Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 1.8e-122 442.6 226 100.0
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 4.7e-94 348.2 198 85.9
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 6.2e-94 347.8 198 85.9
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 2.9e-91 339.0 198 84.3
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 6.0e-89 331.3 234 71.4
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 3.9e-88 328.6 234 70.9
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 6.6e-88 327.8 198 81.3
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.1e-85 320.5 213 73.7
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.1e-85 320.5 198 79.3
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 1.4e-85 320.1 225 72.0
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 2.4e-85 319.3 225 72.0
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 2.4e-85 319.3 226 73.0
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.1e-85 318.9 198 78.3
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 3.1e-85 318.9 198 78.8
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 4.0e-85 318.5 198 78.8
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 6.8e-85 317.8 223 71.7
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.6e-84 315.8 202 73.8
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 2.6e-84 315.8 198 77.3
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 9.9e-84 313.9 229 69.9
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.2e-83 312.8 198 74.7
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 2.9e-83 312.4 204 72.5
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 3.8e-83 312.0 225 70.7
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 4.9e-83 311.6 198 75.3
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 6.4e-83 311.2 225 72.9
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 8.4e-83 310.8 233 67.0
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.4e-82 310.1 225 71.1
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 2.4e-82 309.3 225 67.1
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 3.2e-82 308.9 198 75.8
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 4.2e-82 308.5 225 68.9
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 4.2e-82 308.5 223 70.4
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 5.4e-82 308.1 223 67.7
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 5.4e-82 308.1 225 68.9
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 7.1e-82 307.8 225 68.0
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 9.3e-82 307.4 200 74.0
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.6e-81 306.6 198 71.7
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 2.1e-81 306.2 198 76.8
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 4.6e-81 305.1 198 76.3
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 4.6e-81 305.1 198 73.7
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 6.0e-81 304.7 198 75.8
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 1.0e-80 303.9 198 73.7
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.0e-80 303.9 212 70.8
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 2.3e-80 302.8 224 66.5
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 5.1e-80 301.6 200 73.0
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 5.1e-80 301.6 242 64.9
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 6.6e-80 301.2 198 73.7
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 1.9e-79 299.7 210 69.0
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 3.3e-79 298.9 189 75.7
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 9.6e-79 297.4 198 70.7
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.3e-78 297.0 242 64.0
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 1.3e-78 297.0 198 71.7
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 1.6e-78 296.6 198 71.2
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 2.1e-78 296.2 197 74.1
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 8.1e-78 294.3 199 70.4
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 8.1e-78 294.3 198 68.7
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.1e-77 293.9 198 67.2
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.4e-77 293.5 198 71.7
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.8e-77 293.1 213 67.1
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.8e-77 293.1 198 72.2
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.4e-77 292.7 198 69.2
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 3.1e-77 292.4 198 70.2
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.0e-77 292.0 183 78.1
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 6.9e-77 291.2 198 70.2
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 9.0e-77 290.8 215 66.5
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 9.0e-77 290.8 196 68.9
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.2e-76 290.4 198 68.7
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 3.4e-76 288.9 198 66.2
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 4.4e-76 288.5 226 64.2
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 7.6e-76 287.7 198 68.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.3e-75 287.0 198 72.2
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 1.3e-75 287.0 198 67.7
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 2.2e-75 286.2 198 68.2
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 2.2e-75 286.2 198 70.2
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 2.9e-75 285.8 225 63.6
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 4.9e-75 285.0 198 69.2
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 8.4e-75 284.3 197 69.0
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 1.4e-74 283.5 209 64.6
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.4e-74 283.5 213 64.3
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.9e-74 283.1 196 70.9
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 2.4e-74 282.7 197 72.1
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 6.0e-73 278.1 184 71.7
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 6.0e-73 278.1 198 66.7
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 6.0e-73 278.1 198 66.7
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 7.9e-73 277.7 186 72.6
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 1.0e-72 277.3 190 69.5
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.0e-72 277.3 223 60.5
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.3e-72 276.9 198 67.2
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.3e-72 276.9 199 68.8
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.7e-72 276.6 196 68.4
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 2.3e-72 276.2 186 71.5
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.3e-72 276.2 199 65.3
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.0e-72 275.8 226 61.5
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 3.9e-72 275.4 198 67.7
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.9e-72 275.4 184 71.2
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.9e-72 275.4 184 71.2
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 8.7e-72 274.2 183 69.9
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 1.1e-71 273.9 198 66.2
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 1.1e-71 273.9 198 66.2
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.9e-71 273.1 198 67.2
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.9e-71 273.1 198 69.2
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 2.5e-71 272.7 183 69.9
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 3.3e-71 272.3 198 67.2
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.3e-70 270.4 198 67.2
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 1.3e-70 270.4 199 67.3
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 1.6e-70 270.0 198 65.2
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.6e-70 270.0 198 63.1
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 4.8e-70 268.5 198 66.2
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.1e-69 267.3 186 71.0
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.8e-69 266.5 197 64.0
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 7.6e-68 261.2 200 61.0
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 9.9e-68 260.8 200 61.5
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 1.3e-67 260.4 198 63.1
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.9e-67 259.2 192 66.7
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 4.2e-66 255.4 191 64.9
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 6.0e-65 251.5 178 68.5
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.8e-64 250.0 198 62.6
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 7.4e-63 244.6 180 66.1
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 1.1e-61 240.7 187 62.0
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 4.5e-60 235.3 183 62.8
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 1.0e-59 234.2 196 59.7
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 8.4e-59 231.1 170 68.2
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 7.9e-57 224.6 224 51.8
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.3e-56 223.8 169 63.9
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 3.3e-55 219.2 144 71.5
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 8.2e-54 214.5 144 66.0
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 8.2e-54 214.5 158 66.5
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.1e-53 214.2 142 71.1
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 1.0e-51 207.6 194 52.1
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 1.3e-51 207.2 156 60.9
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 5.0e-51 205.3 187 54.0
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 6.5e-51 204.9 144 63.9
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 1.9e-50 203.4 198 50.0
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 1.6e-46 190.3 198 55.1
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 6.3e-46 188.3 114 72.8
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 3.4e-44 182.6 199 49.2
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 1.6e-41 173.7 98 79.6
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 3.0e-40 169.5 126 65.9
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 1.4e-34 150.6 189 42.3
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 7.9e-33 144.8 180 45.0
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 7.9e-33 144.8 183 44.8
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 1.8e-24 117.1 185 35.1
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.3e-22 110.9 68 76.5
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 8.2e-22 108.2 74 62.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.2e-20 104.4 194 38.1
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 2.0e-20 103.6 118 46.6
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.1e-18 97.8 129 43.4
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 5.5e-18 95.5 128 43.0
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 5.5e-18 95.5 71 56.3
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 8.8e-16 88.2 58 72.4
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.0e-15 87.0 103 48.5
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 8.5e-11 71.6 73 53.4
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 1.6e-09 67.4 50 70.0
Dinv05788 Davidia involucrata HOM05D004717 ORTHO05D005636 1.8e-08 63.9 63 60.3
Cre03.g145427 Chlamydomonas reinhardtii HOM05D037009 ORTHO05D034383 2.2e-06 57.0 134 27.6
Nn2g15094 Nelumbo nucifera HOM05D004717 ORTHO05D005636 2.2e-06 57.0 44 63.6


User provided reference genes

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