Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 2.5e-67 258.8 152 100.0
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 1.2e-53 213.4 146 80.1
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 2.9e-47 192.2 145 75.9
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 1.4e-46 189.9 145 73.8
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 5.5e-46 188.0 146 71.2
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 7.2e-46 187.6 146 80.1
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 7.2e-46 187.6 145 79.3
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 7.2e-46 187.6 148 79.1
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 1.4e-44 183.3 147 76.9
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 1.8e-44 183.0 145 77.2
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 2.0e-43 179.5 146 77.4
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 3.3e-43 178.7 139 82.0
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 7.4e-43 177.6 146 76.7
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 7.4e-43 177.6 146 62.3
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.4e-41 173.3 148 58.8
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 2.4e-41 172.6 146 75.3
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 2.4e-41 172.6 147 74.8
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 7.0e-41 171.0 148 63.5
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 1.2e-40 170.2 148 58.1
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 1.2e-40 170.2 126 71.4
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.6e-40 169.9 148 64.2
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 2.6e-40 169.1 141 75.2
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 4.5e-40 168.3 133 60.2
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 4.5e-40 168.3 133 60.2
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 4.5e-40 168.3 133 60.2
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 5.9e-40 167.9 148 61.5
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 5.9e-40 167.9 94 77.7
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 7.7e-40 167.5 149 56.4
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.3e-39 166.8 131 64.1
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 1.7e-39 166.4 94 75.5
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.7e-39 166.4 94 75.5
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 2.2e-39 166.0 132 63.6
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 2.9e-39 165.6 94 74.5
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 6.5e-39 164.5 139 59.7
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 1.5e-38 163.3 144 66.0
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 1.9e-38 162.9 140 72.9
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 1.9e-38 162.9 151 69.5
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 1.9e-38 162.9 94 74.5
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.9e-38 162.9 149 55.7
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 3.2e-38 162.2 84 81.0
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 3.2e-38 162.2 91 78.0
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 1.2e-37 160.2 143 68.5
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 1.6e-37 159.8 140 73.6
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 2.1e-37 159.5 145 71.0
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 2.1e-37 159.5 145 71.0
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 2.1e-37 159.5 145 71.0
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 2.1e-37 159.5 132 59.1
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 3.6e-37 158.7 149 67.8
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 4.7e-37 158.3 138 55.8
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 6.1e-37 157.9 94 75.5
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 6.1e-37 157.9 151 53.6
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 8.0e-37 157.5 93 73.1
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 8.0e-37 157.5 95 72.6
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 8.0e-37 157.5 126 67.5
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 8.0e-37 157.5 143 63.6
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.0e-36 157.1 85 78.8
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 1.4e-36 156.8 144 55.6
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 1.4e-36 156.8 75 89.3
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.8e-36 156.4 82 79.3
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.8e-36 156.4 82 79.3
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 1.8e-36 156.4 141 71.6
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 2.3e-36 156.0 134 73.9
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 2.3e-36 156.0 84 76.2
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 3.0e-36 155.6 141 73.0
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 3.0e-36 155.6 93 74.2
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 5.2e-36 154.8 128 68.0
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 5.2e-36 154.8 95 71.6
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 6.7e-36 154.5 95 70.5
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 6.7e-36 154.5 84 75.0
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 8.8e-36 154.1 140 56.4
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 8.8e-36 154.1 82 79.3
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 1.2e-35 153.7 81 80.2
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 1.2e-35 153.7 94 70.2
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 1.2e-35 153.7 154 57.8
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 1.5e-35 153.3 94 70.2
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.5e-35 153.3 94 71.3
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-35 153.3 94 71.3
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-35 153.3 93 71.0
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 1.5e-35 153.3 94 72.3
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 1.5e-35 153.3 93 71.0
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 1.5e-35 153.3 145 66.2
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 2.0e-35 152.9 82 79.3
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 2.0e-35 152.9 145 65.5
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 2.0e-35 152.9 79 78.5
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 2.6e-35 152.5 94 72.3
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 2.6e-35 152.5 94 72.3
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 2.6e-35 152.5 93 71.0
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 3.3e-35 152.1 144 70.1
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 3.3e-35 152.1 95 71.6
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 4.4e-35 151.8 86 74.4
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 5.7e-35 151.4 91 71.4
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 5.7e-35 151.4 75 82.7
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 5.7e-35 151.4 133 68.4
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 9.7e-35 150.6 79 79.7
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 3.7e-34 148.7 138 57.2
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 4.8e-34 148.3 93 69.9
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 4.8e-34 148.3 123 68.3
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 4.8e-34 148.3 76 82.9
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 8.2e-34 147.5 125 69.6
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 1.4e-33 146.7 76 81.6
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 1.8e-33 146.4 137 54.7
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 2.4e-33 146.0 123 71.5
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 2.4e-33 146.0 74 83.8
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 4.1e-33 145.2 134 70.1
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 4.1e-33 145.2 135 66.7
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 7.0e-33 144.4 142 61.3
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 9.1e-33 144.1 142 60.6
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 1.2e-32 143.7 129 69.8
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 2.0e-32 142.9 134 56.0
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 5.9e-32 141.4 153 54.2
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 2.7e-29 132.5 94 64.9
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.4e-28 130.2 143 51.0
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 6.8e-28 127.9 68 82.4
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 1.7e-26 123.2 89 58.4
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 1.1e-25 120.6 85 60.0
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 1.6e-24 116.7 99 54.5
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 2.2e-23 112.8 86 62.8
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 2.9e-23 112.5 105 56.2
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 3.8e-23 112.1 104 52.9
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 5.0e-23 111.7 111 73.9
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 1.1e-22 110.5 106 75.5
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 3.2e-22 109.0 54 85.2
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 7.2e-22 107.8 53 83.0
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 1.6e-21 106.7 67 65.7
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 2.1e-21 106.3 101 77.2
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 3.4e-19 99.0 75 54.7
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 1.7e-18 96.7 52 78.8
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 1.7e-18 96.7 78 56.4
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 9.2e-17 90.9 60 63.3
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 2.0e-16 89.7 97 71.1
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 1.0e-15 87.4 139 38.8
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 2.9e-15 85.9 75 50.7
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 6.6e-15 84.7 65 60.0
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 2.1e-13 79.7 38 86.8
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 2.1e-13 79.7 53 66.0
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 2.6e-11 72.8 75 44.0
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 1.7e-10 70.1 76 44.7
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 8.3e-10 67.8 70 68.6
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 3.5e-08 62.4 39 66.7
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 4.6e-08 62.0 46 52.2
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 1.0e-07 60.8 45 53.3
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 1.3e-07 60.5 47 57.4


User provided reference genes

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