Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 9.5e-76 287.0 166 100.0
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 1.3e-53 213.4 107 92.5
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 6.2e-51 204.5 107 88.8
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.4e-50 203.4 106 87.7
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 3.1e-50 202.2 107 88.8
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 9.0e-50 200.7 107 86.9
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 1.5e-49 199.9 107 86.9
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 9.9e-49 197.2 107 85.0
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 9.9e-49 197.2 107 83.2
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 2.9e-48 195.7 107 83.2
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 3.8e-48 195.3 107 83.2
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 6.4e-48 194.5 107 86.0
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 6.4e-48 194.5 107 86.0
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 1.4e-47 193.4 97 90.7
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 1.4e-47 193.4 97 90.7
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 1.9e-47 193.0 106 85.8
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 1.9e-47 193.0 106 84.9
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.2e-47 192.2 107 81.3
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 3.2e-47 192.2 107 84.1
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 4.2e-47 191.8 107 80.4
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 4.2e-47 191.8 107 82.2
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.4e-47 191.4 107 80.4
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.4e-47 191.4 107 80.4
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 7.1e-47 191.0 107 81.3
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 2.1e-46 189.5 97 89.7
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 2.1e-46 189.5 107 81.3
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.7e-46 189.1 107 81.3
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 2.7e-46 189.1 107 81.3
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 6.0e-46 188.0 107 80.4
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 6.0e-46 188.0 107 80.4
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 6.0e-46 188.0 108 82.4
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 6.0e-46 188.0 107 81.3
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 1.7e-45 186.4 107 84.1
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 1.7e-45 186.4 96 88.5
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 2.3e-45 186.0 107 84.1
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 2.3e-45 186.0 107 84.1
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 2.3e-45 186.0 107 80.4
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 2.3e-45 186.0 97 87.6
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 2.3e-45 186.0 107 77.6
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 3.0e-45 185.7 107 78.5
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 3.0e-45 185.7 108 82.4
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 3.9e-45 185.3 106 84.0
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 5.1e-45 184.9 108 80.6
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 6.6e-45 184.5 107 80.4
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 1.9e-44 183.0 108 76.9
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 2.5e-44 182.6 107 78.5
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 2.5e-44 182.6 107 78.5
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 5.6e-44 181.4 107 77.6
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 7.3e-44 181.0 107 77.6
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 7.3e-44 181.0 106 78.3
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 7.3e-44 181.0 107 82.2
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.3e-43 180.3 108 80.6
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 1.6e-43 179.9 107 76.6
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.6e-43 179.9 96 87.5
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.6e-43 179.9 96 87.5
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.6e-43 179.9 108 79.6
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 1.6e-43 179.9 108 78.7
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 2.1e-43 179.5 107 76.6
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 2.1e-43 179.5 100 81.0
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 2.1e-43 179.5 106 77.4
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 2.8e-43 179.1 107 76.6
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 2.8e-43 179.1 107 76.6
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 3.6e-43 178.7 107 76.6
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 3.6e-43 178.7 107 76.6
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 3.6e-43 178.7 107 76.6
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 3.6e-43 178.7 107 76.6
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 3.6e-43 178.7 108 79.6
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 3.6e-43 178.7 107 76.6
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 4.8e-43 178.3 107 76.6
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 4.8e-43 178.3 107 76.6
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 6.2e-43 177.9 107 77.6
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 6.2e-43 177.9 107 75.7
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 6.2e-43 177.9 104 78.8
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 8.1e-43 177.6 104 83.7
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 8.1e-43 177.6 107 76.6
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 8.1e-43 177.6 107 75.7
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 1.1e-42 177.2 107 75.7
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 1.1e-42 177.2 107 75.7
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 1.1e-42 177.2 107 75.7
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.1e-42 177.2 97 81.4
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 1.1e-42 177.2 97 83.5
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 1.1e-42 177.2 102 81.4
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 1.4e-42 176.8 107 76.6
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 1.4e-42 176.8 107 76.6
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 3.1e-42 175.6 107 75.7
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 3.1e-42 175.6 107 75.7
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 3.1e-42 175.6 107 75.7
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 4.0e-42 175.3 104 76.0
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 4.0e-42 175.3 107 74.8
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 4.0e-42 175.3 102 81.4
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 4.0e-42 175.3 98 82.7
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 4.0e-42 175.3 98 82.7
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 5.3e-42 174.9 107 74.8
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 6.9e-42 174.5 107 74.8
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 1.5e-41 173.3 107 75.7
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.0e-41 172.9 109 74.3
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 2.6e-41 172.6 104 75.0
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 2.6e-41 172.6 107 74.8
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 2.6e-41 172.6 104 75.0
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 5.8e-41 171.4 102 75.5
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 5.8e-41 171.4 102 79.4
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 9.9e-41 170.6 102 75.5
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 9.9e-41 170.6 108 76.9
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 9.9e-41 170.6 108 76.9
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 9.9e-41 170.6 108 76.9
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 9.9e-41 170.6 108 76.9
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 9.9e-41 170.6 108 76.9
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 1.3e-40 170.2 105 78.1
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 2.2e-40 169.5 101 75.2
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 2.9e-40 169.1 99 80.8
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 2.9e-40 169.1 104 75.0
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 3.8e-40 168.7 102 74.5
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 6.4e-40 167.9 104 75.0
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 1.4e-39 166.8 97 78.4
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 1.4e-39 166.8 101 78.2
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 1.4e-39 166.8 107 73.8
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 1.9e-39 166.4 97 77.3
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 1.9e-39 166.4 104 74.0
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 3.2e-39 165.6 101 71.3
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 4.2e-39 165.2 98 79.6
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 5.4e-39 164.9 97 76.3
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 5.4e-39 164.9 101 78.2
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 9.3e-39 164.1 105 71.4
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 9.3e-39 164.1 96 80.2
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 1.2e-38 163.7 102 73.5
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 2.1e-38 162.9 97 75.3
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 2.1e-38 162.9 107 71.0
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 2.7e-38 162.5 97 77.3
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 2.7e-38 162.5 101 73.3
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.5e-38 162.2 98 76.5
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 3.9e-37 158.7 101 72.3
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 3.3e-36 155.6 77 90.9
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 5.6e-36 154.8 93 72.0
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 8.1e-35 151.0 89 74.2
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 6.5e-32 141.4 94 68.1
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 3.3e-28 129.0 85 75.3
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 7.4e-28 127.9 67 82.1
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 1.2e-25 120.6 74 77.0
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 5.8e-25 118.2 74 73.0
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 3.2e-23 112.5 93 58.1
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 5.5e-23 111.7 93 58.1
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 7.1e-23 111.3 72 70.8
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 1.2e-22 110.5 83 61.4
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 1.6e-22 110.2 84 56.0
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 2.1e-22 109.8 69 75.4
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 1.0e-21 107.5 83 60.2
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 5.7e-20 101.7 86 54.7
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 1.3e-19 100.5 59 78.0
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.3e-19 100.5 70 70.0
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 1.6e-19 100.1 103 53.4
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 1.4e-15 87.0 75 58.7
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 1.9e-15 86.7 101 43.6
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 1.1e-12 77.4 50 70.0
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 2.6e-09 66.2 54 57.4
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.9e-07 60.1 83 37.3
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 3.2e-07 59.3 49 57.1
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 2.1e-06 56.6 37 75.7
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 2.7e-06 56.2 37 73.0
GSVIVG01008282001 Vitis vinifera HOM05D004512 ORTHO05D005355 7.9e-06 54.7 29 82.8


User provided reference genes

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