Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0276141 Lupinus albus HOM05D004219 ORTHO05D004857 0.0e+00 1532.7 749 100.0
Lalb_Chr08g0232811 Lupinus albus HOM05D004219 ORTHO05D004857 0.0e+00 1380.9 748 90.0
Lj6g0016067 Lotus japonicus HOM05D004219 ORTHO05D004857 0.0e+00 1294.3 755 84.1
Glyma.U031325 Glycine max HOM05D004219 ORTHO05D004857 0.0e+00 1287.3 754 84.2
VMungo1309G2772 Vigna mungo HOM05D004219 ORTHO05D004857 0.0e+00 1285.8 754 83.4
Phvul.009G223200 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 0.0e+00 1280.8 754 83.2
Glyma.09G074300 Glycine max HOM05D004219 ORTHO05D004857 0.0e+00 1276.5 754 83.6
Medtr2g044550 Medicago truncatula HOM05D004219 ORTHO05D004857 0.0e+00 1261.9 760 82.2
TPR.G26875 Trifolium pratense HOM05D004219 ORTHO05D004857 0.0e+00 1253.8 759 81.9
Ca_02284_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 0.0e+00 1201.0 763 79.4
Thecc.09G069400 Theobroma cacao HOM05D004219 ORTHO05D004857 0.0e+00 1106.3 757 73.1
Cpa.g.sc82.51 Carica papaya HOM05D004219 ORTHO05D004857 0.0e+00 1105.9 753 72.1
Manes.16G089900 Manihot esculenta HOM05D004219 ORTHO05D004857 0.0e+00 1102.8 756 73.1
Ciclev10007563m.g Citrus clementina HOM05D004219 ORTHO05D004857 0.0e+00 1100.9 756 72.5
Duzib150G0120 Durio zibethinus HOM05D004219 ORTHO05D004857 0.0e+00 1096.6 762 72.8
Duzib168G0770 Durio zibethinus HOM05D004219 ORTHO05D004857 0.0e+00 1094.3 757 72.7
QL11p003182 Quercus lobata HOM05D004219 ORTHO05D004857 0.0e+00 1094.0 754 72.3
Manes.03G045300 Manihot esculenta HOM05D004219 ORTHO05D004857 0.0e+00 1085.9 756 71.3
TWI63G0110 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 0.0e+00 1083.9 755 71.3
Duzib187G1712 Durio zibethinus HOM05D004219 ORTHO05D004857 0.0e+00 1079.3 757 71.9
Gohir.A07G017500 Gossypium hirsutum HOM05D004219 ORTHO05D004857 0.0e+00 1077.8 757 71.7
Sabra18G0057200 Salix brachista HOM05D004219 ORTHO05D004857 5.1e-312 1074.3 756 70.9
Gorai.001G018000 Gossypium raimondii HOM05D004219 ORTHO05D004857 5.1e-312 1073.5 757 71.6
Potri.006G135500 Populus trichocarpa HOM05D004219 ORTHO05D004857 5.1e-312 1073.5 756 71.2
Potri.018G064500 Populus trichocarpa HOM05D004219 ORTHO05D004857 2.3e-310 1068.5 756 71.0
arahy.Tifrunner.gnm1.ann1.BBC6WZ Arachis hypogaea HOM05D004219 ORTHO05D004857 1.9e-309 1065.4 757 72.5
arahy.Tifrunner.gnm1.ann1.82J223 Arachis hypogaea HOM05D004219 ORTHO05D004857 4.3e-309 1064.3 757 72.3
TWI34G1001 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 7.3e-309 1063.5 755 70.1
TAR383G0549 Trochodendron aralioides HOM05D004219 ORTHO05D004857 1.6e-308 1062.4 780 67.9
Gorai.009G038600 Gossypium raimondii HOM05D004219 ORTHO05D004857 2.4e-307 1058.5 756 70.4
Eucgr.C00764 Eucalyptus grandis HOM05D004219 ORTHO05D004857 8.9e-307 1056.6 756 70.5
Gorai.010G095800 Gossypium raimondii HOM05D004219 ORTHO05D004857 1.7e-305 1052.4 756 71.0
GSVIVG01015005001 Vitis vinifera HOM05D004219 ORTHO05D004857 2.9e-305 1051.6 754 70.2
Dinv20389 Davidia involucrata HOM05D004219 ORTHO05D004857 1.9e-304 1048.9 778 67.6
