Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 0.0e+00 1139.0 584 100.0
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.3e-90 338.2 621 43.8
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 5.3e-89 332.8 621 43.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 3.7e-50 203.8 579 33.9
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 5.4e-49 199.9 584 35.3
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 9.2e-49 199.1 607 33.4
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 3.5e-48 197.2 598 35.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 1.4e-44 185.3 576 33.9
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.1e-44 184.1 577 34.5
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 5.2e-44 183.3 616 31.8
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 4.6e-40 170.2 602 32.4
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.5e-38 164.5 415 34.7
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.3e-38 164.1 644 29.5
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.2e-37 162.2 629 30.0
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.2e-34 151.4 578 31.1
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 5.4e-33 146.7 618 29.1
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.2e-32 145.6 612 29.1
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 3.5e-32 144.1 635 30.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 3.9e-31 140.6 452 33.6
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.1e-31 140.2 452 33.0
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.9e-30 138.3 380 34.5
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 5.6e-30 136.7 362 34.5
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.2e-29 135.6 634 30.1
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 2.1e-29 134.8 607 27.3
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.7e-29 133.7 452 33.2
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 2.3e-28 131.3 433 33.3
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.0e-28 130.6 408 32.4
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 2.0e-27 128.3 600 28.2
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.0e-27 128.3 432 34.3
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 5.8e-27 126.7 636 26.9
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 2.2e-26 124.8 609 26.6
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.9e-25 121.7 411 33.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.1e-25 120.6 365 32.1
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.2e-24 119.0 352 34.9
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.3e-23 115.5 348 34.2
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.7e-23 115.2 391 30.9
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 5.1e-23 113.6 320 33.4
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.8e-21 107.8 583 25.4
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.6e-21 107.5 596 25.8
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.1e-20 105.9 629 28.3
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.1e-20 105.9 541 25.9
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 4.0e-20 104.0 388 29.9
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 4.0e-20 104.0 590 26.1
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 5.2e-20 103.6 419 30.5
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.2e-19 102.4 384 28.4
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.5e-19 102.1 585 28.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.5e-19 102.1 569 26.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.6e-19 101.3 324 31.5
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.4e-19 100.9 567 25.0
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 3.8e-18 97.4 426 28.6
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.8e-18 97.4 504 25.4
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 4.2e-17 94.0 546 26.7
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 5.4e-17 93.6 428 28.5
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.1e-17 93.2 586 24.9
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 9.3e-17 92.8 551 25.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.6e-16 92.0 543 27.1
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.7e-16 91.3 392 27.8
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 3.5e-16 90.9 329 30.1
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.5e-16 90.9 340 29.1
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 7.8e-16 89.7 331 31.7
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.0e-15 89.4 537 26.1
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.0e-15 89.4 482 26.8
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.7e-15 88.6 585 26.7
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 3.0e-15 87.8 540 26.3
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.9e-15 87.4 456 27.6
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 3.9e-15 87.4 442 27.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 5.1e-15 87.0 350 29.1
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 8.7e-15 86.3 381 30.2
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.5e-14 85.5 584 23.8
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 4.3e-14 84.0 539 25.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 9.6e-14 82.8 312 30.1
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.6e-13 82.0 327 26.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 2.1e-13 81.6 419 28.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.1e-13 81.6 509 25.3
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.8e-13 81.3 117 44.4
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 3.6e-13 80.9 342 28.9
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 4.8e-13 80.5 382 28.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.2e-13 80.1 625 25.0
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 8.1e-13 79.7 537 25.5
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.4e-12 79.0 640 25.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.1e-12 77.8 100 47.0
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.1e-12 77.8 194 35.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-11 75.5 531 27.3
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.0e-11 75.1 333 27.9
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.6e-11 74.7 500 25.4
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.6e-11 74.7 614 24.9
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 3.4e-11 74.3 526 26.8
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 4.4e-11 73.9 624 24.7
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.9e-09 68.6 319 25.1
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.9e-09 68.6 349 27.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 2.4e-09 68.2 339 26.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 9.3e-09 66.2 349 26.4
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 4.6e-08 63.9 96 41.7
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.7e-07 62.0 281 24.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 6.6e-07 60.1 352 25.0
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.5e-06 58.9 339 27.1
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 1.9e-06 58.5 77 46.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.9e-06 58.5 77 46.8
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.9e-06 58.5 77 46.8
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 4.3e-06 57.4 57 54.4
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 4.3e-06 57.4 78 46.2
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 4.3e-06 57.4 645 23.9
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.6e-06 57.0 73 43.8


User provided reference genes

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