Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0275481 Lupinus albus HOM05D002736 ORTHO05D003882 2.9e-99 365.2 176 100.0
Lalb_Chr09g0324331 Lupinus albus HOM05D002736 ORTHO05D003882 5.3e-85 317.8 190 85.3
Lalb_Chr16g0379531 Lupinus albus HOM05D002736 ORTHO05D003882 1.6e-81 306.2 190 80.0
Lj1g0009096 Lotus japonicus HOM05D002736 ORTHO05D003882 9.7e-79 297.0 190 78.9
Psat5g170080 Pisum sativum HOM05D002736 ORTHO05D003882 9.7e-79 297.0 189 77.8
Glyma.01G208100 Glycine max HOM05D002736 ORTHO05D003882 2.8e-78 295.4 190 77.4
Lj3g0011514 Lotus japonicus HOM05D002736 ORTHO05D003882 2.8e-78 295.4 190 78.4
VMungo1215G1077 Vigna mungo HOM05D002736 ORTHO05D003882 1.4e-77 293.1 189 76.2
Phvul.002G085100 Phaseolus vulgaris HOM05D002736 ORTHO05D003882 1.8e-77 292.7 189 75.1
Ca_20190_v3 Cicer arietinum L. HOM05D002736 ORTHO05D003882 2.4e-77 292.4 189 76.7
Glyma.11G034100 Glycine max HOM05D002736 ORTHO05D003882 2.0e-76 289.3 190 75.3
Lj6g0005327 Lotus japonicus HOM05D002736 ORTHO05D003882 2.0e-76 289.3 190 76.3
Eucgr.H01506 Eucalyptus grandis HOM05D002736 ORTHO05D003882 4.2e-74 281.6 190 72.6
Lj2g0020826 Lotus japonicus HOM05D002736 ORTHO05D003882 4.2e-74 281.6 190 74.2
TPR.G30745 Trifolium pratense HOM05D002736 ORTHO05D003882 1.6e-73 279.6 189 73.0
Sed0008782 Sechium edule HOM05D002736 ORTHO05D003882 2.1e-73 279.3 190 71.6
Sed0009276 Sechium edule HOM05D002736 ORTHO05D003882 2.1e-73 279.3 190 71.6
RcHm_v2.0_Chr1g0336121 Rosa chinensis HOM05D002736 ORTHO05D003882 3.6e-73 278.5 190 71.1
MD08G1244600 Malus domestica HOM05D002736 ORTHO05D003882 4.7e-73 278.1 189 70.9
Manes.07G026300 Manihot esculenta HOM05D002736 ORTHO05D003882 4.7e-73 278.1 190 70.0
arahy.Tifrunner.gnm1.ann1.3AX6CG Arachis hypogaea HOM05D002736 ORTHO05D003882 8.0e-73 277.3 191 72.3
arahy.Tifrunner.gnm1.ann1.SQPQ35 Arachis hypogaea HOM05D002736 ORTHO05D003882 8.0e-73 277.3 191 72.3
Gohir.A11G237100 Gossypium hirsutum HOM05D002736 ORTHO05D003882 8.0e-73 277.3 189 70.9
Gohir.D11G247600 Gossypium hirsutum HOM05D002736 ORTHO05D003882 8.0e-73 277.3 189 70.9
Gorai.007G263900 Gossypium raimondii HOM05D002736 ORTHO05D003882 8.0e-73 277.3 189 70.9
CANSAT56G1406 Cannabis sativa HOM05D002736 ORTHO05D003882 1.0e-72 276.9 189 71.4
Sed0026141 Sechium edule HOM05D002736 ORTHO05D003882 1.4e-72 276.6 190 70.5
PGR042G0883 Punica granatum HOM05D002736 ORTHO05D003882 2.3e-72 275.8 190 71.1
ClCG03G002180 Citrullus lanatus HOM05D002736 ORTHO05D003882 3.0e-72 275.4 190 70.0
MD15G1439400 Malus domestica HOM05D002736 ORTHO05D003882 3.0e-72 275.4 189 70.9
Hma1.2p1_0207F.1_g087750 Hydrangea macrophylla HOM05D002736 ORTHO05D003882 4.0e-72 275.0 190 70.0