Gohir.D05G038100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 7.1e-304 1047.0 756 70.0
Gohir.A05G036600 Gossypium hirsutum HOM05D004219 ORTHO05D004857 9.2e-304 1046.6 754 69.6
Nn6g35715 Nelumbo nucifera HOM05D004219 ORTHO05D004857 1.3e-302 1042.7 779 66.9
Gohir.A06G084100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.3e-302 1042.0 757 70.7
CSS0000587 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 6.6e-302 1040.4 778 67.4
CSS0038823 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 8.7e-302 1040.0 778 67.4
Actinidia21828 Actinidia chinensis HOM05D004219 ORTHO05D004857 1.1e-301 1039.6 772 68.0
MBI13_g01684_MAGBIO Magnolia biondii HOM05D004219 ORTHO05D004857 7.3e-301 1036.9 780 67.7
GSVIVG01016680001 Vitis vinifera HOM05D004219 ORTHO05D004857 1.2e-300 1036.2 754 68.7
Psat1g137920 Pisum sativum HOM05D004219 ORTHO05D004857 2.8e-300 1035.0 662 78.1
TAR624G1175 Trochodendron aralioides HOM05D004219 ORTHO05D004857 8.1e-300 1033.5 789 66.9
Rhsim08G0243800 Rhododendron simsii HOM05D004219 ORTHO05D004857 8.7e-294 1013.4 801 64.8
Cc04_g00810 Coffea canephora HOM05D004219 ORTHO05D004857 2.5e-293 1011.9 778 65.8
vmacro15080 Vaccinium macrocarpon HOM05D004219 ORTHO05D004857 2.5e-293 1011.9 793 65.7
Cfa002934 Carpinus fangiana HOM05D004219 ORTHO05D004857 2.1e-292 1008.8 724 70.7
CiPaw.01G212300 Carya illinoinensis HOM05D004219 ORTHO05D004857 3.6e-292 1008.1 772 64.8
Gohir.D06G082300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 3.6e-292 1008.1 751 68.6
Cfa003467 Carpinus fangiana HOM05D004219 ORTHO05D004857 1.8e-291 1005.7 771 64.2
QL05p001749 Quercus lobata HOM05D004219 ORTHO05D004857 7.6e-290 1000.3 770 64.2
CiPaw.02G131700 Carya illinoinensis HOM05D004219 ORTHO05D004857 1.7e-289 999.2 772 63.6
PGR142G3683 Punica granatum HOM05D004219 ORTHO05D004857 2.2e-289 998.8 757 67.1
QL05p001473 Quercus lobata HOM05D004219 ORTHO05D004857 6.4e-289 997.3 770 64.0
MD17G1153300 Malus domestica HOM05D004219 ORTHO05D004857 2.1e-287 992.3 776 63.8
Lj5A30T66 Lonicera japonica HOM05D004219 ORTHO05D004857 1.0e-286 989.9 756 65.6
Gohir.D07G017300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 3.0e-286 988.4 757 67.2
Nitab4.5_0004589g0030 Nicotiana tabacum HOM05D004219 ORTHO05D004857 3.9e-286 988.0 775 64.4
MD09G1173700 Malus domestica HOM05D004219 ORTHO05D004857 6.7e-286 987.3 777 63.4
CAN.G1721.2 Capsicum annuum HOM05D004219 ORTHO05D004857 1.1e-285 986.5 775 65.0
Peaxi162Scf00177g00619 Petunia axillaris HOM05D004219 ORTHO05D004857 1.9e-285 985.7 775 64.1
CANSAT56G2968 Cannabis sativa HOM05D004219 ORTHO05D004857 3.3e-285 984.9 776 63.1
Nitab4.5_0000357g0090 Nicotiana tabacum HOM05D004219 ORTHO05D004857 4.3e-285 984.6 776 63.9
Aqoxy7G00940 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 7.4e-285 983.8 781 64.3
Prupe.3G031800 Prunus persica HOM05D004219 ORTHO05D004857 9.6e-285 983.4 777 63.6
PGSC0003DMG400028852 Solanum tuberosum HOM05D004219 ORTHO05D004857 1.6e-284 982.6 773 64.6
