Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 1.5e-86 322.8 160 100.0
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 1.9e-41 172.9 156 62.8
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 3.3e-41 172.2 156 58.3
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 3.3e-41 172.2 157 59.9
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 7.3e-41 171.0 156 59.0
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.1e-40 169.5 157 59.9
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.8e-40 169.1 141 62.4
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.8e-40 169.1 130 69.2
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 3.6e-40 168.7 156 62.2
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 4.7e-40 168.3 130 68.5
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 4.7e-40 168.3 130 68.5
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 4.7e-40 168.3 130 67.7
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 6.2e-40 167.9 131 67.2
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.2e-38 163.7 133 61.7
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 7.6e-38 161.0 134 58.2
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 2.2e-37 159.5 142 58.5
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 2.9e-37 159.1 142 59.2
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 6.4e-37 157.9 147 57.1
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 1.4e-36 156.8 145 57.2
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 4.2e-36 155.2 145 56.6
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 5.4e-36 154.8 147 57.8
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 5.4e-36 154.8 147 57.8
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 5.4e-36 154.8 151 55.0
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 1.6e-35 153.3 163 55.2
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 1.6e-35 153.3 135 62.2
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 2.1e-35 152.9 130 60.0
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.7e-35 152.5 148 58.1
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 4.6e-35 151.8 140 55.0
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 7.8e-35 151.0 137 54.0
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 7.8e-35 151.0 152 53.9
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 7.8e-35 151.0 146 54.8
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 7.8e-35 151.0 146 54.8
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.0e-34 150.6 144 56.2
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.7e-34 149.8 150 53.3
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 2.3e-34 149.4 130 60.0
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 2.3e-34 149.4 130 58.5
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 3.0e-34 149.1 134 59.7
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 3.9e-34 148.7 153 52.3
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 3.9e-34 148.7 158 53.8
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 5.1e-34 148.3 134 55.2
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 5.1e-34 148.3 159 50.3
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 5.1e-34 148.3 150 54.7
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 6.6e-34 147.9 158 53.2
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 8.7e-34 147.5 151 53.6
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 1.1e-33 147.1 148 57.4
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 1.5e-33 146.7 133 52.6
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.5e-33 146.7 158 49.4
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.5e-33 146.7 133 54.9
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.5e-33 146.7 150 54.0
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 2.5e-33 146.0 138 54.3
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.5e-33 146.0 136 58.1
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 3.3e-33 145.6 150 56.0
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 7.3e-33 144.4 155 51.6
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 1.3e-32 143.7 152 49.3
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 2.1e-32 142.9 130 58.5
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 2.1e-32 142.9 128 60.2
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 2.1e-32 142.9 135 57.0
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 2.8e-32 142.5 132 58.3
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 6.2e-32 141.4 134 50.7
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 6.2e-32 141.4 140 55.0
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 8.1e-32 141.0 148 52.0
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 8.1e-32 141.0 154 50.0
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 1.1e-31 140.6 153 51.6
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.8e-31 139.8 154 49.4
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.8e-31 139.8 139 51.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.8e-31 139.8 139 51.8
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 4.0e-31 138.7 141 51.8
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 9.0e-31 137.5 153 47.7
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 1.5e-30 136.7 137 53.3
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.5e-30 136.7 140 54.3
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 2.6e-30 136.0 130 56.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 3.4e-30 135.6 146 53.4
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 9.9e-30 134.0 140 52.9
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.2e-29 132.9 133 53.4
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 3.8e-29 132.1 135 53.3
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 7.9e-27 124.4 137 51.1
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 1.8e-26 123.2 150 50.7
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 3.9e-26 122.1 132 47.7
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 6.7e-26 121.3 132 49.2
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 9.6e-25 117.5 143 48.3
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.2e-22 110.5 144 44.4
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 1.2e-22 110.5 130 44.6
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 7.6e-22 107.8 150 42.7
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.4e-20 103.6 116 50.9
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 3.4e-14 82.4 140 36.4
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 4.2e-12 75.5 133 32.3
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 3.0e-10 69.3 80 47.5


User provided reference genes

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