Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0395591 Lupinus albus HOM05D014786 ORTHO05D016942 2.1e-115 419.1 218 100.0
Glyma.13G363600 Glycine max HOM05D014786 ORTHO05D016942 7.0e-18 95.1 94 51.1
VMungo1080G1077 Vigna mungo HOM05D014786 ORTHO05D016942 2.5e-15 86.7 133 40.6
Phvul.005G175200 Phaseolus vulgaris HOM05D014786 ORTHO05D016942 2.7e-14 83.2 105 43.8
Psat5g301040 Pisum sativum HOM05D014786 ORTHO05D016942 8.8e-13 78.2 102 35.3
Manes.11G052900 Manihot esculenta HOM05D001781 ORTHO05D001711 2.0e-12 77.0 79 43.0
TPR.G37276 Trifolium pratense HOM05D014786 ORTHO05D016942 9.7e-12 74.7 116 38.8
Medtr2g103290 Medicago truncatula HOM05D014786 ORTHO05D016942 4.8e-11 72.4 120 38.3
Potri.003G061600 Populus trichocarpa HOM05D001781 ORTHO05D001711 2.4e-10 70.1 68 44.1
GSVIVG01017255001 Vitis vinifera HOM05D001781 ORTHO05D001711 5.0e-08 62.4 108 31.5
Sabra03G0035700 Salix brachista HOM05D001781 ORTHO05D001711 6.5e-08 62.0 114 32.5
Sc18g0000720 Simmondsia chinensis HOM05D001781 ORTHO05D001711 6.5e-08 62.0 121 33.1
RcHm_v2.0_Chr2g0136531 Rosa chinensis HOM05D025868 ORTHO05D001711 1.9e-07 60.5 80 35.0
MD17G1204700 Malus domestica HOM05D001781 ORTHO05D001711 2.5e-07 60.1 133 27.8
PSO210G1936 Papaver somniferum HOM05D001781 ORTHO05D001711 2.5e-07 60.1 89 30.3
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 2.5e-07 60.1 124 34.7
Lj3g0018209 Lotus japonicus HOM05D014786 ORTHO05D016942 4.2e-07 59.3 152 36.2
MD17G1205200 Malus domestica HOM05D001781 ORTHO05D001711 5.5e-07 58.9 138 29.0
QL02p087754 Quercus lobata HOM05D001781 ORTHO05D001711 5.5e-07 58.9 108 30.6
FvH4_6g30290 Fragaria vesca HOM05D025868 ORTHO05D001711 7.2e-07 58.5 80 36.2
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 7.2e-07 58.5 113 30.1
SalBow1G3291 Salvia bowleyana HOM05D001781 ORTHO05D001711 7.2e-07 58.5 112 26.8
Haze_25615 Corylus avellana HOM05D001781 ORTHO05D001711 9.4e-07 58.2 107 29.9
FAN05G2755 Fragaria x ananassa HOM05D025868 ORTHO05D001711 9.4e-07 58.2 80 36.2
Medtr3g050390 Medicago truncatula HOM05D001781 ORTHO05D001711 9.4e-07 58.2 111 28.8
Cpa.g.c41482 Carica papaya HOM05D001781 ORTHO05D001711 1.6e-06 57.4 109 31.2
Cpa.g.sc75.57 Carica papaya HOM05D001781 ORTHO05D001711 1.6e-06 57.4 118 29.7
MBI06_g09277_MAGBIO Magnolia biondii HOM05D001781 ORTHO05D001711 1.6e-06 57.4 107 30.8
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 1.6e-06 57.4 114 29.8
Oeu006941.1 Olea europaea HOM05D001781 ORTHO05D001711 1.6e-06 57.4 83 32.5
Cfa003345 Carpinus fangiana HOM05D001781 ORTHO05D001711 2.1e-06 57.0 107 29.0
Lsat_1_v5_gn_8_57420 Lactuca sativa HOM05D001781 ORTHO05D001711 2.1e-06 57.0 130 27.7
Oeu003481.1 Olea europaea HOM05D001781 ORTHO05D001711 2.1e-06 57.0 118 32.2
Oeu006925.1 Olea europaea HOM05D001781 ORTHO05D001711 2.1e-06 57.0 83 32.5
CAN.G309.58 Capsicum annuum HOM05D001781 ORTHO05D001711 2.7e-06 56.6 83 31.3
Actinidia22004 Actinidia chinensis HOM05D001781 ORTHO05D001711 3.6e-06 56.2 122 27.0
Solyc11g070070.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 3.6e-06 56.2 83 31.3
Sopen11g028750 Solanum pennellii HOM05D001781 ORTHO05D001711 3.6e-06 56.2 83 31.3
PGSC0003DMG400025515 Solanum tuberosum HOM05D001781 ORTHO05D001711 3.6e-06 56.2 83 31.3
Actinidia40455 Actinidia chinensis HOM05D001781 ORTHO05D001711 4.7e-06 55.8 118 28.8
CDE06G2319 Ceratophyllum demersum HOM05D001781 ORTHO05D001711 4.7e-06 55.8 97 32.0
CDE12G0912 Ceratophyllum demersum HOM05D001781 ORTHO05D001711 4.7e-06 55.8 97 32.0
PSO455G0032 Papaver somniferum HOM05D001781 ORTHO05D001711 4.7e-06 55.8 85 30.6
Prupe.3G080200 Prunus persica HOM05D001781 ORTHO05D001711 4.7e-06 55.8 92 29.3
Sc08g0006760 Simmondsia chinensis HOM05D001781 ORTHO05D001711 4.7e-06 55.8 123 30.9
ClCG11G002860 Citrullus lanatus HOM05D001781 ORTHO05D001711 6.1e-06 55.5 85 28.2
MELO3C004524.2 Cucumis melo HOM05D001781 ORTHO05D001711 6.1e-06 55.5 85 28.2
Hma1.2p1_0018F.1_g012670 Hydrangea macrophylla HOM05D001781 ORTHO05D001711 6.1e-06 55.5 86 31.4
Lj4A461T9 Lonicera japonica HOM05D001781 ORTHO05D001711 6.1e-06 55.5 84 32.1
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 6.1e-06 55.5 87 31.0
Peaxi162Scf00591g00511 Petunia axillaris HOM05D001781 ORTHO05D001711 6.1e-06 55.5 85 30.6
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 6.1e-06 55.5 85 30.6
unitig_899.g15345 Utricularia gibba HOM05D005016 ORTHO05D005740 6.1e-06 55.5 85 32.9
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 8.0e-06 55.1 116 28.4
PSO170G3589 Papaver somniferum HOM05D001781 ORTHO05D001711 8.0e-06 55.1 85 29.4
Rhsim01G0076800 Rhododendron simsii HOM05D001781 ORTHO05D001711 8.0e-06 55.1 107 26.2
RcHm_v2.0_Chr2g0089141 Rosa chinensis HOM05D001781 ORTHO05D001711 8.0e-06 55.1 86 31.4


User provided reference genes

Program Settings