Sopen12g024040 Solanum pennellii HOM05D004219 ORTHO05D004857 4.5e-282 974.5 774 64.0
THA.LOC104799604 Tarenaya hassleriana HOM05D004219 ORTHO05D004857 4.2e-280 968.0 756 64.9
Solyc12g049570.3 Solanum lycopersicum HOM05D004219 ORTHO05D004857 7.1e-280 967.2 774 63.7
Carub.0005s0906 Capsella rubella HOM05D004219 ORTHO05D004857 1.2e-279 966.5 755 64.9
PSO724G0293 Papaver somniferum HOM05D004219 ORTHO05D004857 3.5e-279 964.9 773 63.8
DCAR_016092 Daucus carota HOM05D004219 ORTHO05D004857 4.6e-279 964.5 770 62.9
AL5G21340 Arabidopsis lyrata HOM05D004219 ORTHO05D004857 6.0e-279 964.1 755 64.5
AT3G43240 Arabidopsis thaliana HOM05D004219 ORTHO05D004857 7.9e-279 963.8 754 64.7
RcHm_v2.0_Chr2g0147711 Rosa chinensis HOM05D004219 ORTHO05D004857 1.0e-278 963.4 776 62.8
HanXRQChr09g0277221 Helianthus annuus HOM05D004219 ORTHO05D004857 2.3e-278 962.2 729 65.8
PSO135G0149 Papaver somniferum HOM05D004219 ORTHO05D004857 2.3e-278 962.2 768 63.3
Thhalv10002415m.g Eutrema salsugineum HOM05D004219 ORTHO05D004857 1.5e-277 959.5 755 64.2
Sp5g18450 Schrenkiella parvula HOM05D004219 ORTHO05D004857 2.5e-277 958.7 754 64.5
BcaB01g01229 Brassica carinata HOM05D004219 ORTHO05D004857 2.1e-276 955.7 758 64.4
CARHR153440 Cardamine hirsuta HOM05D004219 ORTHO05D004857 2.8e-276 955.3 754 64.1
FAN09G1853 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.1e-275 951.8 776 62.4
FvH4_6g35710 Fragaria vesca HOM05D004219 ORTHO05D004857 1.2e-274 949.9 776 62.2
FAN14G4832 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.2e-274 949.9 776 62.2
Glyma.16G013100 Glycine max HOM05D004219 ORTHO05D004857 1.5e-274 949.5 776 61.3
Oeu059024.1 Olea europaea HOM05D004219 ORTHO05D004857 5.8e-274 947.6 774 62.8
FAN02G2730 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.3e-273 946.4 776 61.7
Glyma.07G045100 Glycine max HOM05D004219 ORTHO05D004857 2.2e-273 945.7 776 61.1
BcaC01g02109 Brassica carinata HOM05D004219 ORTHO05D004857 2.9e-273 945.3 756 64.0
A06p22640 Brassica napus HOM05D004219 ORTHO05D004857 3.8e-273 944.9 757 63.9
Hund05707 Selenicereus undatus HOM05D004219 ORTHO05D004857 8.4e-273 943.7 773 62.0
AUR62025624 Chenopodium quinoa HOM05D004219 ORTHO05D004857 6.0e-271 937.6 805 60.0
TPR.G18148 Trifolium pratense HOM05D004219 ORTHO05D004857 2.3e-270 935.6 779 60.6
Haze_26074 Corylus avellana HOM05D004219 ORTHO05D004857 2.5e-269 932.2 837 60.1
BolC3t19092H Brassica oleracea HOM05D004219 ORTHO05D004857 3.7e-268 928.3 760 63.4
Sc15g0000780 Simmondsia chinensis HOM05D004219 ORTHO05D004857 6.3e-268 927.5 772 60.5
MELO3C022696.2 Cucumis melo HOM05D004219 ORTHO05D004857 8.2e-268 927.2 779 60.1
COL.COLO4_21198 Corchorus olitorius HOM05D004219 ORTHO05D004857 1.4e-267 926.4 756 64.6
CDE04G3533 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 1.8e-267 926.0 775 61.4
Phvul.010G123900 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 2.4e-267 925.6 776 60.2
ECA232G2871 Erigeron canadensis HOM05D004219 ORTHO05D004857 3.4e-266 921.8 767 61.3
