Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 9.7e-186 653.3 320 100.0
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.9e-165 585.9 318 89.6
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 4.0e-163 578.2 317 88.3
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.2e-162 576.6 317 88.3
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.2e-162 576.6 318 87.7
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.9e-153 545.4 318 83.3
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.6e-151 539.7 317 84.5
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.3e-150 536.6 328 80.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 5.2e-147 524.6 315 81.6
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.9e-147 523.9 288 88.2
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 8.9e-147 523.9 317 79.5
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.2e-146 523.5 312 80.8
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 2.6e-146 522.3 312 79.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 4.9e-145 518.1 312 79.2
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.4e-144 516.5 312 78.5
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.4e-144 515.8 314 79.9
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 5.4e-144 514.6 284 88.0
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.2e-143 513.5 312 78.2
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 4.6e-143 511.5 316 79.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.0e-142 510.4 317 78.5
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.3e-142 510.0 319 78.4
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-142 510.0 319 78.4
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.3e-142 510.0 319 78.4
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.3e-142 509.2 323 77.7
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 3.0e-142 508.8 317 77.0
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 6.6e-142 507.7 308 80.8
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 8.6e-142 507.3 312 78.2
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 8.6e-142 507.3 317 76.7
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.5e-141 506.5 319 77.7
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.5e-141 506.5 312 78.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.9e-141 506.1 319 78.1
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 4.3e-141 505.0 319 76.8
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.4e-139 500.0 317 77.0
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.5e-138 496.5 292 80.1
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 4.4e-138 495.0 322 77.3
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.7e-137 493.0 310 76.1
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.9e-137 492.3 315 77.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 3.8e-137 491.9 315 77.1
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 4.9e-137 491.5 320 75.9
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.1e-136 490.3 313 76.4
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 5.4e-136 488.0 315 76.2
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 9.2e-136 487.3 312 77.6
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.6e-135 486.5 321 75.7
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 4.6e-135 485.0 313 76.0
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 6.0e-135 484.6 322 75.8
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 6.0e-135 484.6 317 75.7
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 6.6e-134 481.1 316 75.6
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.3e-133 478.4 319 74.6
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 9.6e-133 477.2 317 74.8
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-132 476.5 317 74.8
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.6e-132 476.5 317 74.8
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 2.1e-132 476.1 335 73.4
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 6.2e-132 474.6 318 74.5
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 6.2e-132 474.6 318 74.5
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 6.2e-132 474.6 320 74.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 4.0e-131 471.9 312 75.3
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 5.2e-131 471.5 320 73.4
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 8.9e-131 470.7 325 72.9
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 8.9e-131 470.7 285 83.2
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.4e-130 468.8 312 73.7
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 4.4e-130 468.4 321 74.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 4.4e-130 468.4 321 74.1
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 3.8e-129 465.3 286 80.4
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 4.9e-129 464.9 325 72.3
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 6.4e-129 464.5 322 73.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.9e-128 463.0 330 71.5
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.2e-127 460.3 325 72.6
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.8e-124 449.1 260 85.0
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 8.1e-124 447.6 320 71.6
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 4.0e-123 445.3 313 72.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 4.5e-122 441.8 312 72.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.1e-120 437.2 312 70.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.4e-120 434.9 388 60.6
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.7e-119 432.6 423 57.2
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.4e-115 420.2 270 77.8
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.4e-115 419.5 252 77.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 3.1e-115 419.1 259 78.4
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 9.0e-115 417.5 292 70.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.0e-114 416.4 321 68.5
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.1e-112 410.6 282 72.0
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.6e-111 406.8 321 67.0
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.1e-111 406.4 272 73.5
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 7.9e-111 404.4 251 77.7
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.0e-110 404.1 263 74.9
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.1e-109 400.6 345 62.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.4e-107 392.9 295 71.9
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.4e-106 389.0 313 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.5e-103 379.0 302 61.6
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.0e-102 377.5 302 60.3
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 2.4e-99 366.3 317 62.1
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.1e-99 365.9 246 73.6
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 5.3e-99 365.2 312 62.2
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.5e-96 356.3 294 58.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 9.3e-96 354.4 641 37.9
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.5e-93 347.1 285 58.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 2.4e-91 339.7 262 63.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 3.1e-91 339.3 288 65.6
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 2.0e-90 336.7 334 58.1
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.7e-87 326.2 263 66.2
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.3e-85 319.3 307 56.7
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 7.4e-85 318.2 208 75.0
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.7e-76 290.4 239 66.1
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 3.5e-74 282.7 161 83.2
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 5.9e-74 282.0 188 68.1
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 7.2e-72 275.0 187 72.7
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.7e-66 256.5 216 56.9
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 3.8e-65 252.7 163 77.3
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-62 244.2 187 67.9
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 7.0e-59 231.9 243 55.6
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.0e-53 213.8 317 44.2
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.4e-53 212.6 150 69.3
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.1e-51 208.0 131 77.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 7.8e-50 201.8 145 66.9
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-47 194.5 174 55.7
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 9.8e-45 184.9 101 84.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 4.1e-35 152.9 90 81.1
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 6.2e-31 139.0 276 35.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.8e-30 135.6 92 68.5
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 4.1e-27 126.3 281 29.9
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 4.3e-24 116.3 80 71.2
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 8.7e-17 92.0 159 40.3
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 2.1e-15 87.4 362 24.0
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.3e-09 68.2 53 56.6
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 5.1e-09 66.2 48 64.6
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 5.1e-09 66.2 49 67.3
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-08 64.7 50 70.0


User provided reference genes

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