Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0279221 Lupinus albus HOM05D001219 ORTHO05D001017 1.9e-29 131.7 62 100.0
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 3.7e-09 64.3 47 68.1
Lalb_Chr18g0057661 Lupinus albus HOM05D001219 ORTHO05D001017 8.3e-09 63.2 46 63.0
Glyma.07G026100 Glycine max HOM05D001219 ORTHO05D001017 1.9e-08 62.0 52 53.8
Medtr1g069120 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-08 61.6 53 49.1
Medtr1g069145 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-08 61.6 53 49.1
Lj3g0021238 Lotus japonicus HOM05D001219 ORTHO05D001017 3.2e-08 61.2 47 59.6
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 3.2e-08 61.2 53 56.6
Medtr3g465770 Medicago truncatula HOM05D001219 ORTHO05D001017 4.1e-08 60.8 47 57.4
Lalb_Chr01g0011821 Lupinus albus HOM05D001219 ORTHO05D001017 5.4e-08 60.5 48 60.4
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 7.1e-08 60.1 47 61.7
Medtr1g069090 Medicago truncatula HOM05D001219 ORTHO05D001017 9.2e-08 59.7 46 50.0
Medtr3g074570 Medicago truncatula HOM05D001219 ORTHO05D001017 9.2e-08 59.7 47 57.4
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 1.2e-07 59.3 47 57.4
COL.COLO4_26644 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.6e-07 58.9 47 59.6
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-07 58.9 45 53.3
Cpa.g.sc10.120 Carica papaya HOM05D001219 ORTHO05D001017 2.1e-07 58.5 48 56.2
TPR.G29726 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-07 58.5 48 56.2
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 2.7e-07 58.2 49 55.1
QL05p034226 Quercus lobata HOM05D001219 ORTHO05D001017 2.7e-07 58.2 50 56.0
TPR.G38777 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-07 58.2 47 55.3
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-07 57.8 47 57.4
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-07 57.8 49 53.1
Duzib160G0295 Durio zibethinus HOM05D001219 ORTHO05D001017 4.6e-07 57.4 52 57.7
Glyma.07G026200 Glycine max HOM05D001219 ORTHO05D001017 4.6e-07 57.4 47 57.4
Manes.04G105600 Manihot esculenta HOM05D001219 ORTHO05D001017 4.6e-07 57.4 48 56.2
Medtr1g075040 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-07 57.4 53 47.2
TPR.G15687 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-07 57.4 45 60.0
TWI75G0494 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 4.6e-07 57.4 48 54.2
Duzib235G0909 Durio zibethinus HOM05D001219 ORTHO05D001017 6.0e-07 57.0 50 58.0
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 6.0e-07 57.0 47 59.6
TPR.G15685 Trifolium pratense HOM05D001219 ORTHO05D001017 6.0e-07 57.0 47 57.4
Medtr3g081430 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-07 56.6 47 55.3
Medtr5g067490 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-07 56.6 45 57.8
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-07 56.6 45 57.8
Medtr3g036270 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-06 56.2 45 55.6
TPR.G16304 Trifolium pratense HOM05D001219 ORTHO05D001017 1.0e-06 56.2 47 57.4
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 1.0e-06 56.2 46 58.7
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 1.3e-06 55.8 47 57.4
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 1.3e-06 55.8 48 56.2
Medtr3g081260 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-06 55.8 47 57.4
Medtr6g016910 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-06 55.8 47 51.1