Migut.I01126 Erythranthe guttata HOM05D004219 ORTHO05D004857 3.4e-266 921.8 778 60.0
ATR0099G075 Amborella trichopoda HOM05D004219 ORTHO05D004857 4.5e-266 921.4 807 60.1
CsaV3_3G030980 Cucumis sativus L. HOM05D004219 ORTHO05D004857 3.8e-265 918.3 779 59.4
Medtr8g022980 Medicago truncatula HOM05D004219 ORTHO05D004857 2.5e-264 915.6 760 60.3
Haze_16129 Corylus avellana HOM05D004219 ORTHO05D004857 7.2e-264 914.1 806 57.8
Psat4g165840 Pisum sativum HOM05D004219 ORTHO05D004857 6.1e-263 911.0 780 58.3
Ca_23428_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 1.8e-262 909.4 779 59.1
VMungo0331G1133 Vigna mungo HOM05D004219 ORTHO05D004857 3.3e-261 905.2 776 59.7
HPP92_019289 Vanilla planifolia HOM05D004219 ORTHO05D004857 4.3e-261 904.8 778 59.5
Aqoxy7G04168 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 7.4e-261 904.0 768 61.1
Sed0001277 Sechium edule HOM05D004219 ORTHO05D004857 7.4e-261 904.0 778 58.9
Lj3g0000905 Lotus japonicus HOM05D004219 ORTHO05D004857 9.7e-261 903.7 779 58.9
Lalb_Chr17g0343311 Lupinus albus HOM05D004219 ORTHO05D004857 9.7e-261 903.7 768 58.9
Aa31LG4G12950 Aethionema arabicum HOM05D004219 ORTHO05D004857 1.7e-260 902.9 772 60.6
Lalb_Chr04g0253891 Lupinus albus HOM05D004219 ORTHO05D004857 6.3e-260 901.0 777 58.9
Sed0013084 Sechium edule HOM05D004219 ORTHO05D004857 1.3e-257 893.3 778 58.7
EL10Ac7g16483 Beta vulgaris HOM05D004219 ORTHO05D004857 8.5e-257 890.6 774 59.9
ClCG09G001310 Citrullus lanatus HOM05D004219 ORTHO05D004857 3.9e-254 881.7 779 58.5
Hma1.2p1_0229F.1_g097030 Hydrangea macrophylla HOM05D004219 ORTHO05D004857 5.7e-253 877.9 706 63.2
CsaV3_7G034010 Cucumis sativus L. HOM05D004219 ORTHO05D004857 7.4e-253 877.5 780 58.8
Zm00001eb313820 Zea mays HOM05D004219 ORTHO05D004857 9.7e-253 877.1 761 58.6
Sed0013718 Sechium edule HOM05D004219 ORTHO05D004857 3.5e-250 868.6 780 58.2
ClCG07G014320 Citrullus lanatus HOM05D004219 ORTHO05D004857 1.7e-249 866.3 756 59.0
TAR626G0374 Trochodendron aralioides HOM05D004219 ORTHO05D004857 2.1e-247 859.4 752 59.8
Zm00001eb099960 Zea mays HOM05D004219 ORTHO05D004857 2.8e-244 849.0 761 57.4
Ah.08g217310 Amaranthus hybridus HOM05D004219 ORTHO05D004857 3.5e-242 842.0 773 57.1
Os08g0451400 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.7e-241 839.7 759 56.3
Lsat_1_v5_gn_4_92081 Lactuca sativa HOM05D004219 ORTHO05D004857 5.0e-241 838.2 721 61.6
PGR044G2279 Punica granatum HOM05D004219 ORTHO05D004857 6.1e-239 831.2 773 56.5
Sabra06G0106200 Salix brachista HOM05D004219 ORTHO05D004857 1.2e-229 800.4 684 62.4
SGA_v2.0_scaffold71G23915 Striga asiatica HOM05D004219 ORTHO05D004857 1.5e-229 800.0 764 55.2
unitig_26.g8917 Utricularia gibba HOM05D004219 ORTHO05D004857 2.0e-229 799.7 773 53.8
MELO3C024313.2 Cucumis melo HOM05D004219 ORTHO05D004857 4.4e-229 798.5 772 55.8
Eucgr.I02158 Eucalyptus grandis HOM05D004219 ORTHO05D004857 2.7e-226 789.3 740 55.5
AUR62001416 Chenopodium quinoa HOM05D004219 ORTHO05D004857 1.1e-208 730.7 741 53.4
