Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 3.1e-78 295.0 148 100.0
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 3.4e-24 115.5 139 52.5
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 4.9e-23 111.7 140 52.1
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 6.4e-23 111.3 151 46.4
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 9.2e-22 107.5 147 41.5
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 3.9e-20 102.1 154 42.9
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 1.3e-15 87.0 133 45.1
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 1.9e-14 83.2 150 44.7
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 1.2e-13 80.5 130 43.8
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 1.2e-13 80.5 129 47.3
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 6.0e-13 78.2 133 48.1
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 6.0e-13 78.2 122 49.2
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 6.6e-12 74.7 121 46.3
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 6.6e-12 74.7 128 45.3
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 5.6e-11 71.6 137 39.4
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 2.8e-10 69.3 135 38.5
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 2.8e-10 69.3 115 37.4
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 3.6e-10 68.9 140 37.9
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 3.6e-10 68.9 111 43.2
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 2.4e-09 66.2 130 44.6
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.4e-09 66.2 134 33.6
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 4.0e-09 65.5 105 38.1
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.0e-09 65.5 105 38.1
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 5.2e-09 65.1 138 36.2
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 5.2e-09 65.1 152 32.2
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 5.2e-09 65.1 105 38.1
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.5e-08 63.5 105 37.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 5.8e-08 61.6 153 31.4
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 7.6e-08 61.2 138 35.5
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 4.9e-07 58.5 128 35.2
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.4e-06 56.2 128 29.7
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 4.2e-06 55.5 133 27.1
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 7.1e-06 54.7 126 31.0


User provided reference genes

Program Settings