Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 1.2e-52 209.5 104 100.0
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 2.8e-49 198.4 104 93.3
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 6.4e-38 160.6 102 80.4
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 6.4e-38 160.6 101 79.2
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 8.4e-38 160.2 105 75.2
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 7.1e-37 157.1 102 79.4
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 2.3e-35 152.1 102 75.5
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 2.4e-32 142.1 104 72.1
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 1.2e-31 139.8 103 70.9
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 1.5e-31 139.4 100 68.0
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 2.6e-31 138.7 100 68.0
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 3.8e-30 134.8 101 66.3
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 3.8e-30 134.8 98 68.4
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 4.9e-30 134.4 111 64.9
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 6.5e-30 134.0 100 65.0
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 7.1e-29 130.6 99 65.7
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 3.0e-27 125.2 101 63.4
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 7.6e-23 110.5 78 69.2
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 3.9e-19 98.2 82 58.5
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 3.9e-19 98.2 86 57.0
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 7.4e-18 94.0 106 50.0
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 7.4e-18 94.0 108 52.8
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 7.4e-18 94.0 108 52.8
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 7.4e-18 94.0 108 52.8
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 2.2e-17 92.4 108 50.9
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 2.2e-17 92.4 107 51.4
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 3.7e-17 91.7 95 54.7
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 8.2e-17 90.5 108 50.9
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 1.1e-16 90.1 102 51.0
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 4.1e-16 88.2 95 50.5
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 6.9e-16 87.4 74 59.5
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 5.9e-15 84.3 100 49.0
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.9e-13 79.3 103 50.5
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 1.9e-13 79.3 87 49.4
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 5.5e-13 77.8 94 51.1
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 7.2e-13 77.4 106 43.4
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 9.4e-13 77.0 95 50.5
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 9.4e-13 77.0 99 45.5
Gohir.A08G200000 Gossypium hirsutum HOM05D007861 ORTHO05D007271 9.4e-13 77.0 104 42.3
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 9.4e-13 77.0 108 46.3
Gohir.D08G217100 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.6e-12 76.3 104 42.3
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 3.6e-12 75.1 89 51.7
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 3.6e-12 75.1 100 47.0
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 4.6e-12 74.7 105 48.6
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 6.1e-12 74.3 92 48.9
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 7.9e-12 73.9 99 44.4
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 7.9e-12 73.9 99 44.4
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 1.8e-11 72.8 105 44.8
Hma1.2p1_0569F.1_g180260 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 2.3e-11 72.4 69 50.7
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 3.9e-11 71.6 99 44.4
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 6.7e-11 70.9 108 43.5
Manes.04G015900 Manihot esculenta HOM05D007861 ORTHO05D007271 6.7e-11 70.9 86 51.2
DCAR_018786 Daucus carota HOM05D007861 ORTHO05D007271 8.8e-11 70.5 82 43.9
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.1e-10 70.1 109 43.1
BcaB06g28183 Brassica carinata HOM05D014739 ORTHO05D007271 3.3e-10 68.6 96 45.8
BraA04t17695Z Brassica rapa HOM05D014739 ORTHO05D007271 4.3e-10 68.2 96 45.8
Sp4g10850 Schrenkiella parvula HOM05D014739 ORTHO05D007271 4.3e-10 68.2 69 58.0
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 7.4e-10 67.4 63 55.6
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 9.7e-10 67.0 69 52.2
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 9.7e-10 67.0 86 53.5
C04p57110 Brassica napus HOM05D014739 ORTHO05D007271 1.3e-09 66.6 96 45.8
BcaC02g08213 Brassica carinata HOM05D014739 ORTHO05D007271 1.7e-09 66.2 96 45.8
A04p21280 Brassica napus HOM05D014739 ORTHO05D007271 1.7e-09 66.2 96 45.8
BolC4t27246H Brassica oleracea HOM05D014739 ORTHO05D007271 1.7e-09 66.2 96 45.8
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 2.2e-09 65.9 96 46.9
Carub.0004s0882 Capsella rubella HOM05D014739 ORTHO05D007271 3.7e-09 65.1 84 46.4
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 6.3e-09 64.3 88 47.7
Thhalv10017662m.g Eutrema salsugineum HOM05D014739 ORTHO05D007271 2.4e-08 62.4 84 44.0
Hma1.2p1_0344F.1_g131140 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 3.1e-08 62.0 54 53.7
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 5.3e-08 61.2 47 61.7
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 6.9e-08 60.8 109 39.4
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 9.1e-08 60.5 103 38.8
Migut.N02575 Erythranthe guttata HOM05D007861 ORTHO05D007271 1.2e-07 60.1 104 38.5
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 2.6e-07 58.9 63 49.2
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 5.9e-07 57.8 106 42.5
CARHR120770 Cardamine hirsuta HOM05D014739 ORTHO05D007271 1.3e-06 56.6 90 41.1
Eucgr.J00896 Eucalyptus grandis HOM05D007861 ORTHO05D007271 2.2e-06 55.8 82 40.2
Sopen06g031390 Solanum pennellii HOM05D039995 ORTHO05D007271 2.2e-06 55.8 66 48.5
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 3.8e-06 55.1 107 39.3


User provided reference genes

Program Settings