Pp3c15_1350 Physcomitrium patens HOM05D004219 ORTHO05D004857 6.9e-182 641.7 743 46.3
Mapoly0094s0004 Marchantia polymorpha HOM05D004219 ORTHO05D004857 2.3e-177 626.7 774 44.8
BraA06t25350Z Brassica rapa HOM05D004219 ORTHO05D004857 1.3e-172 610.9 421 70.3
Actinidia24435 Actinidia chinensis HOM05D004219 ORTHO05D004857 7.9e-170 601.7 754 45.8
SMO133G0025 Selaginella moellendorffii HOM05D004219 ORTHO05D004857 2.1e-167 593.6 770 43.9
Zm00001eb040700 Zea mays HOM05D004219 ORTHO05D004857 2.1e-167 593.6 735 44.8
Pp3c6_26590 Physcomitrium patens HOM05D004219 ORTHO05D004857 4.8e-167 592.4 743 44.0
Atru.chr7.1780 Acer truncatum HOM05D004219 ORTHO05D004857 9.3e-155 551.6 422 68.5
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 1.1e-152 544.7 755 41.6
arahy.Tifrunner.gnm1.ann1.B45F8N Arachis hypogaea HOM05D004219 ORTHO05D004857 1.4e-145 521.2 387 63.8
arahy.Tifrunner.gnm1.ann1.W70I1I Arachis hypogaea HOM05D004219 ORTHO05D004857 1.4e-145 521.2 387 63.8
Atru.chr7.1779 Acer truncatum HOM05D004219 ORTHO05D004857 2.0e-141 507.3 279 84.2
unitig_749.g14037 Utricularia gibba HOM05D004219 ORTHO05D004857 2.0e-141 507.3 392 63.5
AagrBONN_evm.TU.Sc2ySwM_344.4361 Anthoceros agrestis HOM05D004219 ORTHO05D004857 2.9e-132 476.9 566 45.2
CDE06G2764 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 2.9e-116 423.7 253 78.3
CDE06G0638 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 8.5e-116 422.2 463 52.3
Os08g0451700 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 2.2e-103 380.9 455 46.6
CBR_g66811 Chara braunii HOM05D004219 ORTHO05D004857 4.0e-97 360.1 764 34.6
Os09g0434100 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 6.6e-68 263.1 271 51.7
Cre10.g429880 Chlamydomonas reinhardtii HOM05D004219 ORTHO05D004857 3.1e-65 254.2 771 28.5
unitig_749.g14036 Utricularia gibba HOM05D004219 ORTHO05D004857 1.9e-51 208.4 288 41.7
Medtr8g038730 Medicago truncatula HOM05D004219 ORTHO05D004857 3.8e-47 194.1 190 53.2
Nn5g27342 Nelumbo nucifera HOM05D004219 ORTHO05D004857 2.3e-44 184.9 144 62.5
Os09g0434000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 3.2e-38 164.5 82 82.9
TAR383G0322 Trochodendron aralioides HOM05D004219 ORTHO05D004857 1.3e-34 152.5 149 58.4
FAN05G1825 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.6e-29 135.6 65 84.6
Os08g0361000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 2.4e-17 95.1 140 40.0
Os08g0451500 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.3e-15 89.4 139 36.7
MCO07G528 Micromonas commoda HOM05D004219 ORTHO05D004857 2.7e-13 81.6 103 42.7
MCO06G115 Micromonas commoda HOM05D000966 ORTHO05D004857 2.3e-12 78.6 154 30.5
BolSC21t60256H Brassica oleracea HOM05D020425 ORTHO05D021983 8.8e-12 76.6 108 44.4
C03p67880 Brassica napus HOM05D020425 ORTHO05D021983 6.3e-10 70.5 101 41.6
AUR62025956 Chenopodium quinoa HOM05D000121 ORTHO05D024978 3.1e-09 68.2 67 55.2
Oeu028234.1 Olea europaea HOM05D004219 ORTHO05D004857 9.1e-09 66.6 89 43.8


User provided reference genes

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