MBI06_g06679_MAGBIO Magnolia biondii HOM05D002736 ORTHO05D003882 4.0e-72 275.0 190 70.5
Thecc.05G252500 Theobroma cacao HOM05D002736 ORTHO05D003882 4.0e-72 275.0 189 70.4
MELO3C005060.2 Cucumis melo HOM05D002736 ORTHO05D003882 5.2e-72 274.6 189 69.3
THA.LOC104816828 Tarenaya hassleriana HOM05D002736 ORTHO05D003882 5.2e-72 274.6 190 70.0
CsaV3_1G012830 Cucumis sativus L. HOM05D002736 ORTHO05D003882 8.8e-72 273.9 189 69.8
Dinv29610 Davidia involucrata HOM05D002736 ORTHO05D003882 8.8e-72 273.9 190 70.5
Duzib128G0674 Durio zibethinus HOM05D002736 ORTHO05D003882 1.2e-71 273.5 189 70.4
RcHm_v2.0_Chr1g0373331 Rosa chinensis HOM05D002736 ORTHO05D003882 1.2e-71 273.5 190 70.0
Prupe.1G582000 Prunus persica HOM05D002736 ORTHO05D003882 2.0e-71 272.7 189 69.8
Ciclev10000088m.g Citrus clementina HOM05D002736 ORTHO05D003882 3.4e-71 271.9 189 68.3
Cpa.g.sc113.23 Carica papaya HOM05D002736 ORTHO05D003882 4.4e-71 271.6 190 68.9
Haze_03584 Corylus avellana HOM05D002736 ORTHO05D003882 4.4e-71 271.6 189 70.4
Duzib177G0256 Durio zibethinus HOM05D002736 ORTHO05D003882 4.4e-71 271.6 189 68.8
Duzib177G0909 Durio zibethinus HOM05D002736 ORTHO05D003882 4.4e-71 271.6 189 68.8
Manes.10G115700 Manihot esculenta HOM05D002736 ORTHO05D003882 4.4e-71 271.6 190 68.9
Duzib154G0001 Durio zibethinus HOM05D002736 ORTHO05D003882 7.5e-71 270.8 189 68.8
Duzib177G1145 Durio zibethinus HOM05D002736 ORTHO05D003882 7.5e-71 270.8 189 68.8
THA.LOC104823704 Tarenaya hassleriana HOM05D002736 ORTHO05D003882 7.5e-71 270.8 190 67.9
QL12p006954 Quercus lobata HOM05D002736 ORTHO05D003882 9.8e-71 270.4 190 68.9
Ah.11g041020 Amaranthus hybridus HOM05D002736 ORTHO05D003882 1.3e-70 270.0 190 69.5
Hma1.2p1_1179F.1_g264530 Hydrangea macrophylla HOM05D002736 ORTHO05D003882 1.7e-70 269.6 190 68.4
MBI18_g35650_MAGBIO Magnolia biondii HOM05D002736 ORTHO05D003882 2.2e-70 269.2 190 68.4
TWI74G0802 Tripterygium wilfordii HOM05D002736 ORTHO05D003882 2.2e-70 269.2 190 71.6
TAR624G0429 Trochodendron aralioides HOM05D002736 ORTHO05D003882 2.2e-70 269.2 190 68.4
Aa31LG1G5380 Aethionema arabicum HOM05D002736 ORTHO05D003882 3.7e-70 268.5 189 67.2
Cfa010638 Carpinus fangiana HOM05D002736 ORTHO05D003882 3.7e-70 268.5 189 69.3
AUR62034730 Chenopodium quinoa HOM05D002736 ORTHO05D003882 3.7e-70 268.5 190 68.4
Haze_10026 Corylus avellana HOM05D002736 ORTHO05D003882 4.8e-70 268.1 189 69.8
AUR62029614 Chenopodium quinoa HOM05D002736 ORTHO05D003882 6.3e-70 267.7 190 68.4
Nn7g37033 Nelumbo nucifera HOM05D002736 ORTHO05D003882 6.3e-70 267.7 190 66.3
TAR636G0048 Trochodendron aralioides HOM05D002736 ORTHO05D003882 6.3e-70 267.7 188 69.1
