Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0275471 Lupinus albus HOM05D002736 ORTHO05D000439 3.4e-43 177.9 91 100.0
Lalb_Chr09g0324331 Lupinus albus HOM05D002736 ORTHO05D003882 6.0e-32 140.6 72 98.6
Lalb_Chr16g0379531 Lupinus albus HOM05D002736 ORTHO05D003882 2.6e-27 125.2 72 88.9
ClCG03G002180 Citrullus lanatus HOM05D002736 ORTHO05D003882 3.7e-21 104.8 78 71.8
MD08G1244600 Malus domestica HOM05D002736 ORTHO05D003882 8.2e-21 103.6 75 70.7
Sed0026141 Sechium edule HOM05D002736 ORTHO05D003882 2.4e-20 102.1 78 71.8
MELO3C005060.2 Cucumis melo HOM05D002736 ORTHO05D003882 3.1e-20 101.7 78 69.2
Hund03390 Selenicereus undatus HOM05D002736 ORTHO05D003882 3.1e-20 101.7 82 64.6
arahy.Tifrunner.gnm1.ann1.3AX6CG Arachis hypogaea HOM05D002736 ORTHO05D003882 5.3e-20 100.9 76 73.7
Lj1g0009096 Lotus japonicus HOM05D002736 ORTHO05D003882 6.9e-20 100.5 75 76.0
CsaV3_1G012830 Cucumis sativus L. HOM05D002736 ORTHO05D003882 9.0e-20 100.1 78 70.5
Potri.004G226700 Populus trichocarpa HOM05D002736 ORTHO05D003882 1.2e-19 99.8 75 69.3
TPR.G30745 Trifolium pratense HOM05D002736 ORTHO05D003882 1.5e-19 99.4 87 65.5
Eucgr.H01506 Eucalyptus grandis HOM05D002736 ORTHO05D003882 2.0e-19 99.0 78 69.2
Prupe.1G582000 Prunus persica HOM05D002736 ORTHO05D003882 2.0e-19 99.0 77 70.1
Sabra01G0172100 Salix brachista HOM05D002736 ORTHO05D003882 2.0e-19 99.0 75 68.0
Gohir.A11G237100 Gossypium hirsutum HOM05D002736 ORTHO05D003882 2.6e-19 98.6 78 66.7
Sed0009276 Sechium edule HOM05D002736 ORTHO05D003882 2.6e-19 98.6 78 67.9
Gohir.D11G247600 Gossypium hirsutum HOM05D002736 ORTHO05D003882 3.4e-19 98.2 78 66.7
Gorai.007G263900 Gossypium raimondii HOM05D002736 ORTHO05D003882 3.4e-19 98.2 78 66.7
Sc18g0002120 Simmondsia chinensis HOM05D002736 ORTHO05D003882 3.4e-19 98.2 78 65.4
Atru.chr6.461 Acer truncatum HOM05D002736 ORTHO05D003882 5.9e-19 97.4 76 71.1
VMungo1215G1077 Vigna mungo HOM05D002736 ORTHO05D003882 5.9e-19 97.4 79 64.6
Cpa.g.sc113.23 Carica papaya HOM05D002736 ORTHO05D003882 7.6e-19 97.1 78 66.7
Haze_03584 Corylus avellana HOM05D002736 ORTHO05D003882 7.6e-19 97.1 76 68.4
TWI74G0802 Tripterygium wilfordii HOM05D002736 ORTHO05D003882 7.6e-19 97.1 78 65.4
Rhsim12G0004200 Rhododendron simsii HOM05D002736 ORTHO05D003882 1.0e-18 96.7 79 69.6
Duzib154G0001 Durio zibethinus HOM05D002736 ORTHO05D003882 1.3e-18 96.3 78 65.4
Duzib177G0256 Durio zibethinus HOM05D002736 ORTHO05D003882 1.3e-18 96.3 78 65.4
Duzib177G0909 Durio zibethinus HOM05D002736 ORTHO05D003882 1.3e-18 96.3 78 65.4
Lj3g0011514 Lotus japonicus HOM05D002736 ORTHO05D003882 1.3e-18 96.3 73 74.0
COL.COLO4_36050 Corchorus olitorius HOM05D002736 ORTHO05D003882 1.7e-18 95.9 76 67.1
DCAR_004333 Daucus carota HOM05D002736 ORTHO05D003882 1.7e-18 95.9 75 68.0
MD15G1439400 Malus domestica HOM05D002736 ORTHO05D003882 1.7e-18 95.9 77 67.5
Phvul.002G085100 Phaseolus vulgaris HOM05D002736 ORTHO05D003882 1.7e-18 95.9 79 65.8
