Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0269661 Lupinus albus HOM05D007429 ORTHO05D003505 1.6e-40 169.1 93 100.0
Lj1g0025254 Lotus japonicus HOM05D007429 ORTHO05D003505 5.4e-20 100.9 86 68.6
Duzib187G1405 Durio zibethinus HOM05D007429 ORTHO05D003505 7.1e-20 100.5 86 66.3
Gohir.A05G046400 Gossypium hirsutum HOM05D007429 ORTHO05D003505 1.6e-19 99.4 93 61.3
Duzib168G1390 Durio zibethinus HOM05D007429 ORTHO05D003505 2.1e-19 99.0 93 61.3
Ciclev10010039m.g Citrus clementina HOM05D007429 ORTHO05D003505 1.3e-18 96.3 93 61.3
GSVIVG01035615001 Vitis vinifera HOM05D007429 ORTHO05D003505 1.3e-18 96.3 93 60.2
Medtr3g109720 Medicago truncatula HOM05D007429 ORTHO05D003505 2.3e-18 95.5 86 64.0
Thecc.09G045900 Theobroma cacao HOM05D007429 ORTHO05D003505 5.1e-18 94.4 86 62.8
Thhalv10015136m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 6.6e-18 94.0 93 61.3
TPR.G15111 Trifolium pratense HOM05D007429 ORTHO05D003505 1.1e-17 93.2 86 66.3
CANSAT25G2095 Cannabis sativa HOM05D007429 ORTHO05D003505 1.5e-17 92.8 93 60.2
CiPaw.07G203700 Carya illinoinensis HOM05D007429 ORTHO05D003505 2.5e-17 92.0 94 59.6
PGR031G3761 Punica granatum HOM05D007429 ORTHO05D003505 2.5e-17 92.0 93 60.2
Prupe.1G447500 Prunus persica HOM05D007429 ORTHO05D003505 3.3e-17 91.7 93 61.3
TWI63G1379 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 5.6e-17 90.9 93 59.1
Gorai.009G049400 Gossypium raimondii HOM05D007429 ORTHO05D003505 9.6e-17 90.1 86 60.5
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 1.2e-16 89.7 93 58.1
CiPaw.08G026200 Carya illinoinensis HOM05D007429 ORTHO05D003505 1.6e-16 89.4 87 60.9
Dinv23374 Davidia involucrata HOM05D007429 ORTHO05D003505 1.6e-16 89.4 86 60.5
FvH4_2g35460 Fragaria vesca HOM05D007429 ORTHO05D003505 2.1e-16 89.0 93 57.0
PSO173G0075 Papaver somniferum HOM05D007429 ORTHO05D003505 2.1e-16 89.0 93 57.0
PSO824G0083 Papaver somniferum HOM05D007429 ORTHO05D003505 4.7e-16 87.8 93 55.9
CARHR201590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 6.2e-16 87.4 93 57.0
MELO3C003465.2 Cucumis melo HOM05D007429 ORTHO05D003505 8.1e-16 87.0 86 64.0
Glyma.04G084800 Glycine max HOM05D007429 ORTHO05D003505 8.1e-16 87.0 86 64.0
Gohir.D05G048100 Gossypium hirsutum HOM05D007429 ORTHO05D003505 8.1e-16 87.0 84 59.5
Atru.chr7.2081 Acer truncatum HOM05D007429 ORTHO05D003505 1.1e-15 86.7 87 58.6
arahy.Tifrunner.gnm1.ann1.ZH3G1A Arachis hypogaea HOM05D007429 ORTHO05D003505 1.8e-15 85.9 111 50.5
Glyma.06G086300 Glycine max HOM05D007429 ORTHO05D003505 1.8e-15 85.9 86 62.8
Actinidia13337 Actinidia chinensis HOM05D007429 ORTHO05D003505 2.4e-15 85.5 87 57.5
ClCG11G015140 Citrullus lanatus HOM05D007429 ORTHO05D003505 5.2e-15 84.3 86 61.6
EL10Ac2g04004 Beta vulgaris HOM05D007429 ORTHO05D003505 6.8e-15 84.0 86 58.1
Gohir.A08G249800 Gossypium hirsutum HOM05D007429 ORTHO05D003505 6.8e-15 84.0 84 54.8
Nn8g39115 Nelumbo nucifera HOM05D007429 ORTHO05D003505 6.8e-15 84.0 91 56.0
Potri.006G237800 Populus trichocarpa HOM05D007429 ORTHO05D003505 6.8e-15 84.0 86 58.1
