Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.4e-113 412.9 198 100.0
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 1.5e-56 223.4 205 53.7
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 5.1e-52 208.4 195 51.3
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.3e-50 203.8 191 52.9
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 2.8e-50 202.6 192 53.1
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 3.7e-50 202.2 191 52.9
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 3.7e-50 202.2 185 51.9
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 6.3e-50 201.4 191 49.7
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 1.1e-49 200.7 187 51.9
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-49 200.7 182 54.4
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.1e-49 200.7 191 52.4
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.1e-49 200.7 191 52.4
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.1e-49 200.7 195 52.3
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.8e-49 199.9 191 50.8
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 1.8e-49 199.9 196 52.0
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 2.4e-49 199.5 194 52.6
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 2.4e-49 199.5 193 50.8
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 3.1e-49 199.1 195 51.8
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 3.1e-49 199.1 191 50.8
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.1e-49 198.7 191 51.8
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 9.0e-49 197.6 188 51.1
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 3.4e-48 195.7 195 51.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 4.5e-48 195.3 194 51.0
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 4.5e-48 195.3 191 52.4
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 4.5e-48 195.3 194 51.0
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 5.9e-48 194.9 184 50.0
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 7.7e-48 194.5 185 49.7
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.3e-47 193.7 185 53.0
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 1.3e-47 193.7 189 49.2
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 2.2e-47 193.0 173 51.4
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 2.2e-47 193.0 192 50.5
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.2e-47 193.0 192 50.5
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 2.9e-47 192.6 197 49.2
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.9e-47 192.6 188 53.2
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 3.8e-47 192.2 183 51.9
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 5.0e-47 191.8 178 50.6
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 6.5e-47 191.4 184 51.6
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 6.5e-47 191.4 191 51.8
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 8.5e-47 191.0 201 50.2
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 8.5e-47 191.0 180 51.1
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 8.5e-47 191.0 187 49.7
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.1e-46 190.7 188 50.0
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 1.4e-46 190.3 193 49.2
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.4e-46 190.3 188 49.5
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.4e-46 190.3 195 49.2
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.9e-46 189.9 191 49.2
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.9e-46 189.9 191 50.8
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 2.5e-46 189.5 172 54.1
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 3.2e-46 189.1 185 49.7
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 3.2e-46 189.1 186 49.5
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 5.5e-46 188.3 191 49.2
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 5.5e-46 188.3 191 49.7
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 5.5e-46 188.3 172 51.2
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 5.5e-46 188.3 194 48.5
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 7.2e-46 188.0 185 49.2
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 7.2e-46 188.0 185 49.2
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 7.2e-46 188.0 187 51.3
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 9.4e-46 187.6 179 49.7
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 9.4e-46 187.6 181 48.1
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.2e-45 187.2 192 49.0
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.2e-45 187.2 192 49.0
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.6e-45 186.8 186 48.9
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.1e-45 186.4 182 50.0
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 2.1e-45 186.4 191 48.7
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 3.6e-45 185.7 190 50.5
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 3.6e-45 185.7 190 50.5
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 4.6e-45 185.3 189 48.7
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 6.1e-45 184.9 192 47.9
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.0e-44 184.1 190 50.5
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 1.8e-44 183.3 191 48.7
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 2.3e-44 183.0 178 48.9
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 3.0e-44 182.6 186 49.5
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 5.1e-44 181.8 183 47.0
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.5e-43 180.3 190 47.4
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 2.5e-43 179.5 183 47.0
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.3e-43 179.1 192 45.3
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 3.3e-43 179.1 190 47.4
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 7.4e-43 177.9 187 44.9
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.7e-43 177.6 175 48.6
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.7e-43 177.6 175 48.6
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.3e-42 177.2 192 46.4
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.3e-42 177.2 185 45.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.7e-42 176.8 189 48.1
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 2.2e-42 176.4 195 45.6
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 2.8e-42 176.0 190 46.8
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 3.7e-42 175.6 192 45.3
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 3.7e-42 175.6 181 46.4
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 4.8e-42 175.3 186 46.2
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 8.2e-42 174.5 190 48.9
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 8.2e-42 174.5 193 47.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.8e-41 173.3 199 45.2
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 1.8e-41 173.3 172 51.2
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.4e-41 172.9 199 45.2
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 2.4e-41 172.9 206 45.6
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.4e-41 172.9 190 45.8
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 5.3e-41 171.8 168 51.2
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 9.1e-41 171.0 202 46.5
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 9.1e-41 171.0 180 44.4
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 1.2e-40 170.6 206 45.6
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.0e-40 169.9 190 45.8
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 2.0e-40 169.9 180 45.6
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.7e-40 167.9 172 50.0
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.7e-39 166.8 172 50.0
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 2.2e-39 166.4 206 42.2
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.1e-38 164.1 175 46.9
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.4e-38 163.7 197 44.7
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 2.5e-38 162.9 167 50.3
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 9.4e-38 161.0 197 44.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 6.1e-37 158.3 188 44.1
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.0e-36 157.5 188 43.1
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.2e-34 149.8 186 41.9
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.4e-33 147.1 191 41.4
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.2e-32 144.1 193 38.9
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.6e-32 142.9 255 31.0
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 7.7e-32 141.4 218 36.2
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 2.6e-27 126.3 160 43.8
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 2.8e-26 122.9 202 34.7
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 3.5e-24 115.9 125 48.8
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 9.4e-22 107.8 129 45.7
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.4e-22 107.8 97 48.5
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 9.4e-22 107.8 141 45.4
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 2.7e-21 106.3 206 31.6
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 4.7e-21 105.5 143 44.1
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 8.0e-21 104.8 129 43.4
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.2e-20 102.1 129 44.2
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 5.7e-19 98.6 72 62.5
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.3e-18 97.4 131 43.5
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 1.1e-17 94.4 172 31.4
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 5.9e-16 88.6 119 43.7
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.7e-15 87.0 63 61.9
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 2.2e-15 86.7 348 22.4
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 1.9e-14 83.6 85 47.1
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.5e-14 83.2 57 59.6
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 3.2e-14 82.8 240 25.8
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.0e-12 77.8 52 57.7
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.4e-11 72.4 47 61.7
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 8.3e-10 68.2 49 57.1
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.3e-07 60.8 65 40.0
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 6.6e-07 58.5 32 71.9
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 6.6e-07 58.5 124 34.7
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 7.3e-06 55.1 32 65.6
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 7.3e-06 55.1 32 65.6
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.5e-06 54.7 32 65.6


User provided reference genes

Program Settings