Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 1.1e-201 706.4 358 100.0
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 8.4e-170 600.5 355 85.1
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 2.1e-168 595.9 355 84.5
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 5.1e-167 591.3 358 84.4
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 1.5e-166 589.7 363 83.5
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 3.1e-164 582.0 357 83.2
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 5.3e-164 581.3 362 82.0
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.5e-163 579.7 361 82.3
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 2.4e-161 572.4 355 82.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 6.7e-159 564.3 361 80.1
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 7.4e-150 534.3 358 75.1
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 6.2e-149 531.2 356 73.0
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 1.1e-148 530.4 357 73.9
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 5.8e-147 524.6 356 72.8
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 1.0e-146 523.9 356 73.0
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 1.7e-146 523.1 359 74.7
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 8.4e-146 520.8 357 71.4
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 3.2e-145 518.8 356 73.3
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 5.5e-145 518.1 358 72.3
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 2.7e-144 515.8 357 71.7
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 3.0e-143 512.3 359 71.0
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 8.7e-143 510.8 355 73.2
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 7.4e-142 507.7 356 76.4
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 9.7e-142 507.3 356 71.9
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 1.6e-141 506.5 358 71.2
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 3.7e-141 505.4 358 70.4
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 8.2e-141 504.2 358 70.1
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 1.1e-140 503.8 361 70.6
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 1.1e-140 503.8 355 70.4
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 1.4e-140 503.4 361 70.6
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 2.4e-140 502.7 355 71.5
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 2.4e-140 502.7 355 71.8
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 3.1e-140 502.3 355 71.3
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 4.1e-140 501.9 355 71.3
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 4.1e-140 501.9 355 71.3
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 4.1e-140 501.9 385 68.3
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 5.3e-140 501.5 355 71.3
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 6.9e-140 501.1 359 70.8
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 9.0e-140 500.7 356 71.1
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 2.0e-139 499.6 356 69.9
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 2.0e-139 499.6 356 73.0
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 2.6e-139 499.2 355 71.0
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.9e-139 498.0 356 72.2
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 5.9e-139 498.0 356 72.2
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 4.2e-137 491.9 356 71.9
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 4.2e-137 491.9 355 69.6
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 1.2e-136 490.3 356 67.7
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 2.1e-136 489.6 356 70.2
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 3.6e-136 488.8 356 68.0
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 3.6e-136 488.8 356 67.4
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 6.1e-136 488.0 357 72.3
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 1.8e-135 486.5 357 68.9
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 3.0e-135 485.7 355 70.1
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 6.7e-135 484.6 360 70.6
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 3.3e-134 482.3 361 67.6
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 4.3e-134 481.9 355 69.9
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 5.7e-134 481.5 355 69.6
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 7.4e-134 481.1 357 67.2
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 9.7e-134 480.7 355 69.3
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 9.7e-134 480.7 361 67.9
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 1.7e-133 479.9 356 68.8
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 4.8e-133 478.4 355 69.3
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 1.1e-132 477.2 356 68.3
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 1.4e-132 476.9 361 66.5
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 1.3e-130 470.3 356 66.6
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 1.3e-130 470.3 355 67.3
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 8.5e-130 467.6 356 66.3
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 6.1e-128 461.5 357 66.9
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 1.8e-127 459.9 356 65.7
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.0e-127 459.1 357 66.4
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 3.9e-127 458.8 359 64.3
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 2.6e-126 456.1 386 61.9
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 4.4e-126 455.3 313 73.2
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 2.8e-125 452.6 357 65.0
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 1.8e-124 449.9 355 64.2
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 3.4e-123 445.7 357 64.7
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 2.9e-122 442.6 358 62.6
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 8.5e-122 441.0 360 61.7
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 4.2e-121 438.7 356 62.1
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 5.5e-121 438.3 353 64.0
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 9.4e-121 437.6 361 63.7
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 1.6e-120 436.8 473 53.7
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 6.1e-120 434.9 361 63.7
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 3.9e-119 432.2 356 63.8
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 2.6e-115 419.5 357 59.7
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 1.2e-112 410.6 371 58.5
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 2.7e-112 409.5 375 57.9
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 6.5e-106 388.3 354 55.4
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 2.7e-104 382.9 355 58.3
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 6.8e-103 378.3 258 74.0
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.2e-96 357.5 257 68.5
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.8e-95 353.6 252 68.3
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 4.0e-95 352.4 359 55.4
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 4.9e-93 345.5 348 50.0
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 1.1e-92 344.4 249 69.5
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.5e-86 323.9 376 46.5
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 8.3e-85 318.2 354 48.0
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 2.3e-82 310.1 296 57.8
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.2e-80 304.3 359 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 6.2e-80 302.0 353 45.9
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 4.4e-78 295.8 356 48.9
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.9e-76 290.4 356 45.8
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 1.6e-75 287.3 201 73.1
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 7.8e-75 285.0 346 46.0
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 3.1e-71 273.1 201 66.2
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 7.8e-67 258.5 344 39.2
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 4.7e-64 249.2 345 40.6
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 6.2e-64 248.8 349 41.5
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 8.1e-48 195.3 213 52.1
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.4e-44 184.5 147 65.3
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 2.4e-44 183.7 149 64.4
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 1.5e-41 174.5 152 64.5
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 9.3e-36 155.2 399 29.3
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 2.3e-34 150.6 97 78.4
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.9e-33 147.5 183 49.7
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 6.9e-31 139.0 360 30.6
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 7.6e-30 135.6 100 65.0
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 2.9e-29 133.7 133 57.9
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 2.9e-29 133.7 94 72.3
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 3.8e-29 133.3 134 57.5
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 2.7e-27 127.1 99 64.6
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.5e-25 121.3 128 50.8
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 7.4e-25 119.0 84 70.2
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 2.2e-24 117.5 92 65.2
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 1.2e-19 101.7 97 58.8
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 1.2e-19 101.7 97 58.8
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 6.1e-19 99.4 85 62.4
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.8e-18 97.8 84 61.9
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.7e-14 82.4 93 52.7
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 1.7e-13 81.3 82 57.3
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 2.2e-13 80.9 51 70.6


User provided reference genes

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