Atru.chr8.1477 Acer truncatum HOM05D002736 ORTHO05D003882 8.3e-70 267.3 190 66.8
Hund03390 Selenicereus undatus HOM05D002736 ORTHO05D003882 8.3e-70 267.3 190 69.5
TAR381G0578 Trochodendron aralioides HOM05D002736 ORTHO05D003882 8.3e-70 267.3 189 68.3
CARHR040170 Cardamine hirsuta HOM05D002736 ORTHO05D003882 1.1e-69 266.9 190 68.4
Ah.01g021420 Amaranthus hybridus HOM05D002736 ORTHO05D003882 1.4e-69 266.5 190 68.9
EL10Ac1g01012 Beta vulgaris HOM05D002736 ORTHO05D003882 1.4e-69 266.5 189 69.3
AUR62034823 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.8e-69 266.2 190 68.4
PSO063G4363 Papaver somniferum HOM05D002736 ORTHO05D003882 1.8e-69 266.2 190 67.4
SHI16267 Sapria himalayana HOM05D002736 ORTHO05D003882 1.8e-69 266.2 189 68.3
AL1G20150 Arabidopsis lyrata HOM05D002736 ORTHO05D003882 2.4e-69 265.8 190 68.4
CARHR189180 Cardamine hirsuta HOM05D002736 ORTHO05D003882 2.4e-69 265.8 190 67.4
Potri.004G226700 Populus trichocarpa HOM05D002736 ORTHO05D003882 2.4e-69 265.8 189 68.3
Sabra01G0172100 Salix brachista HOM05D002736 ORTHO05D003882 2.4e-69 265.8 189 69.3
CiPaw.05G003300 Carya illinoinensis HOM05D002736 ORTHO05D003882 3.1e-69 265.4 189 68.3
AUR62044762 Chenopodium quinoa HOM05D002736 ORTHO05D003882 3.1e-69 265.4 190 67.9
Sp1g08230 Schrenkiella parvula HOM05D002736 ORTHO05D003882 3.1e-69 265.4 190 67.9
EL10Ac1g00169 Beta vulgaris HOM05D002736 ORTHO05D003882 4.1e-69 265.0 189 68.8
CDE04G0595 Ceratophyllum demersum HOM05D002736 ORTHO05D003882 4.1e-69 265.0 190 67.9
AUR62042448 Chenopodium quinoa HOM05D002736 ORTHO05D003882 4.1e-69 265.0 190 67.9
FvH4_1g25930 Fragaria vesca HOM05D002736 ORTHO05D003882 4.1e-69 265.0 189 68.3
FAN19G2929 Fragaria x ananassa HOM05D002736 ORTHO05D003882 4.1e-69 265.0 189 68.3
FAN28G0165 Fragaria x ananassa HOM05D002736 ORTHO05D003882 4.1e-69 265.0 189 68.3
FAN26G2788 Fragaria x ananassa HOM05D002736 ORTHO05D003882 5.4e-69 264.6 189 67.7
C05p07670 Brassica napus HOM05D002736 ORTHO05D003882 7.0e-69 264.2 190 67.4
BolC5t29518H Brassica oleracea HOM05D002736 ORTHO05D003882 7.0e-69 264.2 190 67.4
Thhalv10006633m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 7.0e-69 264.2 190 67.9
Medtr7g006450 Medicago truncatula HOM05D002736 ORTHO05D003882 7.0e-69 264.2 190 70.5
Atru.chr6.461 Acer truncatum HOM05D002736 ORTHO05D003882 9.1e-69 263.8 190 65.8
CDE12G0193 Ceratophyllum demersum HOM05D002736 ORTHO05D003882 9.1e-69 263.8 190 66.8
AT1G09620 Arabidopsis thaliana HOM05D002736 ORTHO05D003882 1.2e-68 263.5 190 67.9
AUR62033656 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.2e-68 263.5 190 67.4
Sc18g0002120 Simmondsia chinensis HOM05D002736 ORTHO05D003882 3.5e-68 261.9 190 68.9