Actinidia29978 Actinidia chinensis HOM05D002736 ORTHO05D003882 2.2e-18 95.5 82 65.9
Aa31LG1G5380 Aethionema arabicum HOM05D002736 ORTHO05D003882 2.2e-18 95.5 72 72.2
Thecc.05G252500 Theobroma cacao HOM05D002736 ORTHO05D003882 2.2e-18 95.5 78 65.4
Medtr3g058540 Medicago truncatula HOM05D002736 ORTHO05D003882 2.9e-18 95.1 87 63.2
Rhsim12G0137900 Rhododendron simsii HOM05D002736 ORTHO05D003882 2.9e-18 95.1 82 68.3
Duzib177G1145 Durio zibethinus HOM05D002736 ORTHO05D003882 3.8e-18 94.7 78 65.4
vmacro00925 Vaccinium macrocarpon HOM05D002736 ORTHO05D003882 3.8e-18 94.7 79 67.1
A09p65400 Brassica napus HOM05D002736 ORTHO05D003882 5.0e-18 94.4 71 69.0
BraA09t41885Z Brassica rapa HOM05D002736 ORTHO05D003882 5.0e-18 94.4 71 69.0
THA.LOC104816828 Tarenaya hassleriana HOM05D002736 ORTHO05D003882 5.0e-18 94.4 78 65.4
Ca_20190_v3 Cicer arietinum L. HOM05D002736 ORTHO05D003882 6.5e-18 94.0 75 69.3
Duzib128G0674 Durio zibethinus HOM05D002736 ORTHO05D003882 6.5e-18 94.0 78 66.7
Sabra03G0002000 Salix brachista HOM05D002736 ORTHO05D003882 6.5e-18 94.0 76 65.8
SHI16267 Sapria himalayana HOM05D002736 ORTHO05D003882 6.5e-18 94.0 76 68.4
Hma1.2p1_1179F.1_g264530 Hydrangea macrophylla HOM05D002736 ORTHO05D003882 8.5e-18 93.6 76 65.8
Ah.01g021420 Amaranthus hybridus HOM05D002736 ORTHO05D003882 1.1e-17 93.2 78 65.4
Cfa010638 Carpinus fangiana HOM05D002736 ORTHO05D003882 1.1e-17 93.2 76 64.5
Ciclev10000088m.g Citrus clementina HOM05D002736 ORTHO05D003882 1.1e-17 93.2 79 69.6
Lj7P691T6 Lonicera japonica HOM05D002736 ORTHO05D003882 1.1e-17 93.2 76 67.1
CSS0035217 Camellia sinensis var. sinensis HOM05D002736 ORTHO05D003882 1.4e-17 92.8 78 67.9
CANSAT56G1406 Cannabis sativa HOM05D002736 ORTHO05D003882 1.4e-17 92.8 71 66.2
CARHR040170 Cardamine hirsuta HOM05D002736 ORTHO05D003882 1.4e-17 92.8 71 67.6
Manes.07G026300 Manihot esculenta HOM05D002736 ORTHO05D003882 1.4e-17 92.8 76 67.1
AUR62007554 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.9e-17 92.4 166 39.2
QL12p006954 Quercus lobata HOM05D002736 ORTHO05D003882 1.9e-17 92.4 76 67.1
ATR1120G086 Amborella trichopoda HOM05D002736 ORTHO05D003882 2.5e-17 92.0 80 62.5
CSS0003972 Camellia sinensis var. sinensis HOM05D002736 ORTHO05D003882 2.5e-17 92.0 79 64.6
Hma1.2p1_0207F.1_g087750 Hydrangea macrophylla HOM05D002736 ORTHO05D003882 2.5e-17 92.0 76 64.5
THA.LOC104823704 Tarenaya hassleriana HOM05D002736 ORTHO05D003882 2.5e-17 92.0 74 67.6
vmacro00845 Vaccinium macrocarpon HOM05D002736 ORTHO05D003882 2.5e-17 92.0 76 65.8
Atru.chr8.1477 Acer truncatum HOM05D002736 ORTHO05D003882 3.2e-17 91.7 73 67.1
FAN26G2788 Fragaria x ananassa HOM05D002736 ORTHO05D003882 3.2e-17 91.7 76 67.1
Lsat_1_v5_gn_5_36420 Lactuca sativa HOM05D002736 ORTHO05D003882 3.2e-17 91.7 78 64.1
Sed0008782 Sechium edule HOM05D002736 ORTHO05D003882 3.2e-17 91.7 78 65.4
AL1G20150 Arabidopsis lyrata HOM05D002736 ORTHO05D003882 4.2e-17 91.3 71 67.6
