Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 4.6e-77 291.2 150 100.0
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 7.6e-32 141.0 183 47.0
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 2.4e-30 136.0 181 46.4
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 4.2e-30 135.2 190 46.8
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 9.6e-27 124.0 195 42.1
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 6.2e-26 121.3 123 51.2
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.2e-24 117.1 103 55.3
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 2.6e-24 115.9 183 41.5
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 3.4e-24 115.5 111 52.3
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.2e-23 112.8 172 43.6
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 4.9e-23 111.7 108 52.8
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 2.5e-22 109.4 96 52.1
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 1.6e-21 106.7 156 42.3
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.1e-21 106.3 109 46.8
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 2.7e-21 105.9 104 49.0
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 4.6e-21 105.1 140 42.9
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 2.3e-20 102.8 148 41.9
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 3.9e-20 102.1 87 54.0
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 8.7e-20 100.9 108 50.9
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 8.7e-20 100.9 131 42.7
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.1e-19 100.5 101 49.5
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.1e-19 100.5 101 49.5
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 1.5e-19 100.1 162 35.8
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 1.5e-19 100.1 141 40.4
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 5.7e-19 98.2 107 48.6
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 7.4e-19 97.8 150 39.3
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 9.7e-19 97.4 117 41.0
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 1.3e-18 97.1 82 53.7
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 1.6e-18 96.7 163 36.8
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.2e-18 96.3 137 39.4
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 2.8e-18 95.9 150 40.7
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 3.7e-18 95.5 122 44.3
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 3.7e-18 95.5 169 34.3
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 8.2e-18 94.4 120 45.0
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.1e-17 94.0 83 55.4
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.4e-17 93.6 120 44.2
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.4e-17 93.6 104 49.0
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.8e-17 93.2 113 41.6
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 2.4e-17 92.8 100 47.0
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 4.1e-17 92.0 159 35.2
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 6.9e-17 91.3 132 39.4
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 9.0e-17 90.9 104 46.2
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 1.2e-16 90.5 110 44.5
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.2e-16 90.5 128 40.6
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.5e-16 90.1 105 42.9
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.5e-16 90.1 103 46.6
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 2.6e-16 89.4 158 37.3
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 2.6e-16 89.4 144 37.5
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 2.6e-16 89.4 170 32.9
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 4.5e-16 88.6 101 43.6
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 4.5e-16 88.6 124 40.3
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 5.9e-16 88.2 125 36.0
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 7.6e-16 87.8 103 42.7
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 7.6e-16 87.8 155 37.4
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.0e-15 87.4 104 42.3
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.3e-15 87.0 109 41.3
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.3e-15 87.0 128 39.1
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 1.3e-15 87.0 84 54.8
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 1.3e-15 87.0 137 38.7
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.0e-15 85.1 87 48.3
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 8.5e-15 84.3 135 40.0
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 8.5e-15 84.3 176 33.5
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.1e-14 84.0 144 37.5
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.1e-14 84.0 183 33.9
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.5e-14 82.8 120 40.0
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 4.2e-14 82.0 90 44.4
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 7.2e-14 81.3 151 32.5
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.6e-13 80.1 95 42.1
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 2.7e-13 79.3 74 48.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 3.6e-13 79.0 80 46.2
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.6e-13 79.0 119 39.5
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 3.6e-13 79.0 119 38.7
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 3.6e-13 79.0 96 47.9
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 3.6e-13 79.0 119 41.2
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 4.6e-13 78.6 104 38.5
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.1e-13 78.2 96 47.9
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 7.9e-13 77.8 128 42.2
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 1.0e-12 77.4 134 38.1
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.8e-12 76.6 65 52.3
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 3.0e-12 75.9 150 34.0
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 8.8e-12 74.3 108 38.0
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 1.5e-11 73.6 164 32.9
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 4.3e-11 72.0 61 50.8
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 4.3e-11 72.0 79 41.8
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 5.7e-11 71.6 84 42.9
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 9.7e-11 70.9 65 50.8
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 1.7e-10 70.1 155 32.3
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.8e-10 69.3 135 31.1
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 6.3e-10 68.2 106 33.0
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 6.3e-10 68.2 99 35.4
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 8.2e-10 67.8 142 31.0
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.1e-09 67.4 144 31.9
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 1.4e-09 67.0 114 34.2
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 1.4e-09 67.0 166 28.9
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 1.4e-09 67.0 166 28.9
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 1.4e-09 67.0 97 39.2
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 1.8e-09 66.6 63 47.6
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.8e-09 66.6 97 35.1
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 3.1e-09 65.9 94 37.2
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 3.1e-09 65.9 123 33.3
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 3.1e-09 65.9 106 34.9
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 3.1e-09 65.9 103 34.0
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 4.1e-09 65.5 162 28.4
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 4.1e-09 65.5 123 33.3
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 4.1e-09 65.5 162 28.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 9.1e-09 64.3 162 28.4
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 5.9e-08 61.6 93 36.6
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.0e-07 60.8 79 39.2
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 1.0e-07 60.8 79 39.2
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 1.7e-07 60.1 90 40.0
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 2.9e-07 59.3 72 40.3


User provided reference genes

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