COL.COLO4_36050 Corchorus olitorius HOM05D002736 ORTHO05D003882 4.5e-68 261.5 190 65.3
Carub.0001s3928 Capsella rubella HOM05D002736 ORTHO05D003882 5.9e-68 261.2 190 66.3
Os09g0503400 Oryza sativa ssp. japonica HOM05D002736 ORTHO05D003882 5.9e-68 261.2 189 66.7
PSO017G1340 Papaver somniferum HOM05D002736 ORTHO05D003882 5.9e-68 261.2 190 65.8
Potri.003G003900 Populus trichocarpa HOM05D002736 ORTHO05D003882 5.9e-68 261.2 189 67.7
ATR1120G086 Amborella trichopoda HOM05D002736 ORTHO05D003882 1.7e-67 259.6 189 66.1
Mapoly0153s0002 Marchantia polymorpha HOM05D002736 ORTHO05D003882 2.9e-67 258.8 189 65.1
COL.COLO4_12093 Corchorus olitorius HOM05D002736 ORTHO05D003882 5.0e-67 258.1 190 64.7
Zm00001eb067180 Zea mays HOM05D002736 ORTHO05D003882 5.0e-67 258.1 189 66.1
Zm00001eb097790 Zea mays HOM05D002736 ORTHO05D003882 5.0e-67 258.1 189 66.1
Nitab4.5_0000020g0270 Nicotiana tabacum HOM05D002736 ORTHO05D003882 8.6e-67 257.3 190 66.8
AagrBONN_evm.TU.Sc2ySwM_228.2691 Anthoceros agrestis HOM05D002736 ORTHO05D003882 1.1e-66 256.9 189 64.6
PGSC0003DMG400013102 Solanum tuberosum HOM05D002736 ORTHO05D003882 1.1e-66 256.9 190 67.4
Carub.0001s0897 Capsella rubella HOM05D002736 ORTHO05D003882 1.5e-66 256.5 190 65.3
Nitab4.5_0001431g0010 Nicotiana tabacum HOM05D002736 ORTHO05D003882 1.5e-66 256.5 190 66.8
SalBow6G6103 Salvia bowleyana HOM05D002736 ORTHO05D003882 1.5e-66 256.5 190 66.8
SalBow1G4786 Salvia bowleyana HOM05D002736 ORTHO05D003882 1.9e-66 256.1 190 66.3
Aqoxy2G02985 Aquilegia oxysepala HOM05D002736 ORTHO05D003882 2.5e-66 255.8 191 64.4
Os09g0378300 Oryza sativa ssp. japonica HOM05D002736 ORTHO05D003882 2.5e-66 255.8 189 65.6
SEGI_37954 Sequoiadendron giganteum HOM05D002736 ORTHO05D003882 2.5e-66 255.8 189 64.6
Thhalv10027096m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 3.2e-66 255.4 190 65.3
Solyc02g065300.1 Solanum lycopersicum HOM05D002736 ORTHO05D003882 4.2e-66 255.0 190 66.3
Sopen02g018270 Solanum pennellii HOM05D002736 ORTHO05D003882 4.2e-66 255.0 190 65.8
BraA09t41885Z Brassica rapa HOM05D002736 ORTHO05D003882 5.5e-66 254.6 190 64.2
PGSC0003DMG400010338 Solanum tuberosum HOM05D002736 ORTHO05D003882 5.5e-66 254.6 190 65.8
Nitab4.5_0008538g0020 Nicotiana tabacum HOM05D002736 ORTHO05D003882 7.2e-66 254.2 190 66.3
Sopen02g015450 Solanum pennellii HOM05D002736 ORTHO05D003882 7.2e-66 254.2 190 66.3
AL1G57770 Arabidopsis lyrata HOM05D002736 ORTHO05D003882 1.6e-65 253.1 190 65.3
Oeu046641.1 Olea europaea HOM05D002736 ORTHO05D003882 2.1e-65 252.7 190 66.3
SEGI_07104 Sequoiadendron giganteum HOM05D002736 ORTHO05D003882 2.8e-65 252.3 190 64.7