Thhalv10006633m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 4.2e-17 91.3 76 64.5
Glyma.11G034100 Glycine max HOM05D002736 ORTHO05D003882 4.2e-17 91.3 86 60.5
Psat5g170080 Pisum sativum HOM05D002736 ORTHO05D003882 5.5e-17 90.9 81 63.0
QL12p006975 Quercus lobata HOM05D002736 ORTHO05D000439 5.5e-17 90.9 76 65.8
arahy.Tifrunner.gnm1.ann1.SQPQ35 Arachis hypogaea HOM05D002736 ORTHO05D003882 7.2e-17 90.5 76 68.4
C05p07670 Brassica napus HOM05D002736 ORTHO05D003882 7.2e-17 90.5 72 66.7
BolC5t29518H Brassica oleracea HOM05D002736 ORTHO05D003882 7.2e-17 90.5 72 66.7
Dinv29610 Davidia involucrata HOM05D002736 ORTHO05D003882 7.2e-17 90.5 78 62.8
FAN28G0165 Fragaria x ananassa HOM05D002736 ORTHO05D003882 7.2e-17 90.5 76 65.8
Sp1g08230 Schrenkiella parvula HOM05D002736 ORTHO05D003882 7.2e-17 90.5 71 66.2
Carub.0001s3928 Capsella rubella HOM05D002736 ORTHO05D003882 9.3e-17 90.1 73 67.1
COL.COLO4_12093 Corchorus olitorius HOM05D002736 ORTHO05D003882 1.2e-16 89.7 79 64.6
Medtr7g006450 Medicago truncatula HOM05D002736 ORTHO05D003882 1.2e-16 89.7 76 63.2
CARHR189180 Cardamine hirsuta HOM05D002736 ORTHO05D003882 1.6e-16 89.4 71 66.2
Potri.003G003900 Populus trichocarpa HOM05D002736 ORTHO05D003882 1.6e-16 89.4 76 63.2
C08p49360 Brassica napus HOM05D002736 ORTHO05D003882 2.1e-16 89.0 72 66.7
BolC8t52473H Brassica oleracea HOM05D002736 ORTHO05D003882 2.1e-16 89.0 72 66.7
EL10Ac1g00169 Beta vulgaris HOM05D002736 ORTHO05D003882 2.7e-16 88.6 74 63.5
Ah.11g041020 Amaranthus hybridus HOM05D002736 ORTHO05D003882 3.6e-16 88.2 78 61.5
CDE04G0595 Ceratophyllum demersum HOM05D002736 ORTHO05D003882 3.6e-16 88.2 76 65.8
FvH4_1g25930 Fragaria vesca HOM05D002736 ORTHO05D003882 4.6e-16 87.8 76 64.5
FAN19G2929 Fragaria x ananassa HOM05D002736 ORTHO05D003882 4.6e-16 87.8 76 64.5
Lj4C21T0 Lonicera japonica HOM05D002736 ORTHO05D003882 4.6e-16 87.8 76 63.2
CDE12G0193 Ceratophyllum demersum HOM05D002736 ORTHO05D003882 6.1e-16 87.4 83 62.7
Manes.10G115700 Manihot esculenta HOM05D002736 ORTHO05D003882 6.1e-16 87.4 76 64.5
PSO063G4363 Papaver somniferum HOM05D002736 ORTHO05D003882 6.1e-16 87.4 81 56.8
PGR042G0883 Punica granatum HOM05D002736 ORTHO05D003882 7.9e-16 87.0 78 64.1
CiPaw.05G003300 Carya illinoinensis HOM05D002736 ORTHO05D003882 1.0e-15 86.7 78 61.5
MBI06_g06679_MAGBIO Magnolia biondii HOM05D002736 ORTHO05D003882 1.0e-15 86.7 80 57.5
Nn7g37033 Nelumbo nucifera HOM05D002736 ORTHO05D003882 1.0e-15 86.7 79 59.5
Carub.0001s0897 Capsella rubella HOM05D002736 ORTHO05D003882 1.4e-15 86.3 73 64.4
Haze_10026 Corylus avellana HOM05D002736 ORTHO05D003882 1.4e-15 86.3 72 63.9
HanXRQChr12g0378191 Helianthus annuus HOM05D002736 ORTHO05D003882 1.4e-15 86.3 80 60.0
Aqoxy2G02985 Aquilegia oxysepala HOM05D002736 ORTHO05D003882 1.8e-15 85.9 75 60.0
PGSC0003DMG400013102 Solanum tuberosum HOM05D002736 ORTHO05D003882 1.8e-15 85.9 77 63.6
CAN.G533.4 Capsicum annuum HOM05D002736 ORTHO05D003882 2.3e-15 85.5 78 62.8
