Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 3.6e-312 1074.3 525 100.0
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 3.7e-275 951.0 554 85.2
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.7e-257 891.7 519 82.7
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.7e-256 889.0 519 82.7
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.3e-256 888.6 519 82.9
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 1.5e-255 885.9 526 82.9
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 2.8e-254 881.7 525 80.6
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 3.6e-254 881.3 525 81.1
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 4.7e-254 880.9 521 80.0
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.4e-253 879.4 525 80.8
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 1.5e-252 875.9 519 80.2
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.6e-252 875.2 525 80.8
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 4.9e-251 870.9 519 80.5
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 1.4e-250 869.4 524 80.2
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 4.1e-250 867.8 525 80.6
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.6e-249 865.9 524 79.6
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 2.8e-246 855.1 525 79.0
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 3.1e-245 851.7 524 77.3
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 5.2e-245 850.9 524 78.6
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.2e-244 849.7 524 78.1
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 7.5e-244 847.0 522 77.6
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 8.3e-243 843.6 495 80.4
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 7.1e-242 840.5 524 77.5
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 2.1e-241 839.0 524 77.7
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 4.6e-241 837.8 520 77.7
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.6e-241 837.8 524 77.1
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 7.8e-241 837.0 520 78.1
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.9e-239 832.4 519 77.6
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.9e-239 832.4 524 75.8
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.9e-239 832.4 518 78.6
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 5.6e-239 830.9 524 77.1
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 5.6e-239 830.9 524 76.1
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 7.3e-239 830.5 521 77.2
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 9.5e-239 830.1 524 76.3
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-238 829.7 524 76.5
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.2e-238 829.7 520 76.3
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.2e-238 829.7 524 76.9
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 520 76.2
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 6.2e-238 827.4 550 73.5
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 6.2e-238 827.4 524 76.1
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.8e-237 825.9 525 76.8
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 2.3e-237 825.5 525 77.0
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.1e-237 825.1 524 76.7
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 3.1e-237 825.1 524 75.8
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 1.5e-236 822.8 524 74.8
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 1.5e-236 822.8 524 76.0
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.5e-236 822.8 525 76.0
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 3.4e-236 821.6 524 75.4
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.4e-236 821.2 525 75.6
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 5.8e-236 820.8 524 76.1
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 7.6e-236 820.5 525 75.4
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 9.9e-236 820.1 528 75.6
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.7e-235 819.3 524 76.1
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.7e-235 819.3 525 75.2
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.2e-235 818.9 528 75.6
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 2.2e-235 818.9 519 76.9
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.7e-235 818.1 528 75.4
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.7e-235 818.1 528 75.6
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 4.9e-235 817.8 525 75.0
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 4.9e-235 817.8 522 76.2
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 4.9e-235 817.8 545 72.8
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.1e-234 816.6 524 74.4
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 5.4e-234 814.3 524 75.4
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 5.4e-234 814.3 524 75.4
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 5.4e-234 814.3 525 75.4
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 9.2e-234 813.5 525 75.4
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.7e-233 812.0 524 74.6
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 4.6e-233 811.2 525 73.9
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.7e-232 809.3 525 74.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 5.1e-232 807.7 520 74.2
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 5.1e-232 807.7 520 74.2
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 5.1e-232 807.7 534 74.0
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 8.6e-232 807.0 524 74.8
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 1.5e-231 806.2 502 77.3
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.9e-231 805.8 521 73.9
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.9e-231 805.8 519 73.2
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 2.5e-231 805.4 525 73.1
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 2.5e-231 805.4 525 73.3
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 2.5e-231 805.4 525 73.3
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 3.3e-231 805.1 521 74.3
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 4.3e-231 804.7 525 73.3
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 5.6e-231 804.3 525 73.0
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 7.3e-231 803.9 502 77.1
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 7.3e-231 803.9 525 73.1
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 7.3e-231 803.9 524 74.0
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.6e-230 802.7 521 73.9
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 2.1e-230 802.4 521 73.7
