Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 7.7e-92 340.5 176 100.0
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 2.0e-60 236.1 174 75.9
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 9.5e-42 174.1 183 56.3
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 2.0e-39 166.4 165 58.8
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 1.3e-38 163.7 191 56.5
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 1.7e-38 163.3 189 55.0
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 6.4e-38 161.4 183 56.3
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.9e-37 159.8 179 57.5
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 4.0e-32 142.1 176 54.5
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.7e-30 136.7 152 55.3
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 4.9e-30 135.2 147 56.5
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 4.9e-30 135.2 147 56.5
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 1.4e-29 133.7 169 49.1
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.4e-29 133.7 193 49.7
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 7.8e-28 127.9 133 55.6
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.3e-27 127.1 130 56.9
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.7e-27 126.7 111 62.2
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 1.5e-26 123.6 146 50.7
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.9e-26 123.2 155 48.4
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 5.6e-26 121.7 159 49.7
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 1.6e-25 120.2 171 48.0
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.6e-25 120.2 146 48.6
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 6.2e-25 118.2 135 53.3
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 6.2e-25 118.2 166 44.6
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.1e-24 117.5 148 47.3
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.8e-24 116.7 175 44.6
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 4.0e-24 115.5 128 54.7
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 9.0e-24 114.4 148 48.6
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.2e-23 114.0 162 43.8
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.0e-23 113.2 170 46.5
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 2.0e-23 113.2 144 49.3
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.0e-23 113.2 149 48.3
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 4.4e-23 112.1 187 43.3
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 4.4e-23 112.1 99 59.6
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.2e-22 109.8 142 49.3
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.2e-22 109.8 167 41.3
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.2e-22 109.8 154 47.4
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 4.9e-22 108.6 189 41.8
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 4.9e-22 108.6 140 48.6
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.4e-21 107.1 137 46.0
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 1.9e-21 106.7 193 40.4
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 5.4e-21 105.1 160 45.0
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 2.7e-20 102.8 191 38.7
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 6.0e-20 101.7 191 41.4
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 6.0e-20 101.7 167 45.5
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 6.0e-20 101.7 152 47.4
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 2.3e-19 99.8 185 41.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 3.0e-19 99.4 148 44.6
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 1.1e-18 97.4 139 48.2
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 1.1e-18 97.4 122 49.2
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.5e-18 96.3 141 45.4
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 5.6e-18 95.1 110 51.8
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 7.3e-18 94.7 107 50.5
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 1.3e-17 94.0 143 45.5
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.6e-17 93.6 144 47.2
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 1.6e-17 93.6 157 40.1
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 2.1e-17 93.2 171 39.8
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.8e-17 92.8 196 38.3
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 6.2e-17 91.7 178 39.3
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 6.2e-17 91.7 179 39.1
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 6.2e-17 91.7 142 44.4
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 8.1e-17 91.3 183 38.3
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.8e-16 90.1 185 37.3
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.4e-16 89.7 121 49.6
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 4.0e-16 89.0 159 42.8
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 5.3e-16 88.6 143 42.7
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 5.3e-16 88.6 165 41.2
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 6.9e-16 88.2 188 36.2
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 6.9e-16 88.2 187 38.0
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 3.4e-15 85.9 131 45.8
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 5.8e-15 85.1 170 38.8
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 9.9e-15 84.3 207 32.9
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 1.3e-14 84.0 169 39.1
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 1.3e-14 84.0 150 40.7
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 1.3e-14 84.0 154 40.3
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 2.2e-14 83.2 67 65.7
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 2.9e-14 82.8 180 37.8
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 6.4e-14 81.6 132 46.2
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 6.4e-14 81.6 186 37.6
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 8.4e-14 81.3 159 36.5
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 1.4e-13 80.5 178 38.2
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 4.2e-13 79.0 140 40.0
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.2e-12 77.4 162 37.7
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.2e-12 77.4 130 40.8
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 2.7e-12 76.3 131 38.2
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.3e-11 73.9 173 35.3
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 1.8e-11 73.6 122 45.1
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 1.8e-11 73.6 122 45.1
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 2.3e-11 73.2 51 78.4
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 3.9e-11 72.4 192 32.8
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 5.1e-11 72.0 56 62.5
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.1e-10 70.9 109 39.4
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.5e-10 69.7 173 35.3
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 2.5e-10 69.7 122 38.5
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.3e-09 67.4 66 50.0
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 1.6e-09 67.0 173 34.1
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 1.6e-09 67.0 173 34.1
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 2.1e-09 66.6 173 34.1
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 8.1e-09 64.7 143 37.1
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.4e-08 63.2 154 35.7
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 5.3e-08 62.0 98 40.8
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 9.0e-08 61.2 189 32.3
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 9.0e-08 61.2 71 53.5
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 9.0e-08 61.2 71 53.5
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 9.0e-08 61.2 71 53.5
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 1.2e-07 60.8 153 35.3
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 7.6e-07 58.2 131 35.1
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 1.3e-06 57.4 131 34.4
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 4.9e-06 55.5 157 28.0
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 6.4e-06 55.1 146 34.2


User provided reference genes

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