Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 0.0e+00 2244.5 1142 100.0
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 0.0e+00 1658.7 1122 76.4
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1618.6 1128 75.1
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1615.9 1120 74.7
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 0.0e+00 1604.3 1125 74.4
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 0.0e+00 1598.6 1121 73.7
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 0.0e+00 1581.6 1119 73.9
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1565.1 1121 73.0
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1536.2 1119 70.8
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1507.3 1119 69.7
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1484.5 1138 68.2
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1451.4 1123 67.8
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 0.0e+00 1233.8 1126 58.3
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1208.4 1124 57.8
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1194.1 1124 57.2
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 0.0e+00 1180.6 1222 52.8
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 0.0e+00 1176.8 1129 55.4
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1172.5 1124 56.8
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 0.0e+00 1172.1 1124 56.8
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 0.0e+00 1171.4 1128 56.1
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1151.3 982 64.4
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1150.2 1124 56.0
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1133.6 1123 54.6
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 0.0e+00 1130.9 1151 53.3
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 0.0e+00 1128.2 1123 53.9
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 0.0e+00 1124.0 1029 56.8
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 0.0e+00 1120.9 1125 52.9
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 0.0e+00 1116.3 1132 53.2
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 0.0e+00 1113.2 1163 53.0
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 0.0e+00 1106.3 1134 52.8
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 0.0e+00 1092.0 1137 52.2
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 0.0e+00 1083.2 1123 51.8
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 0.0e+00 1082.0 1130 52.7
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 0.0e+00 1075.5 1124 52.2
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.2e-305 1053.5 993 57.2
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 3.7e-304 1048.5 1151 50.4
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 6.1e-299 1031.2 1134 49.8
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 5.2e-298 1028.1 1146 49.2
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 3.4e-297 1025.4 1118 51.2
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 4.4e-297 1025.0 1146 49.3
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 6.3e-296 1021.1 1146 49.1
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 8.3e-296 1020.8 1045 52.8
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 2.4e-295 1019.2 1118 51.2
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 4.1e-295 1018.5 1119 49.5
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 1.6e-294 1016.5 1161 50.0
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 1.6e-291 1006.5 1126 50.3
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 1.6e-291 1006.5 1127 49.6
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 5.7e-289 998.0 1123 49.3
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 3.7e-288 995.3 1121 49.2
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.7e-285 986.5 1129 48.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 3.9e-285 985.3 1119 47.7
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.1e-284 983.8 1119 47.6
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.2e-280 969.5 1130 46.7
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 6.4e-280 968.0 1143 46.5
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 9.2e-279 964.1 1129 47.4
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 1.5e-276 956.8 1123 46.7
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 4.3e-276 955.3 1128 46.9
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 5.6e-276 954.9 1151 47.9
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 7.3e-276 954.5 1127 46.3
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 2.8e-275 952.6 1119 46.7
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 4.0e-274 948.7 1130 46.7
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 4.0e-274 948.7 1130 47.1
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 2.6e-273 946.0 1147 46.4
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 1.4e-271 940.3 1139 45.1
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 1.4e-271 940.3 1150 46.0
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 1.9e-271 939.9 1124 45.8
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 6.0e-270 934.9 1139 44.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 6.0e-270 934.9 1139 44.8
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 3.9e-269 932.2 1140 44.9
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 6.6e-269 931.4 1123 46.0
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 3.1e-266 922.5 1131 45.2
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.1e-259 899.8 1131 43.3
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.8e-258 896.7 1152 44.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 2.1e-254 883.2 972 50.1
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 3.3e-252 875.9 874 53.8
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.6e-251 872.5 1128 44.0
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 6.2e-251 871.7 1150 43.7
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 4.9e-248 862.1 1128 43.5
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.4e-247 860.5 1127 42.9
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.1e-246 856.7 1116 43.8
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 1.3e-245 854.0 1125 43.3
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 6.7e-245 851.7 1132 43.8
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.9e-244 850.1 1090 44.2
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 1.3e-232 810.8 735 58.2
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 8.7e-229 798.1 765 55.3
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.9e-228 797.0 1061 44.6
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 5.3e-226 788.9 1103 41.1
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 4.2e-223 779.2 1116 41.7
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 3.7e-219 766.1 1129 40.7
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 1.7e-211 740.7 1123 39.5
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 2.6e-209 733.4 554 70.8
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.4e-202 711.1 1015 40.1
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 3.0e-197 693.3 801 47.3
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.8e-195 686.8 826 47.5
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 3.4e-188 663.3 775 48.1
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 5.6e-175 619.4 1172 35.3
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 6.2e-150 536.2 728 43.5
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.2e-137 495.4 657 42.5
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.7e-137 494.2 864 36.3
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 7.1e-130 469.5 401 64.8
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 7.9e-121 439.5 556 44.8
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.4e-117 428.7 486 48.4
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.2e-115 421.4 313 71.9
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 8.8e-88 329.7 302 58.6
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 5.9e-84 317.0 361 45.2
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 2.7e-81 308.1 313 54.3
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 1.8e-80 305.4 617 35.0
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 1.8e-72 278.9 1122 25.3
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 4.8e-70 270.8 382 42.7
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 2.3e-67 261.9 190 70.0
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.5e-66 259.2 381 38.3
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 2.5e-66 258.5 1096 23.2
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 1.3e-62 246.1 230 57.8
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.2e-55 223.0 303 40.3
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 7.3e-50 203.8 291 38.8
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 8.6e-35 153.7 157 54.8
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 5.8e-31 141.0 137 48.2
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 2.5e-26 125.6 79 75.9
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 4.3e-26 124.8 116 57.8
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.6e-23 115.5 127 52.8
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 1.6e-20 106.3 207 28.5
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 4.3e-18 98.2 479 23.0
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 2.2e-14 85.9 121 38.8
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 4.9e-14 84.7 126 37.3
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 8.4e-14 84.0 64 64.1
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.0e-11 77.0 65 58.5
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 3.1e-08 65.5 55 60.0


User provided reference genes

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