Cc03_g11150 Coffea canephora HOM05D002736 ORTHO05D003882 3.6e-65 251.9 190 65.3
Nitab4.5_0012056g0010 Nicotiana tabacum HOM05D002736 ORTHO05D003882 3.6e-65 251.9 190 65.8
MSTRG.392 Avicennia marina HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 65.8
BcaC07g41869 Brassica carinata HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 63.2
C08p49360 Brassica napus HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 63.2
BolC8t52473H Brassica oleracea HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 63.2
AUR62007554 Chenopodium quinoa HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 65.8
Oeu015074.1 Olea europaea HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 65.8
SGA_v2.0_scaffold2G01349 Striga asiatica HOM05D002736 ORTHO05D003882 4.7e-65 251.5 190 65.8
A09p65400 Brassica napus HOM05D002736 ORTHO05D003882 6.1e-65 251.1 190 62.6
CAN.G533.4 Capsicum annuum HOM05D002736 ORTHO05D003882 6.1e-65 251.1 190 65.3
CAN.G1222.4 Capsicum annuum HOM05D002736 ORTHO05D003882 1.4e-64 250.0 190 65.8
Lj4C21T0 Lonicera japonica HOM05D002736 ORTHO05D003882 2.3e-64 249.2 190 63.2
Rhsim12G0004200 Rhododendron simsii HOM05D002736 ORTHO05D003882 2.3e-64 249.2 190 62.1
vmacro00845 Vaccinium macrocarpon HOM05D002736 ORTHO05D003882 2.3e-64 249.2 190 61.6
vmacro00925 Vaccinium macrocarpon HOM05D002736 ORTHO05D003882 2.3e-64 249.2 190 61.6
Thhalv10028099m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 3.0e-64 248.8 190 63.7
Actinidia29978 Actinidia chinensis HOM05D002736 ORTHO05D003882 4.0e-64 248.4 190 62.1
Lj7P691T6 Lonicera japonica HOM05D002736 ORTHO05D003882 4.0e-64 248.4 190 63.2
MSTRG.8129 Avicennia marina HOM05D002736 ORTHO05D003882 5.2e-64 248.1 190 64.2
Rhsim12G0137900 Rhododendron simsii HOM05D002736 ORTHO05D003882 8.8e-64 247.3 190 61.6
HanXRQChr12g0378191 Helianthus annuus HOM05D002736 ORTHO05D003882 1.2e-63 246.9 190 64.2
ECA246G0320 Erigeron canadensis HOM05D002736 ORTHO05D003882 1.5e-63 246.5 190 62.6
HPP92_001141 Vanilla planifolia HOM05D002736 ORTHO05D003882 1.5e-63 246.5 190 62.6
Migut.F01705 Erythranthe guttata HOM05D002736 ORTHO05D003882 2.0e-63 246.1 189 64.0
CSS0003972 Camellia sinensis var. sinensis HOM05D002736 ORTHO05D003882 3.4e-63 245.4 190 62.1
Thhalv10009411m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 4.4e-63 245.0 190 65.3
Lsat_1_v5_gn_5_36420 Lactuca sativa HOM05D002736 ORTHO05D003882 5.7e-63 244.6 190 63.7
HanXRQChr11g0338201 Helianthus annuus HOM05D002736 ORTHO05D003882 9.8e-63 243.8 190 62.6
Peaxi162Scf00016g00195 Petunia axillaris HOM05D002736 ORTHO05D003882 1.7e-62 243.0 190 62.1
Pp3c1_8450 Physcomitrium patens HOM05D002736 ORTHO05D003882 1.7e-62 243.0 189 61.9
