Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.2e-175 619.8 317 100.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 5.5e-157 557.8 320 88.1
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 8.0e-156 553.9 317 87.4
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.8e-155 552.7 317 87.1
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 8.5e-150 533.9 315 86.3
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 2.5e-149 532.3 317 83.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.7e-148 528.1 315 84.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.0e-147 525.4 315 84.4
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 4.1e-144 515.0 303 83.8
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 5.9e-143 511.1 318 79.9
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.8e-142 508.4 317 82.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.5e-141 506.5 360 73.3
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 3.2e-141 505.4 317 79.2
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 4.2e-141 505.0 318 78.9
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.7e-140 501.5 315 78.1
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 8.0e-140 500.7 315 77.5
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.0e-139 500.4 315 78.1
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.8e-139 499.6 316 77.8
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 4.0e-139 498.4 318 77.7
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 9.8e-138 493.8 314 77.1
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.7e-137 493.0 314 77.1
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 4.9e-137 491.5 317 76.0
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 8.3e-137 490.7 316 75.6
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.0e-136 487.6 318 75.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 9.2e-136 487.3 318 75.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.0e-134 483.8 318 75.2
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.0e-134 483.8 318 75.8
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.3e-134 483.4 324 74.4
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.7e-134 483.0 318 73.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 3.8e-134 481.9 317 72.9
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 8.6e-134 480.7 320 74.4
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-133 479.2 318 73.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.3e-133 478.8 317 72.9
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 4.7e-132 474.9 319 73.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.0e-131 472.2 318 73.0
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 8.9e-131 470.7 317 73.2
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-130 470.3 317 77.0
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.0e-130 469.5 314 72.3
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 8.3e-129 464.2 316 71.2
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.1e-128 463.8 317 72.2
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.1e-128 463.8 316 71.2
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.4e-128 463.4 316 70.6
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 2.4e-128 462.6 316 70.6
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.4e-128 462.6 316 70.6
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.2e-128 460.7 317 70.7
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.7e-127 459.1 316 70.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.7e-127 459.1 316 70.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 3.5e-127 458.8 316 70.6
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.8e-127 457.6 306 72.5
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-126 457.2 316 69.9
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.7e-126 456.4 318 70.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 3.9e-126 455.3 303 73.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 5.0e-126 454.9 316 71.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.0e-126 454.9 318 70.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 5.0e-126 454.9 316 70.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.6e-126 454.1 306 71.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-125 453.8 338 71.9
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 5.6e-125 451.4 322 68.6
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.2e-124 450.3 317 70.3
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.2e-124 450.3 318 69.2
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.2e-124 450.3 318 69.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.6e-124 449.9 311 72.0
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-124 449.1 307 71.7
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 8.0e-124 447.6 317 70.3
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 4.0e-123 445.3 325 67.7
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 6.8e-123 444.5 303 71.9
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.6e-122 442.6 318 71.7
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.3e-121 440.3 338 66.0
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 3.2e-120 435.6 309 68.6
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 6.0e-119 431.4 313 67.7
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 7.8e-119 431.0 318 66.7
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.7e-118 429.9 304 68.1
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 5.0e-118 428.3 297 70.7
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.1e-117 427.2 318 68.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 6.2e-116 421.4 317 65.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 8.1e-116 421.0 320 68.4
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.3e-115 419.5 298 72.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 8.9e-115 417.5 269 78.1
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.2e-114 417.2 316 64.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.4e-113 411.4 306 67.6
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.4e-112 409.5 269 79.6
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.4e-112 409.5 269 79.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.7e-111 406.0 317 65.9
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.4e-106 389.0 289 68.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 7.8e-103 377.9 314 62.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 8.1e-100 367.9 315 60.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 4.0e-99 365.5 254 70.5
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 8.7e-94 347.8 233 73.4
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 7.3e-93 344.7 248 69.0
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 3.8e-89 332.4 323 51.4
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 3.2e-88 329.3 181 92.3
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.7e-87 326.2 315 49.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.0e-86 324.3 319 54.2
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 5.1e-86 322.0 256 66.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.5e-82 308.9 314 47.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.2e-80 302.8 207 72.5
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 5.5e-80 302.0 314 46.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.8e-78 297.0 216 70.4
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 2.5e-77 293.1 195 73.3
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.7e-71 273.1 233 61.4
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 9.6e-69 264.6 332 48.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.1e-67 261.2 305 42.0
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 4.5e-66 255.8 267 50.2
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.1e-59 234.6 339 40.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 9.4e-56 221.5 147 70.7
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 7.4e-45 185.3 144 63.2
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.1e-43 181.4 228 46.5
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 5.3e-43 179.1 129 64.3
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 4.4e-37 159.5 103 77.7
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 2.7e-31 140.2 247 36.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.9e-25 120.2 88 63.6
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.2e-23 114.8 93 62.4
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.4e-22 111.3 70 71.4
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.1e-19 101.7 213 33.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-10 70.5 72 44.4
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 4.7e-07 59.7 44 54.5
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 4.0e-06 56.6 75 45.3
HanXRQChr04g0100421 Helianthus annuus HOM05D003194 ORTHO05D003790 6.8e-06 55.8 273 21.6
Nitab4.5_0004109g0030 Nicotiana tabacum HOM05D003194 ORTHO05D003790 6.8e-06 55.8 273 22.0
Sabra06G0061400 Salix brachista HOM05D003194 ORTHO05D003790 6.8e-06 55.8 273 20.9


User provided reference genes

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