Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0279161 Lupinus albus HOM05D000670 ORTHO05D000529 1.6e-80 302.8 161 100.0
Glyma.07G027100 Glycine max HOM05D000670 ORTHO05D000529 2.8e-32 142.5 205 45.9
VMungo0331G0909 Vigna mungo HOM05D000670 ORTHO05D000529 1.1e-31 140.6 195 51.8
Glyma.08G215600 Glycine max HOM05D000670 ORTHO05D000529 7.6e-30 134.4 207 44.9
Phvul.010G158600 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 3.0e-26 122.5 159 49.1
VMungo1080G1392 Vigna mungo HOM05D000670 ORTHO05D000529 3.6e-19 99.0 159 41.5
Lalb_Chr24g0395361 Lupinus albus HOM05D000670 ORTHO05D000529 1.4e-18 97.1 191 37.2
Lj3g0013175 Lotus japonicus HOM05D000670 ORTHO05D000529 3.3e-17 92.4 185 37.8
Lalb_Chr14g0373971 Lupinus albus HOM05D000670 ORTHO05D000529 2.0e-14 83.2 190 36.3
Lalb_Chr22g0350721 Lupinus albus HOM05D000670 ORTHO05D000529 2.0e-14 83.2 106 52.8
arahy.Tifrunner.gnm1.ann1.P38CZV Arachis hypogaea HOM05D000670 ORTHO05D000529 4.5e-14 82.0 212 36.8
Glyma.07G027200 Glycine max HOM05D000670 ORTHO05D000529 7.7e-14 81.3 158 37.3
Phvul.010G158500 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 5.0e-13 78.6 155 37.4
TPR.G38701 Trifolium pratense HOM05D000670 ORTHO05D000529 5.0e-13 78.6 106 44.3
Glyma.13G368700 Glycine max HOM05D000670 ORTHO05D000529 6.5e-13 78.2 143 37.8
VMungo0331G1794 Vigna mungo HOM05D000670 ORTHO05D000529 1.4e-12 77.0 163 38.0
Medtr2g104550 Medicago truncatula HOM05D000670 ORTHO05D000529 1.9e-12 76.6 156 36.5
Glyma.08G215500 Glycine max HOM05D000670 ORTHO05D000529 2.5e-12 76.3 137 35.0
Phvul.010G158400 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 2.5e-12 76.3 160 37.5
Medtr2g104490 Medicago truncatula HOM05D000670 ORTHO05D000529 7.2e-12 74.7 159 37.1
Ca_26517_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 1.6e-11 73.6 127 40.2
Glyma.07G116700 Glycine max HOM05D000670 ORTHO05D000529 2.7e-11 72.8 145 40.0
Glyma.03G105000 Glycine max HOM05D000670 ORTHO05D000529 3.6e-11 72.4 150 38.7
Lalb_Chr14g0373961 Lupinus albus HOM05D000670 ORTHO05D000529 4.7e-11 72.0 132 37.9
Phvul.005G181300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 4.7e-11 72.0 166 34.9
Medtr4g009110 Medicago truncatula HOM05D000670 ORTHO05D000529 8.0e-11 71.2 103 44.7
arahy.Tifrunner.gnm1.ann1.IGZ079 Arachis hypogaea HOM05D000670 ORTHO05D000529 1.0e-10 70.9 40 87.5
Lj3g0006710 Lotus japonicus HOM05D000670 ORTHO05D000529 1.0e-10 70.9 162 33.3
arahy.Tifrunner.gnm1.ann1.V2ZUG7 Arachis hypogaea HOM05D000670 ORTHO05D038901 1.4e-10 70.5 116 45.7
Medtr8g009010 Medicago truncatula HOM05D000670 ORTHO05D000529 1.4e-10 70.5 160 34.4
Lalb_Chr25g0279151 Lupinus albus HOM05D000670 ORTHO05D000529 1.8e-10 70.1 182 31.9
Psat7g258400 Pisum sativum HOM05D000670 ORTHO05D000529 1.8e-10 70.1 99 43.4
Ca_08027_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 2.3e-10 69.7 162 35.2
Medtr8g009020 Medicago truncatula HOM05D000670 ORTHO05D000529 2.3e-10 69.7 154 35.1
Medtr4g009540 Medicago truncatula HOM05D000670 ORTHO05D000529 3.9e-10 68.9 102 43.1
arahy.Tifrunner.gnm1.ann1.1NL7KX Arachis hypogaea HOM05D000670 ORTHO05D038901 5.2e-10 68.6 119 44.5
Lj1g0022554 Lotus japonicus HOM05D000670 ORTHO05D000529 5.2e-10 68.6 145 37.2
