Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 3.7e-51 204.5 100 100.0
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.5e-20 102.8 114 57.9
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 2.0e-20 102.4 111 58.6
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 2.6e-20 102.1 120 53.3
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 7.6e-20 100.5 105 57.1
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.3e-19 99.8 107 57.0
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 3.2e-18 95.1 120 51.7
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 3.2e-18 95.1 103 56.3
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 3.2e-18 95.1 106 58.5
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 4.2e-18 94.7 107 52.3
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.6e-17 92.8 104 51.0
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.5e-17 91.7 103 50.5
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 6.0e-17 90.9 112 53.6
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 1.3e-16 89.7 108 52.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 2.3e-16 89.0 111 52.3
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 2.5e-15 85.5 107 54.2
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 1.1e-13 80.1 99 50.5
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 1.8e-13 79.3 116 45.7
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.4e-13 79.0 92 48.9
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.4e-13 79.0 116 45.7
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 4.0e-13 78.2 109 53.2
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 5.3e-13 77.8 104 46.2
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.9e-13 77.4 116 44.8
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 1.2e-12 76.6 102 50.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.2e-12 76.6 104 47.1
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.5e-12 76.3 99 48.5
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.5e-12 76.3 99 48.5
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 3.4e-12 75.1 117 46.2
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.5e-12 74.7 113 44.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 7.6e-12 73.9 101 47.5
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.0e-11 73.6 109 45.9
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 1.0e-11 73.6 109 50.5
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.0e-11 73.6 118 44.9
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.3e-11 73.2 112 45.5
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.3e-11 73.2 116 44.0
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 1.7e-11 72.8 115 47.8
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.7e-11 72.8 102 51.0
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.2e-11 72.4 123 45.5
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.9e-11 72.0 96 45.8
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.9e-11 72.0 96 45.8
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.8e-11 71.6 105 46.7
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 4.9e-11 71.2 105 48.6
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 6.5e-11 70.9 112 45.5
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 6.5e-11 70.9 110 42.7
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 6.5e-11 70.9 110 45.5
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 8.4e-11 70.5 88 45.5
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 1.1e-10 70.1 107 42.1
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 1.1e-10 70.1 91 45.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 1.1e-10 70.1 106 49.1
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 1.4e-10 69.7 111 45.0
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.4e-10 69.7 120 43.3
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.9e-10 69.3 101 46.5
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 1.9e-10 69.3 124 41.1
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.9e-10 69.3 82 48.8
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.5e-10 68.9 112 43.8
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 3.2e-10 68.6 97 43.3
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 4.2e-10 68.2 117 44.4
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 7.1e-10 67.4 96 44.8
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 7.1e-10 67.4 112 43.8
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 7.1e-10 67.4 83 48.2
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 9.3e-10 67.0 94 47.9
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 9.3e-10 67.0 92 46.7
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-09 66.6 104 46.2
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.2e-09 66.6 88 48.9
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.6e-09 66.2 108 42.6
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.7e-09 65.5 95 49.5
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 2.7e-09 65.5 93 41.9
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 6.0e-09 64.3 92 48.9
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 6.0e-09 64.3 103 45.6
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 6.0e-09 64.3 108 40.7
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 7.9e-09 63.9 96 43.8
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 7.9e-09 63.9 87 44.8
Lj3g0008615 Lotus japonicus HOM05D007398 ORTHO05D004912 1.3e-08 63.2 105 44.8
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.8e-08 62.8 112 42.0
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 3.9e-08 61.6 88 46.6
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 3.9e-08 61.6 106 42.5
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 3.9e-08 61.6 78 50.0
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 6.7e-08 60.8 108 40.7
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 1.1e-07 60.1 121 35.5
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 1.1e-07 60.1 97 37.1
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 1.5e-07 59.7 90 41.1
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 1.9e-07 59.3 80 46.2
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 3.3e-07 58.5 85 48.2
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 3.3e-07 58.5 102 40.2
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 4.3e-07 58.2 79 43.0
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 5.7e-07 57.8 93 39.8
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 7.4e-07 57.4 80 46.2
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 7.4e-07 57.4 85 44.7
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 7.4e-07 57.4 78 50.0
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 9.6e-07 57.0 89 38.2
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 9.6e-07 57.0 78 48.7
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 9.6e-07 57.0 78 48.7
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 9.6e-07 57.0 84 39.3
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 9.6e-07 57.0 106 42.5
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 9.6e-07 57.0 95 42.1
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 1.3e-06 56.6 80 43.8
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 1.3e-06 56.6 101 39.6
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 1.6e-06 56.2 86 41.9
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 2.1e-06 55.8 87 42.5
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 2.1e-06 55.8 90 38.9
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.8e-06 55.5 85 45.9
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.8e-06 55.5 90 41.1
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 3.7e-06 55.1 87 40.2
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 3.7e-06 55.1 96 42.7
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 4.8e-06 54.7 96 36.5
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 4.8e-06 54.7 88 39.8
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 4.8e-06 54.7 89 41.6
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 4.8e-06 54.7 90 38.9
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 6.2e-06 54.3 85 44.7
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 8.2e-06 53.9 96 40.6
Solyc02g080550.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 8.2e-06 53.9 91 41.8
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 8.2e-06 53.9 85 44.7


User provided reference genes

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