Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 2.8e-68 261.9 144 100.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 6.2e-47 191.0 142 74.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.5e-45 186.4 141 73.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 6.4e-44 181.0 139 71.2
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.1e-42 176.0 132 75.0
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.7e-42 175.6 139 70.5
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 3.5e-42 175.3 139 71.2
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 4.6e-42 174.9 111 81.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 9.5e-40 167.2 104 82.7
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 8.1e-39 164.1 139 68.3
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 9.2e-35 150.6 137 63.5
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-34 149.8 137 61.3
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-34 149.8 137 61.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.7e-34 149.1 144 61.1
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.6e-34 148.3 138 63.8
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 2.3e-33 146.0 100 77.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 5.1e-33 144.8 143 58.0
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 8.6e-33 144.1 130 66.2
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.5e-32 143.3 130 68.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.9e-32 142.9 131 64.1
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.5e-32 142.5 94 79.8
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 2.5e-32 142.5 127 62.2
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 4.3e-32 141.7 131 63.4
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 4.3e-32 141.7 138 60.9
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 5.6e-32 141.4 139 59.0
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 7.3e-32 141.0 128 64.1
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 7.3e-32 141.0 137 60.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 9.5e-32 140.6 131 62.6
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.7e-31 138.3 132 60.6
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.1e-30 137.1 121 62.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.4e-30 136.7 139 55.4
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.8e-30 136.3 130 58.5
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 2.4e-30 136.0 139 56.1
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 4.0e-30 135.2 137 57.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.0e-30 135.2 126 57.9
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.0e-30 135.2 126 57.9
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 4.0e-30 135.2 132 57.6
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.8e-30 134.4 127 61.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-29 133.7 119 60.5
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-29 133.3 126 57.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.5e-29 133.3 124 62.9
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.0e-29 132.9 135 55.6
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.0e-29 132.9 105 66.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.6e-29 132.5 136 55.1
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.4e-29 132.1 105 65.7
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 4.4e-29 131.7 123 59.3
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 5.8e-29 131.3 91 74.7
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.9e-28 129.0 132 57.6
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.8e-28 128.6 100 62.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 3.8e-28 128.6 142 52.1
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 3.8e-28 128.6 94 69.1
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.9e-28 128.3 139 55.4
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 4.9e-28 128.3 105 62.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 6.4e-28 127.9 119 60.5
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 8.4e-28 127.5 139 55.4
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.1e-27 127.1 102 65.7
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.1e-27 127.1 96 69.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.9e-27 126.3 101 60.4
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 4.1e-27 125.2 100 67.0
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 5.4e-27 124.8 137 51.8
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-27 124.4 138 54.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.2e-26 123.6 142 50.7
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.2e-26 123.6 138 52.9
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.1e-26 122.9 137 51.1
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.7e-26 122.5 128 53.1
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 3.5e-26 122.1 138 50.0
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 3.5e-26 122.1 106 58.5
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 4.6e-26 121.7 98 66.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 6.0e-26 121.3 87 73.6
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.8e-26 120.9 134 53.7
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.3e-25 119.4 130 50.8
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 3.0e-25 119.0 136 51.5
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 3.9e-25 118.6 101 56.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.9e-25 118.6 101 56.4
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 5.1e-25 118.2 95 65.3
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 5.1e-25 118.2 89 69.7
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 6.6e-25 117.9 141 47.5
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 8.7e-25 117.5 105 58.1
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-24 117.1 122 50.8
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.1e-24 117.1 140 48.6
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 3.3e-24 115.5 129 50.4
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.3e-24 115.2 134 47.0
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 4.3e-24 115.2 128 47.7
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 7.3e-24 114.4 134 50.7
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.2e-23 113.6 91 60.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 1.6e-23 113.2 94 57.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 2.1e-23 112.8 141 47.5
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 3.6e-23 112.1 130 51.5
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 6.2e-23 111.3 163 46.0
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-22 110.5 111 52.3
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.1e-22 110.5 126 50.8
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.4e-22 110.2 124 49.2
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 5.2e-22 108.2 121 50.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 6.9e-22 107.8 106 52.8
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 9.0e-22 107.5 85 58.8
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 9.0e-22 107.5 89 61.8
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.0e-21 106.3 107 53.3
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 5.8e-21 104.8 77 71.4
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.9e-20 101.7 155 40.6
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.1e-19 100.5 59 84.7
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.9e-19 99.8 113 46.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.2e-19 99.0 116 52.6
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.7e-18 95.9 94 53.2
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-17 94.0 93 48.4
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.5e-16 90.1 98 46.9
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 2.5e-16 89.4 117 43.6
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 5.6e-16 88.2 107 51.4
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 9.6e-16 87.4 87 55.2
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 1.6e-15 86.7 75 65.3
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.0e-14 82.0 93 52.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 5.3e-14 81.6 102 46.1
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.0e-13 79.7 188 35.1
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 2.4e-11 72.8 92 39.1
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 1.3e-07 60.5 74 55.4


User provided reference genes

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