VMungo1080G0413 Vigna mungo HOM05D000670 ORTHO05D000529 5.2e-10 68.6 181 33.1
Glyma.13G368500 Glycine max HOM05D000670 ORTHO05D000529 2.0e-09 66.6 157 35.7
Psat0s4073g0040 Pisum sativum HOM05D000670 ORTHO05D000529 7.4e-09 64.7 97 44.3
Phvul.005G181400 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 9.7e-09 64.3 47 63.8
Phvul.010G042700 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 9.7e-09 64.3 66 54.5
VMungo0331G1110 Vigna mungo HOM05D000670 ORTHO05D000529 9.7e-09 64.3 45 73.3
Lj3g0020213 Lotus japonicus HOM05D000670 ORTHO05D000529 1.7e-08 63.5 44 68.2
TPR.G28211 Trifolium pratense HOM05D000670 ORTHO05D000529 1.7e-08 63.5 134 38.1
Hma1.2p1_0723F.1_g208810 Hydrangea macrophylla HOM05D000670 ORTHO05D000529 2.8e-08 62.8 133 35.3
Duzib147G1159 Durio zibethinus HOM05D000670 ORTHO05D000529 6.3e-08 61.6 117 40.2
Psat4g221920 Pisum sativum HOM05D000670 ORTHO05D000529 6.3e-08 61.6 100 39.0
Medtr7g080780 Medicago truncatula HOM05D000670 ORTHO05D000529 8.2e-08 61.2 118 38.1
Oeu059809.2 Olea europaea HOM05D000670 ORTHO05D000529 8.2e-08 61.2 118 33.9
Medtr2g104590 Medicago truncatula HOM05D000670 ORTHO05D000529 1.1e-07 60.8 40 75.0
Ciclev10027504m.g Citrus clementina HOM05D000670 ORTHO05D000529 1.4e-07 60.5 106 39.6
Glyma.09G246951 Glycine max HOM05D000670 ORTHO05D000529 1.8e-07 60.1 168 31.0
Thecc.01G081400 Theobroma cacao HOM05D000670 ORTHO05D000529 2.4e-07 59.7 118 37.3
Ca_01030_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 3.1e-07 59.3 36 80.6
Cc02_g34100 Coffea canephora HOM05D000670 ORTHO05D000529 3.1e-07 59.3 114 31.6
Duzib264G0241 Durio zibethinus HOM05D000670 ORTHO05D000529 3.1e-07 59.3 117 37.6
Dinv26987 Davidia involucrata HOM05D000670 ORTHO05D000529 4.1e-07 58.9 121 35.5
Phvul.010G158300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 4.1e-07 58.9 52 55.8
VMungo0331G0488 Vigna mungo HOM05D000670 ORTHO05D000529 4.1e-07 58.9 56 57.1
Aqoxy439s001 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 5.3e-07 58.5 158 28.5
Aqoxy6G00605 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 5.3e-07 58.5 158 28.5
Cc00_g24080 Coffea canephora HOM05D000670 ORTHO05D000529 5.3e-07 58.5 118 33.1
Glyma.07G027300 Glycine max HOM05D000670 ORTHO05D000529 7.0e-07 58.2 41 65.9
Glyma.15G005000 Glycine max HOM05D000670 ORTHO05D000529 7.0e-07 58.2 140 35.0
TPR.G32141 Trifolium pratense HOM05D000100 ORTHO05D000052 7.0e-07 58.2 159 32.1
arahy.Tifrunner.gnm1.ann1.5IZP5X Arachis hypogaea HOM05D000670 ORTHO05D000529 9.1e-07 57.8 34 82.4
arahy.Tifrunner.gnm1.ann1.ZD5CML Arachis hypogaea HOM05D000670 ORTHO05D000529 9.1e-07 57.8 34 82.4
Glyma.15G005100 Glycine max HOM05D000670 ORTHO05D000529 9.1e-07 57.8 158 32.3
MSTRG.3497 Avicennia marina HOM05D000670 ORTHO05D000529 1.2e-06 57.4 78 46.2
Glyma.05G110700 Glycine max HOM05D000670 ORTHO05D000529 1.2e-06 57.4 114 36.8
Phvul.003G231100 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 1.2e-06 57.4 107 39.3
arahy.Tifrunner.gnm1.ann1.2V7Q2K Arachis hypogaea HOM05D000670 ORTHO05D000529 1.6e-06 57.0 155 31.0
arahy.Tifrunner.gnm1.ann1.ZR3UX0 Arachis hypogaea HOM05D000670 ORTHO05D000529 1.6e-06 57.0 155 31.0
MSTRG.23634 Avicennia marina HOM05D000670 ORTHO05D000529 1.6e-06 57.0 41 65.9
