Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 8.6e-262 906.4 433 100.0
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 8.3e-180 634.0 414 75.1
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 2.4e-179 632.5 426 74.9
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 4.0e-174 615.1 428 72.2
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 5.4e-171 604.7 449 68.2
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 3.3e-168 595.5 413 72.9
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 4.3e-168 595.1 440 69.8
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 1.2e-167 593.6 407 72.2
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 2.9e-164 582.4 436 69.5
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 2.5e-152 542.7 449 64.6
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.1e-142 510.8 413 62.7
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 3.4e-141 505.8 414 63.3
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 5.8e-141 505.0 408 62.3
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 8.4e-140 501.1 412 62.1
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 1.4e-139 500.4 407 63.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 1.4e-139 500.4 406 63.1
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 8.7e-137 491.1 417 60.9
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 3.3e-136 489.2 406 61.3
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 3.6e-135 485.7 431 57.8
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 2.4e-134 483.0 406 61.3
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 2.0e-133 479.9 405 61.2
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 5.8e-133 478.4 425 57.4
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.2e-132 476.5 405 59.5
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.1e-131 474.2 413 61.3
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.4e-131 473.8 425 56.9
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 4.6e-130 468.8 407 60.0
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.0e-129 467.6 406 59.4
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 8.7e-129 464.5 410 59.0
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.5e-128 463.8 409 60.1
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 7.3e-128 461.5 521 49.5
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.8e-126 456.8 419 57.8
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 9.0e-126 454.5 405 58.0
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.6e-125 453.0 425 56.2
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 9.9e-125 451.1 427 56.9
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 1.7e-124 450.3 406 59.6
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 3.8e-124 449.1 403 57.8
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.1e-123 447.6 410 58.0
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 2.4e-123 446.4 404 55.4
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.4e-123 446.4 406 58.6
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 2.4e-123 446.4 423 57.7
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 3.2e-123 446.0 405 57.0
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 3.2e-123 446.0 409 57.9
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 4.6e-122 442.2 404 56.4
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 2.3e-121 439.9 311 71.4
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 6.7e-121 438.3 409 56.7
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 1.9e-120 436.8 404 57.9
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 2.1e-119 433.3 407 57.7
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 4.8e-119 432.2 418 55.0
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.4e-118 430.6 417 55.9
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 6.9e-118 428.3 405 55.1
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.6e-117 426.4 403 56.1
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 2.6e-117 426.4 420 54.8
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.5e-117 425.6 412 54.9
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 5.8e-117 425.2 418 53.6
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 5.8e-117 425.2 407 57.5
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 2.9e-116 422.9 423 54.1
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 3.8e-116 422.5 420 53.3
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 8.4e-116 421.4 347 60.5
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.1e-115 421.0 413 55.4
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.4e-115 420.6 407 56.3
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 4.2e-115 419.1 424 52.8
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 5.5e-115 418.7 416 53.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.5e-115 418.7 418 52.6
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 2.7e-114 416.4 416 53.8
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 2.7e-114 416.4 404 54.5
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 3.5e-114 416.0 419 53.7
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 6.0e-114 415.2 409 54.0
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 7.9e-114 414.8 417 55.2
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 1.0e-113 414.5 413 54.0
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.8e-113 413.7 410 54.4
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 5.1e-113 412.1 413 54.5
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.3e-111 407.5 410 55.4
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 3.7e-111 406.0 409 53.5
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.8e-111 405.6 383 57.4
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 6.2e-111 405.2 404 55.7
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 8.2e-111 404.8 404 55.0
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.5e-109 400.6 348 61.2
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 1.5e-109 400.6 404 55.4
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 1.7e-108 397.1 413 51.8
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.9e-108 396.4 404 54.5
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 3.8e-108 396.0 408 53.7
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 7.1e-107 391.7 417 53.2
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 2.2e-103 380.2 414 51.4
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.5e-101 372.5 366 55.2
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 1.4e-99 367.5 325 59.7
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 4.2e-99 365.9 416 49.8
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 4.6e-98 362.5 341 55.7
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 1.5e-96 357.5 414 49.8
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.0e-96 357.1 414 50.2
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.3e-96 355.9 402 51.5
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 2.2e-95 353.6 346 55.8
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 2.4e-94 350.1 422 45.7
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 3.1e-94 349.7 329 59.3
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.8e-89 331.6 497 41.6
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.0e-88 330.5 377 47.5
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 2.8e-87 326.6 358 52.0
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 6.5e-84 315.5 315 53.3
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 2.1e-82 310.5 315 53.3
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.4e-78 297.7 380 46.1
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 5.3e-78 295.8 308 50.3
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.0e-76 291.6 430 43.7
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.3e-76 291.2 360 47.8
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.5e-75 287.0 293 53.2
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 1.5e-72 277.7 324 48.8
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 2.0e-64 250.8 238 55.9
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 3.8e-60 236.5 358 41.6
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 6.3e-55 219.2 170 64.7
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 1.4e-54 218.0 266 46.6
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 1.4e-54 218.0 277 45.1
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 7.8e-53 212.2 266 47.4
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.7e-52 211.1 408 34.3
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.9e-51 207.6 432 34.7
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 7.3e-51 205.7 397 34.5
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 3.1e-49 200.3 468 31.8
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 4.0e-49 199.9 280 41.4
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.9e-43 181.0 250 45.6
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 7.8e-37 159.1 126 66.7
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 4.3e-35 153.3 100 75.0
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 9.5e-35 152.1 83 85.5
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.1e-34 149.1 70 92.9
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 4.0e-33 146.7 381 29.4
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.5e-32 144.8 83 80.7
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.9e-30 137.9 89 75.3
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.0e-28 130.6 245 38.0
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 5.2e-25 119.8 166 44.6
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 2.0e-24 117.9 579 23.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 7.6e-24 115.9 220 38.6
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 9.3e-22 109.0 194 40.7
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 2.1e-21 107.8 165 38.8
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.0e-20 105.5 71 73.2
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 9.6e-19 99.0 169 41.4
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 1.3e-18 98.6 115 50.4
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 8.1e-18 95.9 445 24.5
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.7e-15 88.2 115 44.3
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 6.0e-13 79.7 148 34.5
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 3.9e-12 77.0 98 42.9
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.9e-07 60.1 66 50.0


User provided reference genes

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