Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 0.0e+00 1334.3 705 100.0
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 4.6e-196 688.7 822 52.6
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 2.5e-194 682.9 837 51.3
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 2.9e-190 669.5 696 59.6
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 6.7e-187 658.3 734 54.4
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 4.0e-184 649.0 709 54.6
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 9.0e-184 647.9 722 55.1
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.3e-166 590.9 938 43.3
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.9e-166 589.7 723 51.6
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 6.1e-164 582.0 715 50.6
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 5.1e-163 578.9 717 50.8
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.7e-158 563.9 855 45.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 3.0e-155 553.1 648 53.7
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 8.8e-139 498.4 953 39.9
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 3.0e-131 473.4 722 44.9
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 1.4e-112 411.4 601 47.1
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 7.1e-104 382.5 778 38.7
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 4.7e-100 369.8 935 34.3
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.9e-93 347.8 773 36.4
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 3.6e-92 343.6 757 36.3
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 7.6e-90 335.9 759 35.2
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 3.8e-89 333.6 717 36.8
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 7.1e-88 329.3 731 36.4
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 2.7e-87 327.4 785 35.4
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.0e-86 325.5 739 35.9
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.3e-86 325.1 740 37.2
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 5.1e-86 323.2 722 36.6
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.1e-85 322.0 912 31.4
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.9e-85 321.2 726 36.2
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.9e-85 321.2 726 36.2
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 2.5e-85 320.9 741 36.2
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 4.3e-85 320.1 751 37.3
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 5.6e-85 319.7 769 35.4
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.3e-85 319.3 745 35.2
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 6.2e-84 316.2 744 35.9
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 9.0e-83 312.4 752 35.0
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.0e-82 311.2 851 32.9
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 6.4e-81 306.2 721 37.6
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.1e-79 301.2 763 34.2
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.9e-78 297.0 755 33.5
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 8.7e-78 295.8 735 35.9
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 1.4e-75 288.5 842 32.3
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 3.1e-75 287.3 739 33.3
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.1e-75 287.3 762 34.9
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.3e-75 286.6 771 34.0
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 9.0e-75 285.8 860 32.6
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 7.6e-74 282.7 867 31.0
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 4.9e-73 280.0 767 34.4
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 1.1e-72 278.9 870 30.5
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 4.2e-72 276.9 754 33.0
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.1e-69 268.9 719 34.1
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.8e-67 261.5 714 32.5
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 3.1e-67 260.8 401 44.1
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 2.0e-66 258.1 724 31.6
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 6.5e-65 253.1 756 31.1
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 8.4e-65 252.7 733 32.7
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 3.2e-64 250.8 771 32.3
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.2e-63 248.8 736 31.5
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 4.6e-63 246.9 727 32.2
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.0e-63 246.5 463 36.3
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 7.9e-63 246.1 712 32.3
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.0e-62 245.7 760 31.1
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.5e-61 241.9 771 30.9
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.3e-61 240.4 760 30.8
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.2e-60 238.0 678 33.5
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.8e-60 237.7 680 33.2
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.7e-60 237.3 771 31.0
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 3.7e-60 237.3 797 31.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.1e-59 235.7 737 33.4
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.4e-59 234.6 801 31.1
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 5.3e-59 233.4 670 31.5
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.5e-58 231.9 680 32.6
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.5e-58 231.9 691 33.3
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.0e-58 231.5 555 34.2
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 5.9e-58 229.9 720 30.8
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 2.9e-57 227.6 772 31.6
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 3.8e-57 227.3 772 31.0
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 3.8e-57 227.3 710 29.3
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 5.0e-57 226.9 774 31.4
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 5.0e-57 226.9 683 33.7
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.9e-56 224.9 956 27.4
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 5.5e-56 223.4 716 29.3
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 6.1e-55 219.9 745 29.8
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 7.9e-55 219.5 775 30.7
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.4e-54 218.8 722 29.2
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 2.3e-54 218.0 804 31.1
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 3.0e-54 217.6 763 30.9
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.5e-53 215.3 769 30.0
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.5e-53 215.3 689 31.9
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.9e-53 214.9 773 28.8
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 6.3e-52 209.9 771 30.2
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.4e-51 208.8 731 29.7
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 9.1e-51 206.1 800 28.5
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.7e-49 201.8 794 29.0
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 8.5e-49 199.5 722 30.2
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.4e-48 198.7 858 27.7
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.5e-48 198.0 401 35.4
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 3.2e-48 197.6 775 29.4
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.7e-47 194.5 700 31.7
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.1e-47 193.4 363 37.5
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 6.1e-47 193.4 550 32.5
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.0e-46 192.6 730 28.6
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.3e-46 191.4 624 30.0
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 3.0e-46 191.0 759 28.9
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 5.7e-45 186.8 747 27.0
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 4.5e-42 177.2 765 30.1
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 5.0e-41 173.7 768 27.1
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 6.5e-41 173.3 446 33.4
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.9e-40 171.8 662 28.7
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 3.3e-37 161.0 943 24.7
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.3e-36 159.1 822 26.6
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 4.8e-36 157.1 975 24.3
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 3.1e-35 154.5 168 53.6
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 7.0e-35 153.3 656 26.7
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 2.6e-34 151.4 728 27.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 3.5e-34 151.0 783 25.8
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 3.2e-32 144.4 693 27.3
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.2e-31 142.5 713 25.0
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.1e-31 141.7 163 52.1
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 3.0e-30 137.9 760 26.4
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.2e-29 136.0 629 27.5
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 3.2e-24 117.9 523 31.9
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 4.2e-24 117.5 402 31.8
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.5e-24 117.1 192 42.2
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 3.4e-21 107.8 806 25.3
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 3.7e-20 104.4 157 41.4
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.2e-18 99.4 104 52.9
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 5.9e-18 97.1 215 35.3
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 2.9e-17 94.7 103 49.5
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 2.9e-17 94.7 146 41.8
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 6.6e-17 93.6 144 38.9
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 7.2e-16 90.1 759 23.1
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.6e-15 89.0 656 26.1
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 3.6e-15 87.8 364 30.2
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 4.7e-15 87.4 103 45.6
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.0e-14 86.3 114 46.5
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.8e-14 85.5 219 32.0
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 6.8e-14 83.6 664 25.3
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 5.7e-13 80.5 83 47.0
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.1e-11 76.3 128 39.8
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 7.0e-11 73.6 84 42.9
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 3.5e-10 71.2 109 43.1
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 1.0e-09 69.7 51 62.7


User provided reference genes

Program Settings