Pp3c1_8463 Physcomitrium patens HOM05D002736 ORTHO05D003882 1.7e-62 243.0 189 61.9
DCAR_004333 Daucus carota HOM05D002736 ORTHO05D003882 1.1e-61 240.4 189 60.8
CBR_g949 Chara braunii HOM05D002736 ORTHO05D003882 9.2e-61 237.3 190 61.1
unitig_736.g22329 Utricularia gibba HOM05D002736 ORTHO05D003882 2.7e-60 235.7 190 60.0
SMO116G0053 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 3.5e-60 235.3 189 60.3
SMO269G0046 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 3.5e-60 235.3 189 60.3
unitig_899.g15041 Utricularia gibba HOM05D002736 ORTHO05D003882 3.5e-60 235.3 190 60.0
SMO364G0771 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 1.7e-59 233.0 189 59.8
RcHm_v2.0_Chr4g0443201 Rosa chinensis HOM05D002736 ORTHO05D003882 1.2e-57 226.9 190 58.9
Solyc02g069140.3 Solanum lycopersicum HOM05D002736 ORTHO05D003882 1.5e-55 219.9 190 60.0
Rhsim04G0223200 Rhododendron simsii HOM05D002736 ORTHO05D003882 1.3e-54 216.9 189 58.2
Rhsim09G0006800 Rhododendron simsii HOM05D002736 ORTHO05D003882 1.3e-54 216.9 189 58.2
Prupe.2G015100 Prunus persica HOM05D002736 ORTHO05D003882 2.9e-54 215.7 181 61.3
MCO07G647 Micromonas commoda HOM05D002736 ORTHO05D003882 1.6e-52 209.9 189 55.0
PRCOL_00005770 Prasinoderma coloniale HOM05D002736 ORTHO05D003882 1.5e-50 203.4 194 52.6
GSVIVG01023222001 Vitis vinifera HOM05D002736 ORTHO05D003882 6.8e-48 194.5 149 62.4
CSS0035217 Camellia sinensis var. sinensis HOM05D002736 ORTHO05D003882 1.7e-46 189.9 190 52.1
GSVIVG01036435001 Vitis vinifera HOM05D002736 ORTHO05D003882 4.1e-45 185.3 190 53.2
ECA236G3591 Erigeron canadensis HOM05D002736 ORTHO05D003882 2.3e-43 179.5 121 68.6
RcHm_v2.0_Chr1g0353811 Rosa chinensis HOM05D002736 ORTHO05D003882 3.3e-42 175.6 191 48.7
PSO732G0021 Papaver somniferum HOM05D002736 ORTHO05D003882 6.2e-41 171.4 182 51.6
Medtr3g058540 Medicago truncatula HOM05D002736 ORTHO05D003882 1.1e-40 170.6 126 69.8
Thecc.09G271800 Theobroma cacao HOM05D002736 ORTHO05D003882 5.2e-32 141.7 189 41.8
Prupe.4G275400 Prunus persica HOM05D002736 ORTHO05D336304 1.2e-25 120.6 130 51.5
Migut.F01948 Erythranthe guttata HOM05D002736 ORTHO05D003882 8.1e-25 117.9 175 40.0
BcaC07g38524 Brassica carinata HOM05D002736 ORTHO05D003882 7.6e-23 111.3 101 55.4
Medtr3g058530 Medicago truncatula HOM05D002736 ORTHO05D003882 1.3e-19 100.5 51 84.3
Actinidia38525 Actinidia chinensis HOM05D002736 ORTHO05D003882 4.5e-15 85.5 163 33.1
C08p13070 Brassica napus HOM05D002736 ORTHO05D003882 2.2e-14 83.2 124 41.1
Haze_26736 Corylus avellana HOM05D002736 ORTHO05D003882 1.6e-09 67.0 65 44.6


User provided reference genes

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