Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 1.1e-184 649.8 315 100.0
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 7.5e-114 414.5 319 69.0
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 7.5e-114 414.5 319 69.0
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 6.6e-110 401.4 321 67.0
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 1.7e-102 376.7 322 62.7
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 5.6e-101 371.7 322 60.6
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 1.1e-99 367.5 327 58.1
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 6.4e-97 358.2 299 64.2
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 9.5e-93 344.4 290 63.4
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 2.3e-91 339.7 295 62.4
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 3.8e-81 305.8 272 60.3
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 2.4e-80 303.1 298 57.0
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 2.3e-78 296.6 310 52.6
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 2.1e-76 290.0 300 51.7
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.9e-69 266.9 315 47.9
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.3e-68 264.2 305 49.2
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 2.1e-68 263.5 300 51.0
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 2.1e-68 263.5 304 48.0
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 6.2e-68 261.9 298 47.7
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 1.4e-67 260.8 315 47.6
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 2.6e-66 256.5 307 47.9
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 2.6e-66 256.5 300 45.0
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 4.5e-66 255.8 298 46.6
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 7.6e-66 255.0 300 44.7
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 1.3e-65 254.2 300 44.7
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 1.7e-65 253.8 291 47.8
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 2.9e-65 253.1 301 48.8
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 3.8e-65 252.7 294 49.7
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 6.4e-65 251.9 291 47.8
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.1e-64 251.1 304 46.7
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 1.4e-64 250.8 300 47.7
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 1.9e-64 250.4 304 47.0
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 7.1e-64 248.4 292 44.2
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 1.6e-63 247.3 296 47.0
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 3.5e-63 246.1 301 46.5
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 1.3e-62 244.2 296 47.3
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 1.5e-61 240.7 288 42.4
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 6.2e-60 235.3 311 41.8
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.4e-59 234.2 289 43.3
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.4e-59 234.2 291 43.0
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 4.0e-59 232.6 291 43.0
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 6.9e-59 231.9 244 49.6
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 1.2e-58 231.1 286 43.0
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 2.6e-58 229.9 306 42.2
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.3e-57 227.6 305 45.2
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 1.3e-57 227.6 305 44.3
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 2.2e-57 226.9 303 42.9
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 1.1e-56 224.6 297 44.8
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 3.2e-56 223.0 286 41.6
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 4.6e-55 219.2 257 45.9
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 1.3e-54 217.6 306 43.1
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 1.5e-53 214.2 289 43.9
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 1.9e-53 213.8 309 41.7
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 4.3e-53 212.6 257 45.5
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 4.3e-53 212.6 251 43.4
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 3.7e-52 209.5 298 42.6
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 3.7e-52 209.5 300 41.7
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 8.2e-52 208.4 304 41.4
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 2.4e-51 206.8 297 42.1
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 2.4e-51 206.8 296 41.9
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 6.9e-51 205.3 299 41.8
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 6.9e-51 205.3 298 41.6
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 9.0e-51 204.9 299 42.1
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 9.0e-51 204.9 297 41.8
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 9.0e-51 204.9 242 45.5
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 1.2e-50 204.5 298 41.3
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 1.5e-50 204.1 299 41.5
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 7.6e-50 201.8 286 40.2
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.0e-49 201.4 243 44.9
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 1.0e-49 201.4 252 44.8
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 8.4e-49 198.4 272 44.1
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 5.5e-48 195.7 280 42.5
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 2.1e-47 193.7 286 41.6
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 8.2e-44 181.8 301 36.2
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 3.1e-43 179.9 219 45.2
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 6.9e-43 178.7 279 38.7
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 5.0e-41 172.6 294 38.1
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 4.2e-40 169.5 320 34.7
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 1.7e-36 157.5 270 40.0
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 6.5e-33 145.6 304 33.2
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 4.4e-29 132.9 289 29.4
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 2.4e-27 127.1 291 28.5
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 1.3e-25 121.3 113 52.2
TPR.G18947 Trifolium pratense HOM05D006860 ORTHO05D009547 5.0e-25 119.4 89 66.3
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 8.8e-22 108.6 87 62.1
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 2.4e-19 100.5 80 62.5
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 1.2e-18 98.2 274 30.3
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 3.5e-18 96.7 308 27.9
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 3.5e-18 96.7 276 29.7
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 5.0e-17 92.8 277 25.3
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.1e-16 91.7 157 35.7
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 6.7e-14 82.4 295 28.8
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 1.5e-13 81.3 289 26.0
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 2.6e-13 80.5 157 32.5
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 2.6e-13 80.5 103 42.7
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 2.6e-13 80.5 111 40.5
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 3.3e-13 80.1 289 25.6
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 9.7e-13 78.6 289 26.0
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 9.7e-13 78.6 289 26.0
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 9.7e-13 78.6 289 26.0
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 9.7e-13 78.6 289 26.0
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 1.3e-12 78.2 281 26.7
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 1.7e-12 77.8 289 25.6
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 2.2e-12 77.4 287 26.8
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 1.1e-11 75.1 62 59.7
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 1.4e-11 74.7 291 26.1
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 1.4e-11 74.7 290 25.9
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 4.1e-11 73.2 296 26.7
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 5.3e-11 72.8 293 25.9
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 5.3e-11 72.8 293 25.9
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 9.1e-11 72.0 61 57.4
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 3.5e-10 70.1 289 25.6
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 7.7e-10 68.9 74 50.0
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 2.9e-09 67.0 289 29.1
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 3.8e-09 66.6 50 58.0
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.6e-07 61.2 64 46.9


User provided reference genes

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