Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 5.1e-160 567.8 302 100.0
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 4.5e-100 368.6 303 71.3
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 1.8e-72 276.9 263 63.1
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 6.4e-70 268.5 228 64.0
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 1.6e-68 263.8 240 64.2
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 1.3e-67 260.8 259 59.8
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 3.9e-67 259.2 268 58.6
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 7.3e-66 255.0 244 60.2
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 2.1e-65 253.4 255 56.9
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 4.4e-63 245.7 265 58.5
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 9.8e-63 244.6 258 58.1
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 2.2e-62 243.4 260 59.2
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 4.9e-62 242.3 263 58.6
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 9.6e-50 201.4 230 53.5
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 2.1e-49 200.3 211 57.8
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 1.7e-46 190.7 269 48.3
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.1e-37 161.4 277 36.1
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 5.4e-37 159.1 215 45.1
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 5.4e-37 159.1 277 36.1
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 6.0e-36 155.6 282 34.0
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 3.0e-35 153.3 257 38.5
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 5.1e-35 152.5 188 44.1
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 6.6e-35 152.1 271 37.3
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 8.7e-35 151.8 263 36.9
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 8.7e-35 151.8 253 44.3
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 2.5e-34 150.2 226 43.4
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 5.6e-34 149.1 260 40.8
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 5.6e-34 149.1 261 38.7
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 7.4e-34 148.7 190 47.9
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 1.1e-32 144.8 193 41.5
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 2.4e-32 143.7 197 43.7
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 3.1e-32 143.3 199 46.2
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 9.0e-32 141.7 282 37.2
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 7.6e-31 138.7 270 40.7
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 4.9e-30 136.0 214 41.1
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 6.4e-30 135.6 253 36.4
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 4.2e-29 132.9 178 41.0
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 4.2e-29 132.9 205 41.0
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 2.1e-28 130.6 199 38.2
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 3.5e-28 129.8 105 52.4
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 4.6e-28 129.4 260 33.5
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 7.9e-28 128.6 232 40.9
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 7.9e-28 128.6 202 41.1
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.0e-27 128.3 241 41.1
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 1.0e-27 128.3 237 35.9
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 1.8e-27 127.5 255 34.9
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 1.8e-27 127.5 280 35.4
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 2.3e-27 127.1 209 40.2
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 3.0e-27 126.7 248 35.5
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 3.0e-27 126.7 246 39.4
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.5e-26 123.6 236 35.2
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 3.3e-26 123.2 195 47.7
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 3.3e-26 123.2 185 38.4
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 7.4e-26 122.1 253 36.4
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 9.6e-26 121.7 205 37.6
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 2.1e-25 120.6 247 35.2
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 2.8e-25 120.2 188 39.9
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 3.7e-25 119.8 205 37.1
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 6.2e-25 119.0 188 39.4
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 6.2e-25 119.0 96 52.1
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 6.2e-25 119.0 207 34.8
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.1e-24 118.2 231 35.1
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.4e-24 117.9 225 41.3
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.4e-24 117.9 223 35.9
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 1.8e-24 117.5 246 35.4
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 5.3e-24 115.9 218 34.9
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 5.3e-24 115.9 192 39.6
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 5.3e-24 115.9 209 38.8
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 5.3e-24 115.9 248 34.3
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 9.0e-24 115.2 209 40.2
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 2.6e-23 113.6 168 43.5
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 7.6e-23 112.1 161 40.4
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 7.6e-23 112.1 204 38.7
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 7.6e-23 112.1 204 38.2
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 1.0e-22 111.7 223 41.7
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 1.3e-22 111.3 161 44.7
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 1.3e-22 111.3 171 39.2
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 1.7e-22 110.9 215 35.8
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 2.2e-22 110.5 192 40.1
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 2.2e-22 110.5 208 37.0
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 4.9e-22 109.4 224 34.8
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 1.4e-21 107.8 212 34.9
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 1.4e-21 107.8 208 38.0
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 7.1e-21 105.5 193 40.4
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 9.3e-21 105.1 215 36.3
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.2e-20 104.8 218 36.2
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 1.6e-20 104.4 148 37.8
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 2.1e-20 104.0 225 35.1
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 2.1e-20 104.0 251 36.3
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 2.1e-20 104.0 207 35.3
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.7e-20 103.6 109 44.0
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 3.5e-20 103.2 224 36.6
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 3.5e-20 103.2 219 35.2
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 1.3e-19 101.3 211 34.1
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 1.8e-19 100.9 189 40.7
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 1.8e-19 100.9 213 32.4
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 3.0e-19 100.1 227 36.6
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 6.7e-19 99.0 90 46.7
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 2.5e-18 97.1 287 34.1
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 5.7e-18 95.9 243 30.9
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 7.4e-18 95.5 220 33.2
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 8.2e-17 92.0 175 33.1
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 1.1e-16 91.7 193 30.6
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.1e-16 91.7 206 33.0
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 1.1e-16 91.7 210 31.0
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 1.4e-16 91.3 211 37.4
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 2.4e-16 90.5 206 32.5
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 3.1e-16 90.1 83 45.8
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 4.1e-16 89.7 147 37.4
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 9.0e-16 88.6 227 29.1
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 9.0e-16 88.6 75 48.0
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 2.6e-15 87.0 77 57.1
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 4.5e-15 86.3 202 30.7
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 1.7e-14 84.3 149 32.2
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.1e-13 81.6 208 34.6
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.9e-13 80.9 145 33.1
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 4.2e-13 79.7 104 43.3
Psat0s911g0040 Pisum sativum HOM05D006067 ORTHO05D007327 7.2e-13 79.0 159 45.9
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 3.0e-11 73.6 71 47.9
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 8.7e-11 72.0 191 29.8
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 8.7e-11 72.0 93 36.6
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.2e-09 67.4 99 38.4
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 2.2e-09 67.4 154 29.9
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 2.8e-09 67.0 47 55.3
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.3e-06 58.2 49 42.9


User provided reference genes

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