Cc02_g34020 Coffea canephora HOM05D000670 ORTHO05D000529 2.0e-06 56.6 79 40.5
Glyma.18G246000 Glycine max HOM05D000670 ORTHO05D000529 2.0e-06 56.6 122 41.0
Oeu059807.2 Olea europaea HOM05D000670 ORTHO05D000529 2.0e-06 56.6 53 52.8
VMungo0251G3790 Vigna mungo HOM05D000670 ORTHO05D000529 2.0e-06 56.6 103 35.9
VMungo1321G0001 Vigna mungo HOM05D000670 ORTHO05D000529 2.0e-06 56.6 108 38.0
A04p17240 Brassica napus HOM05D000670 ORTHO05D000529 2.6e-06 56.2 58 51.7
Lj2g0002533 Lotus japonicus HOM05D000670 ORTHO05D000529 2.6e-06 56.2 60 51.7
TAR381G1681 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.6e-06 56.2 64 51.6
TAR625G0050 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.6e-06 56.2 51 58.8
arahy.Tifrunner.gnm1.ann1.5QXC4B Arachis hypogaea HOM05D000670 ORTHO05D000529 3.5e-06 55.8 161 32.3
arahy.Tifrunner.gnm1.ann1.X3LKGW Arachis hypogaea HOM05D000670 ORTHO05D000529 3.5e-06 55.8 161 32.3
Carub.0007s0237 Capsella rubella HOM05D000670 ORTHO05D000529 3.5e-06 55.8 60 50.0
Duzib187G1813 Durio zibethinus HOM05D000670 ORTHO05D000529 3.5e-06 55.8 117 35.9
Lj4A173G11 Lonicera japonica HOM05D000670 ORTHO05D000529 3.5e-06 55.8 43 58.1
Lj3g0024272 Lotus japonicus HOM05D000670 ORTHO05D000529 3.5e-06 55.8 40 75.0
Oeu045651.2 Olea europaea HOM05D000670 ORTHO05D000529 3.5e-06 55.8 56 46.4
Psat3g104640 Pisum sativum HOM05D000670 ORTHO05D000529 3.5e-06 55.8 174 32.2
arahy.Tifrunner.gnm1.ann1.4TH67S Arachis hypogaea HOM05D000670 ORTHO05D000529 4.5e-06 55.5 39 64.1
arahy.Tifrunner.gnm1.ann1.FH0TD2 Arachis hypogaea HOM05D000670 ORTHO05D000529 4.5e-06 55.5 39 64.1
BcaB03g12329 Brassica carinata HOM05D000670 ORTHO05D000529 4.5e-06 55.5 37 67.6
Oeu061820.1 Olea europaea HOM05D000670 ORTHO05D000529 4.5e-06 55.5 117 31.6
Phvul.008G050850 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 4.5e-06 55.5 115 36.5
Psat4g222040 Pisum sativum HOM05D000670 ORTHO05D000529 4.5e-06 55.5 61 49.2
vmacro22434 Vaccinium macrocarpon HOM05D000670 ORTHO05D000529 4.5e-06 55.5 38 65.8
vmacro23433 Vaccinium macrocarpon HOM05D000670 ORTHO05D000529 4.5e-06 55.5 38 65.8
BcaB06g27825 Brassica carinata HOM05D000670 ORTHO05D000529 5.9e-06 55.1 58 51.7
BraA04t17352Z Brassica rapa HOM05D000670 ORTHO05D000529 5.9e-06 55.1 58 51.7
CARHR114030 Cardamine hirsuta HOM05D000670 ORTHO05D000529 5.9e-06 55.1 37 70.3
Glyma.08G215400 Glycine max HOM05D000670 ORTHO05D000529 5.9e-06 55.1 41 58.5
Lj4A172T20 Lonicera japonica HOM05D000670 ORTHO05D000529 5.9e-06 55.1 121 32.2
SGA_v2.0_scaffold174G39230 Striga asiatica HOM05D000670 ORTHO05D000529 5.9e-06 55.1 60 53.3
ATR0767G060 Amborella trichopoda HOM05D000670 ORTHO05D000529 7.7e-06 54.7 156 30.1
A08p22900 Brassica napus HOM05D000670 ORTHO05D000529 7.7e-06 54.7 37 67.6
BraA08t34252Z Brassica rapa HOM05D000670 ORTHO05D000529 7.7e-06 54.7 37 67.6
CARHR246240 Cardamine hirsuta HOM05D000670 ORTHO05D000529 7.7e-06 54.7 37 67.6
Thhalv10025715m.g Eutrema salsugineum HOM05D000670 ORTHO05D000529 7.7e-06 54.7 37 67.6
Glyma.07G117500 Glycine max HOM05D000670 ORTHO05D000529 7.7e-06 54.7 106 40.6
unitig_748.g8744 Utricularia gibba HOM05D000670 ORTHO05D000529 7.7e-06 54.7 76 38.2


User provided reference genes

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