Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.0e-181 639.0 329 100.0
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 6.5e-84 315.1 339 58.4
Lalb_Chr22g0354321 Lupinus albus HOM05D007760 ORTHO05D008337 1.4e-67 260.8 362 50.6
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 1.0e-41 174.9 325 40.0
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 1.0e-41 174.9 325 40.0
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.2e-39 167.2 315 41.3
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.8e-25 120.9 332 35.8
TPR.G434 Trifolium pratense HOM05D007760 ORTHO05D008337 5.2e-25 119.4 214 43.9
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 8.9e-25 118.6 307 34.2
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.2e-24 118.2 305 35.7
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 9.8e-24 115.2 311 34.1
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.7e-23 114.4 309 37.2
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 2.2e-23 114.0 306 36.3
Ca_13429_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 1.1e-22 111.7 311 34.1
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 1.2e-18 98.2 225 37.3
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 2.8e-18 97.1 302 34.8
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 3.6e-18 96.7 307 32.9
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 6.2e-18 95.9 305 34.1
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 1.5e-16 91.3 311 31.2
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 1.5e-16 91.3 170 39.4
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 7.5e-16 89.0 321 31.2
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 9.8e-16 88.6 358 29.6
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 2.2e-15 87.4 322 30.4
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 6.4e-15 85.9 303 29.0
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 8.3e-15 85.5 312 31.4
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 5.4e-14 82.8 317 30.6
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 9.2e-14 82.0 311 32.5
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 9.2e-14 82.0 325 30.8
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 3.9e-12 76.6 314 31.8
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 5.1e-12 76.3 318 30.8
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 5.1e-12 76.3 322 30.4
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 8.6e-12 75.5 318 29.9
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 4.3e-11 73.2 322 28.6
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.3e-11 73.2 316 28.8
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 5.6e-11 72.8 337 29.1
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 5.6e-11 72.8 315 27.6
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 7.3e-11 72.4 314 30.3
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 9.5e-11 72.0 329 30.1
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.1e-10 70.9 339 28.6
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 8.1e-10 68.9 341 28.2
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.3e-09 67.4 333 27.6
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 2.3e-09 67.4 191 33.5
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 5.2e-09 66.2 315 27.9
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 5.2e-09 66.2 330 29.4
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 6.8e-09 65.9 313 28.8
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.2e-08 65.1 227 30.4
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 4.4e-08 63.2 308 30.2
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 4.4e-08 63.2 341 28.7
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 4.4e-08 63.2 338 28.1
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 7.5e-08 62.4 310 29.4
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 7.5e-08 62.4 155 32.9
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 9.9e-08 62.0 155 32.3
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.3e-07 61.6 169 32.5
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 1.7e-07 61.2 233 29.6
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.7e-07 61.2 240 28.3
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 2.9e-07 60.5 316 29.4
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.9e-07 60.5 321 25.2
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 6.4e-07 59.3 355 26.5
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 8.3e-07 58.9 314 29.0
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 8.3e-07 58.9 318 26.7
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 8.3e-07 58.9 305 29.5
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.1e-06 58.5 299 30.1
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 3.2e-06 57.0 306 27.8
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 3.2e-06 57.0 135 36.3
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 5.4e-06 56.2 178 30.3
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 7.1e-06 55.8 77 50.6
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 9.2e-06 55.5 221 30.3
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 9.2e-06 55.5 140 32.9


User provided reference genes

Program Settings