Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 2.2e-143 512.3 264 100.0
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 5.1e-116 421.4 264 81.8
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 6.9e-113 411.0 264 80.3
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 4.5e-112 408.3 263 79.8
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 2.1e-109 399.4 264 79.5
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 3.6e-109 398.7 265 79.6
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 4.7e-109 398.3 264 78.4
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 7.9e-109 397.5 264 78.8
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 6.7e-108 394.4 264 78.4
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 2.0e-107 392.9 264 78.0
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 2.6e-104 382.5 263 76.4
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 1.4e-89 333.6 262 66.0
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 9.1e-89 330.9 263 65.4
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 9.1e-89 330.9 254 66.1
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 2.7e-88 329.3 253 68.0
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.7e-88 329.3 254 68.9
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 1.0e-87 327.4 262 66.0
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.5e-87 324.7 254 67.3
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 1.1e-86 323.9 253 66.4
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 9.4e-86 320.9 252 67.5
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 9.4e-86 320.9 253 65.2
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 8.0e-85 317.8 242 68.2
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 1.0e-84 317.4 255 66.7
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 7.5e-83 311.2 258 64.3
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 7.0e-81 304.7 253 63.2
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 1.2e-80 303.9 249 65.9
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 2.0e-80 303.1 252 63.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.7e-80 302.8 265 63.0
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 4.5e-80 302.0 254 66.1
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.7e-79 300.1 254 63.4
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 3.8e-79 298.9 249 63.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 5.0e-79 298.5 249 65.1
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 8.6e-79 297.7 256 62.5
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 8.6e-79 297.7 251 61.8
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 8.6e-79 297.7 243 66.7
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.5e-78 297.0 252 63.1
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.9e-78 296.6 262 60.3
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 5.6e-78 295.0 250 62.0
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 9.5e-78 294.3 257 60.3
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.6e-77 293.5 231 68.4
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 3.6e-77 292.4 253 62.8
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 8.0e-77 291.2 218 68.3
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 8.0e-77 291.2 293 56.7
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.3e-76 289.7 254 63.8
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 8.9e-76 287.7 249 61.8
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.5e-75 287.0 252 60.7
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 2.0e-75 286.6 262 57.6
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 2.0e-75 286.6 233 65.2
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.0e-75 286.6 249 60.2
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 4.9e-74 282.0 254 59.4
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 6.4e-74 281.6 263 56.7
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.4e-74 281.6 252 61.1
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.1e-73 280.8 262 56.1
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 2.4e-73 279.6 263 56.3
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 2.4e-73 279.6 268 57.1
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.4e-73 279.6 261 57.1
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.1e-73 278.9 252 60.7
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.2e-72 277.3 252 60.7
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.7e-72 276.2 254 57.1
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.7e-72 276.2 249 60.6
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 3.5e-72 275.8 251 56.2
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.0e-71 274.2 261 56.3
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 1.3e-71 273.9 233 65.7
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 3.9e-71 272.3 262 58.0
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 5.0e-71 271.9 241 60.6
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 1.5e-70 270.4 241 59.3
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.5e-70 269.6 252 56.0
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 2.5e-70 269.6 241 58.5
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 6.2e-69 265.0 252 56.7
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.4e-68 263.8 252 59.1
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.3e-68 263.1 252 55.2
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.2e-67 260.8 252 55.2
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.2e-67 260.8 261 52.9
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 2.0e-67 260.0 207 66.2
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 4.4e-67 258.8 250 54.4
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 4.4e-67 258.8 264 51.1
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 4.4e-67 258.8 264 51.1
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 4.4e-67 258.8 264 51.5
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 7.5e-67 258.1 252 53.2
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 7.5e-67 258.1 246 54.1
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.7e-66 256.9 231 61.0
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 4.9e-66 255.4 246 54.5
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.4e-65 253.8 242 55.8
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 3.2e-65 252.7 246 54.5
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 3.2e-65 252.7 246 54.5
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 5.0e-63 245.4 246 54.1
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 2.5e-62 243.0 271 48.3
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 1.6e-61 240.4 251 53.8
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.6e-61 239.2 259 53.3
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 3.1e-60 236.1 250 52.8
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.6e-59 233.0 332 44.3
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 4.4e-59 232.3 188 61.7
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 9.8e-59 231.1 255 49.8
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-58 230.3 246 51.6
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 2.2e-58 229.9 222 52.7
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 2.4e-57 226.5 208 58.2
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 2.2e-50 203.4 225 52.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 4.1e-49 199.1 169 56.8
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 2.1e-48 196.8 167 63.5
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 2.1e-45 186.8 247 47.0
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 2.4e-44 183.3 149 60.4
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 8.4e-42 174.9 137 65.7
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 2.0e-35 153.7 110 70.9
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 2.1e-32 143.7 246 41.1
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 5.1e-31 139.0 163 49.1
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.9e-27 124.8 113 57.5
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.9e-27 124.8 113 57.5
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 9.3e-25 118.2 206 38.8
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 2.7e-24 116.7 89 60.7
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.5e-22 110.2 129 50.4
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 2.8e-21 106.7 198 30.8
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 4.6e-16 89.4 155 37.4
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.7e-15 85.1 81 59.3
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.5e-14 83.6 71 63.4
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.1e-12 78.2 98 48.0
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 1.3e-10 71.2 222 26.1
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 1.1e-09 68.2 122 33.6


User provided reference genes

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