ECA246G0320 Erigeron canadensis HOM05D002736 ORTHO05D003882 2.3e-15 85.5 83 56.6
RcHm_v2.0_Chr1g0373331 Rosa chinensis HOM05D002736 ORTHO05D003882 3.0e-15 85.1 77 64.9
MBI18_g35650_MAGBIO Magnolia biondii HOM05D002736 ORTHO05D003882 3.9e-15 84.7 80 57.5
Solyc02g065300.1 Solanum lycopersicum HOM05D002736 ORTHO05D003882 5.1e-15 84.3 77 63.6
TAR636G0400 Trochodendron aralioides HOM05D002736 ORTHO05D003882 6.7e-15 84.0 78 61.5
HanXRQChr11g0338201 Helianthus annuus HOM05D002736 ORTHO05D003882 8.8e-15 83.6 81 61.7
Sopen02g015450 Solanum pennellii HOM05D002736 ORTHO05D003882 8.8e-15 83.6 77 63.6
Glyma.01G208100 Glycine max HOM05D002736 ORTHO05D003882 1.1e-14 83.2 84 58.3
Lj6g0005327 Lotus japonicus HOM05D002736 ORTHO05D003882 1.1e-14 83.2 72 65.3
Peaxi162Scf00016g00195 Petunia axillaris HOM05D002736 ORTHO05D003882 1.1e-14 83.2 78 62.8
SGA_v2.0_scaffold2G01349 Striga asiatica HOM05D002736 ORTHO05D003882 1.1e-14 83.2 76 61.8
AT1G09620 Arabidopsis thaliana HOM05D002736 ORTHO05D003882 1.5e-14 82.8 73 63.0
AUR62042448 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.5e-14 82.8 78 60.3
AUR62044762 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.5e-14 82.8 78 60.3
Cc03_g11150 Coffea canephora HOM05D002736 ORTHO05D003882 1.5e-14 82.8 75 65.3
Thhalv10027096m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 1.5e-14 82.8 70 64.3
RcHm_v2.0_Chr1g0336121 Rosa chinensis HOM05D002736 ORTHO05D003882 1.5e-14 82.8 78 61.5
TAR381G0578 Trochodendron aralioides HOM05D002736 ORTHO05D003882 1.9e-14 82.4 78 60.3
MSTRG.392 Avicennia marina HOM05D002736 ORTHO05D003882 2.5e-14 82.0 80 63.8
TAR624G1351 Trochodendron aralioides HOM05D002736 ORTHO05D003882 2.5e-14 82.0 81 59.3
HPP92_001141 Vanilla planifolia HOM05D002736 ORTHO05D003882 2.5e-14 82.0 74 62.2
EL10Ac1g01012 Beta vulgaris HOM05D002736 ORTHO05D003882 3.3e-14 81.6 74 59.5
Nitab4.5_0008538g0020 Nicotiana tabacum HOM05D002736 ORTHO05D003882 3.3e-14 81.6 78 61.5
Nitab4.5_0012056g0010 Nicotiana tabacum HOM05D002736 ORTHO05D003882 3.3e-14 81.6 78 61.5
MSTRG.8129 Avicennia marina HOM05D002736 ORTHO05D003882 4.3e-14 81.3 76 64.5
Oeu046641.1 Olea europaea HOM05D002736 ORTHO05D003882 4.3e-14 81.3 79 60.8
Nitab4.5_0000020g0270 Nicotiana tabacum HOM05D002736 ORTHO05D003882 7.4e-14 80.5 78 59.0
AUR62034823 Chenopodium quinoa HOM05D002736 ORTHO05D003882 1.3e-13 79.7 78 57.7
CAN.G1222.4 Capsicum annuum HOM05D002736 ORTHO05D003882 2.2e-13 79.0 73 64.4
AUR62033656 Chenopodium quinoa HOM05D002736 ORTHO05D003882 2.2e-13 79.0 78 57.7
QL12p006967 Quercus lobata HOM05D002736 ORTHO05D003882 2.2e-13 79.0 75 60.0
Thhalv10009411m.g Eutrema salsugineum HOM05D002736 ORTHO05D003882 2.8e-13 78.6 71 63.4
AUR62029614 Chenopodium quinoa HOM05D002736 ORTHO05D003882 3.7e-13 78.2 78 56.4
Zm00001eb097790 Zea mays HOM05D002736 ORTHO05D003882 3.7e-13 78.2 74 62.2
Solyc02g069140.3 Solanum lycopersicum HOM05D002736 ORTHO05D003882 6.3e-13 77.4 78 59.0