TPR.G22697 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-06 55.8 47 57.4
TWI12G1478 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 1.3e-06 55.8 48 52.1
Medtr3g074550 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-06 55.5 47 55.3
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-06 55.5 46 54.3
Lj3g0011098 Lotus japonicus HOM05D001219 ORTHO05D001017 2.3e-06 55.1 47 53.2
Lj3g0020556 Lotus japonicus HOM05D001219 ORTHO05D001017 2.3e-06 55.1 47 57.4
Psat5g104160 Pisum sativum HOM05D001219 ORTHO05D001017 2.3e-06 55.1 47 51.1
TPR.G17814 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-06 55.1 48 52.1
TPR.G26088 Trifolium pratense HOM05D000474 ORTHO05D003648 2.3e-06 55.1 47 57.4
Medtr4g129140 Medicago truncatula HOM05D001219 ORTHO05D001017 3.0e-06 54.7 51 47.1
CAN.G407.40 Capsicum annuum HOM05D001219 ORTHO05D001017 3.9e-06 54.3 46 54.3
Medtr6g016725 Medicago truncatula HOM05D001219 ORTHO05D001017 3.9e-06 54.3 45 55.6
Medtr6g016905 Medicago truncatula HOM05D001219 ORTHO05D001017 3.9e-06 54.3 45 53.3
Psat7g261560 Pisum sativum HOM05D001219 ORTHO05D001017 3.9e-06 54.3 47 51.1
Psat7g261760 Pisum sativum HOM05D001219 ORTHO05D001017 3.9e-06 54.3 47 51.1
Thecc.06G037400 Theobroma cacao HOM05D001219 ORTHO05D001017 3.9e-06 54.3 47 57.4
TAR636G1678 Trochodendron aralioides HOM05D001219 ORTHO05D001017 3.9e-06 54.3 48 52.1
VMungo0331G0565 Vigna mungo HOM05D001219 ORTHO05D001017 3.9e-06 54.3 46 56.5
Medtr6g054950 Medicago truncatula HOM05D001219 ORTHO05D001017 5.1e-06 53.9 45 51.1
Medtr8g037780 Medicago truncatula HOM05D001219 ORTHO05D001017 5.1e-06 53.9 49 57.1
Psat7g261600 Pisum sativum HOM05D001219 ORTHO05D001017 5.1e-06 53.9 49 51.0
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 5.1e-06 53.9 48 54.2
Prupe.3G095400 Prunus persica HOM05D001219 ORTHO05D001017 5.1e-06 53.9 47 55.3
PGSC0003DMG400014130 Solanum tuberosum HOM05D001219 ORTHO05D001017 5.1e-06 53.9 46 52.2
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 5.1e-06 53.9 47 53.2
arahy.Tifrunner.gnm1.ann1.1BHQ1A Arachis hypogaea HOM05D001219 ORTHO05D001017 6.6e-06 53.5 46 52.2
arahy.Tifrunner.gnm1.ann1.G4PD56 Arachis hypogaea HOM05D001219 ORTHO05D001017 6.6e-06 53.5 46 52.2
arahy.Tifrunner.gnm1.ann1.S9WJEL Arachis hypogaea HOM05D001219 ORTHO05D001017 6.6e-06 53.5 46 52.2
CAN.G407.41 Capsicum annuum HOM05D001219 ORTHO05D001017 6.6e-06 53.5 46 50.0
Ca_28544_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 6.6e-06 53.5 47 53.2
Ca_30910_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 6.6e-06 53.5 47 53.2
Dinv23311 Davidia involucrata HOM05D001219 ORTHO05D001017 6.6e-06 53.5 50 50.0
Medtr5g430490 Medicago truncatula HOM05D001219 ORTHO05D001017 6.6e-06 53.5 48 47.9
Psat7g041280 Pisum sativum HOM05D001219 ORTHO05D001017 6.6e-06 53.5 47 53.2
Psat7g261480 Pisum sativum HOM05D001219 ORTHO05D001017 6.6e-06 53.5 47 53.2
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 6.6e-06 53.5 46 52.2
arahy.Tifrunner.gnm1.ann1.P2NKR4 Arachis hypogaea HOM05D001219 ORTHO05D001017 8.6e-06 53.1 46 56.5
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 8.6e-06 53.1 46 56.5
Psat7g261520 Pisum sativum HOM05D001219 ORTHO05D001017 8.6e-06 53.1 47 53.2
TPR.G37434 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-06 53.1 48 52.1
TPR.G38764 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-06 53.1 49 51.0


User provided reference genes

Program Settings