Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 4.9e-83 311.2 173 100.0
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 6.1e-33 144.8 185 55.7
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 7.9e-33 144.4 185 56.2
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 2.5e-26 122.9 144 50.7
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 3.2e-26 122.5 173 49.7
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-25 120.6 183 49.2
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.6e-25 120.2 186 49.5
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.6e-25 120.2 145 54.5
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.1e-25 119.8 167 50.3
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.1e-25 119.8 176 51.7
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 2.1e-25 119.8 130 53.8
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 2.7e-25 119.4 182 50.0
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 4.7e-25 118.6 188 50.5
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 6.1e-25 118.2 101 65.3
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 8.0e-25 117.9 111 59.5
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.0e-24 117.5 129 54.3
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.0e-24 117.5 167 46.1
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 1.0e-24 117.5 133 50.4
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.8e-24 116.7 167 48.5
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.8e-24 116.7 123 54.5
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 2.3e-24 116.3 136 50.7
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.0e-24 115.9 110 59.1
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 5.2e-24 115.2 176 46.0
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 8.8e-24 114.4 172 41.9
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 8.8e-24 114.4 180 47.8
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.1e-23 114.0 145 46.2
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.1e-23 114.0 145 46.2
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.1e-23 114.0 145 46.2
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.5e-23 113.6 187 49.2
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 2.0e-23 113.2 173 45.7
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 3.3e-23 112.5 173 45.1
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 3.3e-23 112.5 123 55.3
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 4.4e-23 112.1 172 43.0
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 4.4e-23 112.1 177 44.1
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.4e-23 112.1 177 44.1
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 5.7e-23 111.7 142 47.2
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.5e-23 111.3 167 41.3
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 7.5e-23 111.3 184 45.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 9.7e-23 110.9 172 41.9
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 9.7e-23 110.9 162 43.8
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.7e-22 110.2 168 48.2
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 3.7e-22 109.0 136 47.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.7e-22 109.0 180 46.1
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 6.3e-22 108.2 162 42.0
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 2.4e-21 106.3 158 46.8
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 3.1e-21 105.9 172 45.9
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 4.1e-21 105.5 193 46.1
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 5.3e-21 105.1 97 59.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 7.0e-21 104.8 114 58.8
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 9.1e-21 104.4 173 49.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 2.0e-20 103.2 154 48.1
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.6e-20 102.8 158 41.8
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.5e-20 102.4 187 42.2
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 4.5e-20 102.1 154 46.1
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 4.5e-20 102.1 93 60.2
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 4.5e-20 102.1 185 48.6
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.0e-19 100.9 142 49.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.3e-19 100.5 170 42.9
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.7e-19 100.1 92 54.3
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 3.8e-19 99.0 103 57.3
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 3.8e-19 99.0 175 47.4
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 6.5e-19 98.2 184 46.2
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.1e-18 97.4 142 49.3
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.5e-18 97.1 152 42.1
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.9e-18 96.7 134 47.8
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.9e-18 96.7 81 61.7
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.9e-18 96.7 138 44.9
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.5e-18 96.3 123 44.7
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.5e-18 96.3 109 52.3
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 3.2e-18 95.9 174 42.5
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 4.2e-18 95.5 108 49.1
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.5e-18 95.1 122 45.9
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 9.4e-18 94.4 160 39.4
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 9.4e-18 94.4 81 60.5
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 9.4e-18 94.4 124 47.6
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 9.4e-18 94.4 156 42.3
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 9.4e-18 94.4 175 38.9
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.6e-17 93.6 157 40.8
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.6e-17 93.6 157 40.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.6e-17 93.6 96 53.1
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.6e-17 93.6 93 59.1
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 2.1e-17 93.2 134 44.0
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 2.7e-17 92.8 134 43.3
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 2.7e-17 92.8 119 44.5
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 3.6e-17 92.4 171 45.0
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 4.7e-17 92.0 106 48.1
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 6.8e-16 88.2 97 54.6
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.8e-16 88.2 167 43.1
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 8.8e-16 87.8 128 46.9
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.2e-15 87.4 120 52.5
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.3e-14 84.0 70 61.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 3.7e-14 82.4 139 41.0
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.7e-14 82.4 104 43.3
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 1.1e-13 80.9 95 46.3
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.8e-13 80.1 71 56.3
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.1e-13 79.3 136 41.9
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 5.9e-12 75.1 74 58.1
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.7e-11 73.6 117 46.2
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 2.9e-11 72.8 138 37.7
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 2.7e-09 66.2 101 43.6
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 5.2e-08 62.0 68 51.5
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 2.6e-07 59.7 60 55.0
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 2.6e-07 59.7 60 55.0
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 2.6e-07 59.7 60 55.0
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 4.4e-07 58.9 97 46.4


User provided reference genes

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