Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.3e-54 216.1 105 100.0
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 1.6e-20 102.8 104 55.8
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 3.4e-18 95.1 104 51.9
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 3.4e-18 95.1 104 53.8
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 7.5e-18 94.0 104 51.0
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 1.7e-17 92.8 105 48.6
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 2.8e-17 92.0 103 51.5
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 3.7e-17 91.7 105 51.4
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 3.7e-17 91.7 107 48.6
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 4.8e-17 91.3 106 48.1
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 8.3e-17 90.5 103 49.5
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 1.1e-16 90.1 104 50.0
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.4e-16 89.7 105 49.5
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.4e-16 89.7 105 49.5
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 1.4e-16 89.7 104 50.0
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.4e-16 89.7 104 50.0
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 3.1e-16 88.6 107 47.7
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 3.1e-16 88.6 103 49.5
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 4.1e-16 88.2 104 49.0
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 4.1e-16 88.2 104 49.0
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 4.1e-16 88.2 103 46.6
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 5.4e-16 87.8 103 48.5
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 5.4e-16 87.8 103 48.5
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 7.0e-16 87.4 103 48.5
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 7.0e-16 87.4 103 48.5
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 9.1e-16 87.0 104 45.2
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 1.2e-15 86.7 103 45.6
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 1.2e-15 86.7 103 47.6
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 1.6e-15 86.3 104 47.1
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 2.0e-15 85.9 103 46.6
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 2.0e-15 85.9 106 44.3
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.7e-15 85.5 103 46.6
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 4.5e-15 84.7 103 45.6
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.9e-15 84.3 102 47.1
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 5.9e-15 84.3 103 45.6
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 7.7e-15 84.0 103 44.7
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 7.7e-15 84.0 103 44.7
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 7.7e-15 84.0 105 44.8
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 1.0e-14 83.6 102 47.1
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 1.3e-14 83.2 103 46.6
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 1.7e-14 82.8 103 42.7
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.7e-14 82.8 103 44.7
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 1.7e-14 82.8 103 45.6
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 2.2e-14 82.4 104 48.1
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 2.9e-14 82.0 104 43.3
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 3.8e-14 81.6 103 45.6
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 3.8e-14 81.6 103 45.6
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 5.0e-14 81.3 103 48.5
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 5.0e-14 81.3 105 45.7
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 6.5e-14 80.9 103 42.7
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 8.5e-14 80.5 103 46.6
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 8.5e-14 80.5 103 46.6
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 8.5e-14 80.5 103 46.6
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 1.1e-13 80.1 103 42.7
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 1.1e-13 80.1 80 53.8
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 42.7
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 44.7
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 44.7
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 44.7
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 47.6
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 1.9e-13 79.3 103 44.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.5e-13 79.0 103 44.7
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 2.5e-13 79.0 127 42.5
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 3.2e-13 78.6 103 42.7
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 3.2e-13 78.6 103 42.7
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 3.2e-13 78.6 106 41.5
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 4.2e-13 78.2 102 44.1
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 4.2e-13 78.2 103 42.7
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 4.2e-13 78.2 104 42.3
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 7.2e-13 77.4 103 41.7
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 7.2e-13 77.4 103 42.7
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 1.2e-12 76.6 128 35.9
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 1.2e-12 76.6 128 35.9
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 1.6e-12 76.3 103 40.8
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 2.1e-12 75.9 103 41.7
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 2.7e-12 75.5 95 45.3
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 2.7e-12 75.5 103 42.7
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 2.7e-12 75.5 103 39.8
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 3.6e-12 75.1 128 35.9
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 6.1e-12 74.3 110 40.9
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 8.0e-12 73.9 128 35.2
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 1.0e-11 73.6 105 41.9
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.0e-11 73.6 95 46.3
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 1.0e-11 73.6 103 40.8
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.0e-11 73.6 103 41.7
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 1.0e-11 73.6 103 42.7
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.0e-11 73.6 119 41.2
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 1.8e-11 72.8 103 43.7
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.8e-11 72.8 96 43.8
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 2.3e-11 72.4 103 39.8
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 2.3e-11 72.4 105 41.9
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 2.3e-11 72.4 129 36.4
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 3.0e-11 72.0 105 39.0
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 4.0e-11 71.6 94 42.6
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 5.2e-11 71.2 103 39.8
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 5.2e-11 71.2 96 43.8
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 5.2e-11 71.2 103 40.8
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 6.8e-11 70.9 45 82.2
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 6.8e-11 70.9 90 46.7
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 8.8e-11 70.5 118 40.7
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 9.8e-10 67.0 99 41.4
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.7e-09 66.2 95 41.1
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 1.7e-09 66.2 106 37.7
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 2.2e-09 65.9 94 43.6
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.2e-09 65.9 95 42.1
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 7.0e-08 60.8 92 38.0
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.2e-07 60.1 120 34.2
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 4.5e-07 58.2 103 36.9
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 1.3e-06 56.6 42 69.0
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 3.8e-06 55.1 92 38.0


User provided reference genes

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