9e-08 63.5 306 31.0
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 6.9e-08 63.5 306 27.5
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 9.0e-08 63.2 317 28.1
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 2.0e-07 62.0 294 27.9
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 5.8e-07 60.5 314 29.0
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 2.2e-06 58.5 263 27.4
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 4.9e-06 57.4 299 27.4
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 4.9e-06 57.4 250 28.0
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 8.4e-06 56.6 350 27.4
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 8.4e-06 56.6 303 27.4


User provided reference genes

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