Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 0.0e+00 2075.8 1100 100.0
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 0.0e+00 1183.7 985 65.9
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 2.6e-206 723.4 616 63.5
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 2.7e-158 563.9 1247 35.9
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 9.2e-151 538.9 1244 35.4
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 3.2e-143 513.8 1258 34.5
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 7.1e-143 512.7 1243 33.6
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 3.9e-141 506.9 1253 33.9
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 1.6e-139 501.5 1213 35.0
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 2.8e-139 500.7 1238 34.2
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 3.6e-139 500.4 1244 34.5
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 5.2e-138 496.5 1252 33.3
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 2.0e-137 494.6 1243 34.0
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 4.1e-135 486.9 1230 34.6
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 1.9e-132 478.0 1250 33.4
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 2.0e-129 468.0 1249 33.0
Lalb_Chr22g0352251 Lupinus albus HOM05D004021 ORTHO05D003767 3.4e-129 467.2 356 71.9
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 7.1e-127 459.5 1249 33.5
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 5.1e-125 453.4 1195 33.8
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 3.9e-117 427.2 1205 31.8
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 5.1e-117 426.8 1169 32.5
Lalb_Chr14g0372311 Lupinus albus HOM05D004021 ORTHO05D003767 8.5e-64 250.0 967 28.7
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 4.0e-53 214.5 1148 24.3
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.5e-52 212.6 1332 24.7
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 1.7e-51 209.1 1323 23.9
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 1.3e-48 199.5 1202 23.5
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 5.2e-45 187.6 1327 24.0
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 2.3e-40 172.2 983 25.2
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 8.3e-35 153.7 1302 23.4
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 3.2e-34 151.8 1024 23.6
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.6e-33 149.4 1297 22.4
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 2.5e-31 142.1 995 24.2
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 4.3e-31 141.4 1271 23.5
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 5.6e-31 141.0 1320 22.7
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.1e-30 139.0 1346 22.4
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 3.6e-30 138.3 1352 23.7
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 1.2e-28 133.3 1354 22.7
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 5.8e-28 131.0 1331 22.2
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 5.8e-28 131.0 1343 22.4
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 5.8e-28 131.0 1336 22.2
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 9.9e-28 130.2 1314 21.8
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 2.9e-27 128.6 1262 22.0
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.9e-27 128.6 1297 22.4
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 4.9e-27 127.9 1320 21.9
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 2.1e-25 122.5 1069 22.9
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.7e-24 119.4 1281 21.5
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 3.0e-24 118.6 1281 21.5
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 2.5e-23 115.5 323 29.4
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 2.1e-22 112.5 1226 21.8
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 3.6e-22 111.7 781 23.4
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 8.1e-22 110.5 206 34.5
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 1.8e-21 109.4 991 21.5
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 2.0e-20 105.9 1008 22.3
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 3.4e-20 105.1 1328 20.9
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 1.7e-19 102.8 892 22.6
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 3.8e-19 101.7 1396 21.3
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 3.8e-19 101.7 1083 22.6
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.9e-18 99.4 1255 21.1
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 7.1e-18 97.4 919 22.0
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 1.6e-17 96.3 90 47.8
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 6.0e-17 94.4 989 22.2
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 1.0e-16 93.6 850 23.4
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.3e-16 93.2 1177 21.7
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.7e-16 92.8 1166 21.3
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.7e-16 92.8 866 22.3
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 6.6e-16 90.9 371 29.6
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 5.6e-15 87.8 118 39.8
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 2.1e-14 85.9 122 39.3
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 4.7e-14 84.7 78 53.8
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 1.1e-13 83.6 89 44.9
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 1.1e-13 83.6 89 44.9
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 1.1e-13 83.6 89 44.9
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.1e-13 83.6 160 38.1
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 1.8e-13 82.8 1054 22.5
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.4e-13 82.4 277 26.4
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 2.4e-13 82.4 922 22.1
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 3.1e-13 82.0 89 42.7