Sopen02g018270 Solanum pennellii HOM05D002736 ORTHO05D003882 6.3e-13 77.4 78 59.0
SalBow1G4786 Salvia bowleyana HOM05D002736 ORTHO05D003882 8.2e-13 77.0 76 61.8
SalBow6G6103 Salvia bowleyana HOM05D002736 ORTHO05D003882 8.2e-13 77.0 76 61.8
Zm00001eb067180 Zea mays HOM05D002736 ORTHO05D003882 8.2e-13 77.0 74 62.2
PGSC0003DMG400010338 Solanum tuberosum HOM05D002736 ORTHO05D003882 1.1e-12 76.6 78 59.0
Thecc.09G271800 Theobroma cacao HOM05D002736 ORTHO05D003882 1.1e-12 76.6 167 34.7
Migut.F01705 Erythranthe guttata HOM05D002736 ORTHO05D003882 1.8e-12 75.9 85 52.9
Os09g0378300 Oryza sativa ssp. japonica HOM05D002736 ORTHO05D003882 5.3e-12 74.3 77 58.4
Os09g0503400 Oryza sativa ssp. japonica HOM05D002736 ORTHO05D003882 5.3e-12 74.3 78 53.8
Mapoly0153s0002 Marchantia polymorpha HOM05D002736 ORTHO05D003882 9.1e-12 73.6 76 55.3
unitig_736.g22329 Utricularia gibba HOM05D002736 ORTHO05D003882 1.2e-11 73.2 73 56.2
RcHm_v2.0_Chr1g0353811 Rosa chinensis HOM05D002736 ORTHO05D003882 1.5e-11 72.8 73 56.2
Oeu015074.1 Olea europaea HOM05D002736 ORTHO05D003882 2.0e-11 72.4 75 57.3
Prupe.2G123100 Prunus persica HOM05D002736 ORTHO05D014287 4.5e-11 71.2 65 60.0
SEGI_07104 Sequoiadendron giganteum HOM05D002736 ORTHO05D003882 5.9e-11 70.9 81 48.1
Pp3c1_8450 Physcomitrium patens HOM05D002736 ORTHO05D003882 7.7e-11 70.5 83 49.4
Pp3c1_8463 Physcomitrium patens HOM05D002736 ORTHO05D003882 7.7e-11 70.5 83 49.4
Os05g0241100 Oryza sativa ssp. japonica HOM05D002736 ORTHO05D003882 5.0e-10 67.8 78 50.0
SMO116G0053 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 5.0e-10 67.8 81 53.1
SMO269G0046 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 5.0e-10 67.8 81 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2691 Anthoceros agrestis HOM05D002736 ORTHO05D003882 6.5e-10 67.4 78 51.3
BcaC07g38524 Brassica carinata HOM05D002736 ORTHO05D003882 1.1e-09 66.6 73 54.8
CBR_g949 Chara braunii HOM05D002736 ORTHO05D003882 1.1e-09 66.6 89 48.3
SMO364G0771 Selaginella moellendorffii HOM05D002736 ORTHO05D003882 1.4e-09 66.2 74 54.1
MCO07G647 Micromonas commoda HOM05D002736 ORTHO05D003882 1.9e-09 65.9 87 47.1
unitig_899.g15041 Utricularia gibba HOM05D002736 ORTHO05D003882 2.5e-09 65.5 75 50.7
SEGI_37954 Sequoiadendron giganteum HOM05D002736 ORTHO05D003882 5.5e-09 64.3 75 50.7
Rhsim04G0223200 Rhododendron simsii HOM05D002736 ORTHO05D003882 7.2e-09 63.9 72 55.6
Rhsim09G0006800 Rhododendron simsii HOM05D002736 ORTHO05D003882 7.2e-09 63.9 72 55.6
PRCOL_00005770 Prasinoderma coloniale HOM05D002736 ORTHO05D003882 6.1e-08 60.8 78 47.4
Haze_26736 Corylus avellana HOM05D002736 ORTHO05D003882 7.9e-08 60.5 70 52.9
AUR62034730 Chenopodium quinoa HOM05D002736 ORTHO05D003882 2.6e-06 55.5 72 45.8
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 3.3e-06 55.1 59 50.8
Lj2g0020826 Lotus japonicus HOM05D002736 ORTHO05D003882 9.7e-06 53.5 72 51.4


User provided reference genes

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