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 2.1e-230 802.4 521 73.7
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 2.1e-230 802.4 520 76.0
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.8e-230 802.0 521 73.7
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.6e-230 801.6 558 71.3
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 6.8e-229 797.3 524 73.5
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 6.8e-229 797.3 472 80.1
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 8.9e-229 797.0 466 81.1
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.5e-228 796.2 524 73.9
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.3e-227 793.1 532 72.2
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 6.4e-227 790.8 520 74.6
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 6.4e-227 790.8 534 72.7
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 8.4e-227 790.4 525 73.7
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.4e-226 789.6 521 72.6
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.4e-226 788.9 520 74.6
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 9.3e-226 786.9 493 77.3
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 9.3e-226 786.9 524 72.7
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.2e-225 786.6 546 71.4
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.6e-225 786.2 523 74.0
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 6.0e-225 784.3 523 73.4
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 7.8e-225 783.9 523 73.4
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 7.8e-225 783.9 525 74.7
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 1.7e-224 782.7 521 72.2
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 5.1e-224 781.2 519 73.0
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 2.5e-223 778.9 524 72.5
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 7.3e-223 777.3 470 79.8
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 2.4e-221 772.3 524 71.2
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 2.0e-220 769.2 520 71.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 5.8e-220 767.7 524 71.6
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 5.8e-220 767.7 472 78.4
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 7.6e-220 767.3 517 71.6
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 7.6e-220 767.3 524 72.5
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.1e-218 763.5 520 72.3
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 3.5e-217 758.4 519 71.1
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.6e-217 758.1 470 77.0
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 7.9e-217 757.3 469 78.3
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 7.9e-217 757.3 517 72.0
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 8.7e-216 753.8 470 78.1
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 3.3e-215 751.9 470 76.8
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 3.6e-214 748.4 521 70.8
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 4.8e-214 748.0 521 70.6
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.1e-213 746.9 524 71.4
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 5.3e-213 744.6 524 71.0
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 4.2e-210 734.9 554 67.5
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 7.1e-210 734.2 524 67.9
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 2.7e-209 732.3 525 68.2
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 4.6e-209 731.5 583 65.2
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.0e-208 730.3 524 67.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.8e-206 722.2 518 68.5
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 3.2e-202 708.8 524 67.6
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.6e-201 706.4 520 67.9
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.1e-199 700.3 565 64.2
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 5.7e-199 698.0 524 67.2
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 6.1e-193 677.9 524 65.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 3.4e-188 662.1 385 81.3
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 2.9e-187 659.1 480 69.8
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 3.8e-187 658.7 507 66.7
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 1.8e-181 639.8 480 66.0
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 9.1e-181 637.5 372 80.4
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.7e-177 625.9 380 79.5
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 8.0e-169 597.8 484 59.1
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 8.8e-168 594.3 556 56.8
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.8e-165 586.6 446 60.5
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 2.5e-154 549.7 471 56.5
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 1.4e-152 543.9 450 58.7
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 5.9e-140 501.9 352 69.6
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.3e-134 484.2 291 81.1
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.1e-125 452.6 297 74.4
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.2e-124 451.1 265 79.2
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 2.1e-124 450.3 294 71.8
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 6.4e-118 428.7 293 73.7
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 4.1e-117 426.0 292 74.0
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 2.7e-100 370.2 247 73.3
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 3.0e-99 366.7 246 69.9
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.7e-75 285.4 204 67.6
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.5e-58 231.5 468 33.5
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.1e-52 211.1 469 31.3
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 4.7e-52 209.9 132 73.5
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.0e-36 156.0 206 45.1
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.6e-31 141.7 109 60.6
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 6.6e-30 136.3 145 47.6
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 1.7e-22 111.7 90 62.2
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.0e-20 102.8 142 46.5
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 1.2e-18 99.0 58 75.9
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 1.5e-18 98.6 149 37.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 4.1e-16 90.5 60 70.0
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.2e-12 76.6 161 37.3
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 2.1e-07 61.6 55 63.6


User provided reference genes

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