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 5.2e-13 81.3 305 25.9
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 9.0e-13 80.5 261 30.3
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.2e-12 80.1 88 44.3
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.2e-12 80.1 79 44.3
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.5e-12 79.7 89 42.7
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 1.5e-12 79.7 189 36.0
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 2.6e-12 79.0 89 42.7
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 2.6e-12 79.0 88 40.9
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 3.4e-12 78.6 162 29.6
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 3.4e-12 78.6 89 43.8
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.4e-12 78.2 155 33.5
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 5.8e-12 77.8 86 45.3
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 7.6e-12 77.4 289 27.7
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 7.6e-12 77.4 143 33.6
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 2.2e-11 75.9 287 24.4
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 2.9e-11 75.5 1065 20.7
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 2.9e-11 75.5 91 39.6
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 2.9e-11 75.5 148 32.4
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 3.8e-11 75.1 107 37.4
VMungo0647G2380 Vigna mungo HOM05D058389 ORTHO05D003767 6.4e-11 74.3 290 26.6
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 8.4e-11 73.9 79 40.5
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 8.4e-11 73.9 273 25.6
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 8.4e-11 73.9 289 26.3
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 1.1e-10 73.6 80 46.2
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.4e-10 73.2 95 40.0
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 1.9e-10 72.8 273 25.3
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 2.4e-10 72.4 1170 20.8
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 3.2e-10 72.0 107 34.6
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 3.2e-10 72.0 104 38.5
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 4.2e-10 71.6 1092 21.2
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 4.2e-10 71.6 132 36.4
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 4.2e-10 71.6 287 25.1
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 5.4e-10 71.2 131 33.6
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 5.4e-10 71.2 88 43.2
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 7.1e-10 70.9 80 45.0
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 7.1e-10 70.9 111 32.4
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 9.3e-10 70.5 106 37.7
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.2e-09 70.1 86 41.9
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 1.2e-09 70.1 277 27.8
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 1.6e-09 69.7 84 45.2
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.1e-09 69.3 125 34.4
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 6.0e-09 67.8 277 24.5
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 6.0e-09 67.8 80 41.2
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 6.0e-09 67.8 98 33.7
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 7.8e-09 67.4 1151 21.3
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 7.8e-09 67.4 106 34.9
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 7.8e-09 67.4 128 33.6
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 1.0e-08 67.0 274 23.7
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.3e-08 66.6 273 24.9
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.7e-08 66.2 78 46.2
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 2.3e-08 65.9 273 24.5
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.9e-08 65.1 84 42.9
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.9e-08 65.1 104 35.6
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 5.1e-08 64.7 97 34.0
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 6.6e-08 64.3 277 24.5
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 6.6e-08 64.3 287 24.7
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 6.6e-08 64.3 322 27.0
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 6.6e-08 64.3 104 36.5
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 6.6e-08 64.3 129 35.7
Eucgr.E03518 Eucalyptus grandis HOM05D004021 ORTHO05D003767 8.7e-08 63.9 495 26.3
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 8.7e-08 63.9 93 35.5
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 1.1e-07 63.5 64 43.8
SEGI_37840 Sequoiadendron giganteum HOM05D028836 ORTHO05D003767 1.5e-07 63.2 60 43.3
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 1.5e-07 63.2 764 21.5
Phvul.008G216900 Phaseolus vulgaris HOM05D058389 ORTHO05D003767 1.9e-07 62.8 304 23.4
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 3.3e-07 62.0 271 25.1
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 3.3e-07 62.0 85 35.3
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 1.3e-06 60.1 270 24.8
arahy.Tifrunner.gnm1.ann1.9H9I7P Arachis hypogaea HOM05D000916 ORTHO05D008653 2.1e-06 59.3 47 66.0
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 2.1e-06 59.3 1136 20.0
Lalb_Chr01g0009441 Lupinus albus HOM05D000916 ORTHO05D008653 2.8e-06 58.9 47 68.1
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 3.6e-06 58.5 109 32.1
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 4.8e-06 58.2 61 44.3
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 4.8e-06 58.2 1096 21.6
Phvul.001G269000 Phaseolus vulgaris HOM05D000916 ORTHO05D008653 8.1e-06 57.4 47 63.8
SEGI_38675 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 8.1e-06 57.4 57 42.1


User provided reference genes

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