Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 0.0e+00 1237.2 611 100.0
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.6e-221 773.1 609 65.0
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 1.4e-220 770.0 589 67.4
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 9.8e-219 763.8 609 65.4
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 8.6e-215 750.7 588 65.5
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.7e-208 729.2 603 61.5
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.5e-203 713.4 616 60.1
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 7.8e-200 701.0 631 60.4
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 1.8e-196 689.9 617 60.0
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.3e-186 657.1 604 56.6
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 1.9e-182 643.3 635 55.9
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 3.9e-175 619.0 577 56.3
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.6e-152 543.9 612 49.3
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 2.1e-149 533.5 659 47.0
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.7e-146 523.9 610 49.3
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 9.3e-145 518.1 459 58.8
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 4.3e-142 509.2 497 55.7
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 1.1e-137 494.6 593 46.4
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 4.1e-132 476.1 590 45.4
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.9e-129 467.2 622 44.2
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 2.7e-128 463.4 574 47.0
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 7.9e-128 461.8 599 44.2
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 4.8e-125 452.6 617 44.1
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 5.3e-124 449.1 606 42.4
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 9.1e-124 448.4 418 59.1
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 3.5e-123 446.4 626 42.5
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.5e-123 446.0 611 44.4
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 3.6e-120 436.4 573 45.4
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 6.1e-120 435.6 605 42.6
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.3e-119 433.7 608 42.8
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 3.0e-119 433.3 677 39.7
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.5e-118 431.0 635 41.1
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 4.4e-118 429.5 613 43.4
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 4.4e-118 429.5 618 40.6
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.3e-117 427.9 626 42.8
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 2.8e-117 426.8 594 42.3
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 1.1e-116 424.9 617 43.3
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 3.1e-116 423.3 605 43.0
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 4.1e-116 422.9 716 38.5
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.2e-115 421.4 610 42.0
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.2e-115 421.4 609 43.0
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 2.6e-115 420.2 680 39.0
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 7.7e-115 418.7 623 40.1
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.7e-114 417.5 573 43.6
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 9.4e-113 411.8 622 39.9
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 2.1e-112 410.6 573 43.1
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 8.0e-112 408.7 573 43.1
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 1.0e-111 408.3 599 43.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 1.8e-111 407.5 617 41.5
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 8.8e-111 405.2 602 39.9
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 1.5e-110 404.4 606 42.1
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.5e-110 404.4 595 40.2
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 7.0e-108 395.6 615 40.0
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 7.0e-108 395.6 637 40.2
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 1.2e-107 394.8 626 38.3
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 3.5e-107 393.3 619 39.4
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 4.5e-107 392.9 605 40.3
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 7.7e-107 392.1 620 39.5
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 1.3e-106 391.3 607 39.0
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 5.0e-106 389.4 615 39.3
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 6.5e-106 389.0 611 38.6
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 6.8e-103 379.0 415 53.3
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 2.4e-100 370.5 636 39.8
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 3.1e-100 370.2 532 41.4
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 4.1e-100 369.8 611 39.1
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 6.6e-98 362.5 583 40.3
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.1e-97 361.7 615 38.0
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 3.6e-96 356.7 584 38.0
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 3.6e-96 356.7 500 43.2
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 4.4e-94 349.7 618 38.5
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 9.8e-94 348.6 608 37.0
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 3.2e-92 343.6 613 35.1
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.0e-90 338.6 634 35.3
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 1.1e-89 335.1 583 36.2
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 6.4e-85 319.3 555 36.6
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.4e-84 318.2 527 39.1
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 2.4e-84 317.4 584 36.8
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.0e-83 314.3 621 33.5
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 3.5e-83 313.5 435 44.1
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.8e-80 303.9 505 39.2
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 8.9e-79 298.9 692 32.7
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 2.6e-78 297.4 590 34.6
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.7e-77 294.7 567 35.8
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 2.2e-77 294.3 648 33.2
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 3.7e-77 293.5 578 34.8
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 5.1e-74 283.1 613 33.3
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.9e-73 281.2 609 34.3
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 2.1e-72 277.7 417 42.9
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 2.1e-72 277.7 273 54.9
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 6.2e-72 276.2 487 38.4
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.8e-71 274.6 589 34.8
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 9.2e-68 262.3 615 32.7
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 4.6e-67 260.0 570 34.6
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 2.5e-65 254.2 595 32.3
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 7.3e-65 252.7 575 33.0
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 7.3e-65 252.7 575 33.0
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 9.6e-65 252.3 218 56.0
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 9.6e-65 252.3 567 32.6
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 9.6e-65 252.3 595 32.1
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 2.1e-64 251.1 575 32.7
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 4.0e-63 246.9 575 32.5
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.7e-61 241.5 574 33.3
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 9.3e-60 235.7 362 39.8
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 1.7e-58 231.5 233 53.6
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.9e-58 230.3 567 32.5
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 5.1e-58 229.9 559 30.2
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 6.6e-58 229.6 574 30.0
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.5e-57 227.6 252 45.6
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 2.8e-56 224.2 601 29.8
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 2.2e-53 214.5 475 32.8
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 8.4e-53 212.6 333 38.4
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.3e-48 198.7 299 39.5
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.1e-44 185.7 282 38.3
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 7.9e-43 179.5 454 30.2
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 2.3e-42 177.9 168 51.2
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.8e-39 168.3 282 36.9
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 2.6e-38 164.5 447 32.2
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 3.8e-37 160.6 240 40.8
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 4.9e-37 160.2 534 27.3
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 1.6e-35 155.2 151 52.3
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 6.0e-35 153.3 293 35.5
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 2.3e-34 151.4 161 48.4
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 2.5e-33 147.9 172 42.4
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 2.5e-33 147.9 151 51.0
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-32 144.8 232 36.6
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 6.2e-32 143.3 231 36.4
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.4e-31 142.1 571 23.8
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 1.5e-30 138.7 162 45.1
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 7.6e-30 136.3 640 23.3
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.1e-25 122.5 138 47.8
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 1.2e-22 112.5 159 40.3
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.2e-22 112.5 277 34.3
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.5e-20 104.8 331 25.7
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 8.8e-18 96.3 137 38.0
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 3.3e-17 94.4 326 24.8
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 5.0e-13 80.5 295 26.1
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 6.3e-08 63.5 294 23.1
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.5e-06 58.9 73 37.0


User provided reference genes

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