AUR62042440 Chenopodium quinoa HOM05D007429 ORTHO05D003505 1.5e-14 82.8 86 57.0
Gohir.D08G270600 Gossypium hirsutum HOM05D007429 ORTHO05D003505 1.5e-14 82.8 86 53.5
CSS0002972 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 2.0e-14 82.4 86 57.0
Cfa013372 Carpinus fangiana HOM05D007429 ORTHO05D003505 2.0e-14 82.4 87 58.6
Sed0003359 Sechium edule HOM05D007429 ORTHO05D003505 2.0e-14 82.4 93 52.7
CsaV3_3G048540 Cucumis sativus L. HOM05D007429 ORTHO05D003505 2.6e-14 82.0 86 60.5
Dinv27908 Davidia involucrata HOM05D007429 ORTHO05D003505 2.6e-14 82.0 86 55.8
Sabra06G0186000 Salix brachista HOM05D007429 ORTHO05D003505 2.6e-14 82.0 86 57.0
AUR62009266 Chenopodium quinoa HOM05D007429 ORTHO05D003505 4.4e-14 81.3 86 55.8
Cc08_g09700 Coffea canephora HOM05D007429 ORTHO05D003505 4.4e-14 81.3 93 50.5
Sabra06G0186100 Salix brachista HOM05D008609 ORTHO05D010987 7.6e-14 80.5 86 57.0
Sp6g31990 Schrenkiella parvula HOM05D007429 ORTHO05D003505 7.6e-14 80.5 86 58.1
MD08G1113300 Malus domestica HOM05D007429 ORTHO05D003505 9.9e-14 80.1 86 57.0
Actinidia14679 Actinidia chinensis HOM05D007429 ORTHO05D003505 1.3e-13 79.7 86 54.7
Gorai.004G288500 Gossypium raimondii HOM05D007429 ORTHO05D003505 1.7e-13 79.3 78 55.1
MD15G1092600 Malus domestica HOM05D007429 ORTHO05D003505 1.7e-13 79.3 84 58.3
Phvul.009G110300 Phaseolus vulgaris HOM05D007429 ORTHO05D003505 2.2e-13 79.0 86 58.1
BcaC03g13383 Brassica carinata HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
A02p01120 Brassica napus HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
A10p26140 Brassica napus HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
C02p05300 Brassica napus HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
BolC2t06478H Brassica oleracea HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
BraA02t05091Z Brassica rapa HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
BraA10t44673Z Brassica rapa HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 57.0
Carub.0006s1011 Capsella rubella HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 55.8
Sopen08g020350 Solanum pennellii HOM05D007429 ORTHO05D003505 3.8e-13 78.2 86 54.7
BcaB08g37037 Brassica carinata HOM05D007429 ORTHO05D003505 6.4e-13 77.4 86 57.0
Manes.16G075000 Manihot esculenta HOM05D007429 ORTHO05D003505 8.4e-13 77.0 86 55.8
Solyc08g066520.3 Solanum lycopersicum HOM05D007429 ORTHO05D003505 8.4e-13 77.0 86 53.5
THA.LOC104811265 Tarenaya hassleriana HOM05D007429 ORTHO05D003505 8.4e-13 77.0 86 58.1
AL6G22340 Arabidopsis lyrata HOM05D007429 ORTHO05D003505 1.1e-12 76.6 86 55.8
PGSC0003DMG402029142 Solanum tuberosum HOM05D007429 ORTHO05D003505 1.1e-12 76.6 86 53.5
AT5G11630 Arabidopsis thaliana HOM05D007429 ORTHO05D003505 1.4e-12 76.3 86 55.8
RcHm_v2.0_Chr6g0306421 Rosa chinensis HOM05D007429 ORTHO05D003505 1.4e-12 76.3 84 56.0
BcaC04g19209 Brassica carinata HOM05D007429 ORTHO05D003505 1.9e-12 75.9 86 55.8
BolC9t59348H Brassica oleracea HOM05D007429 ORTHO05D003505 1.9e-12 75.9 86 55.8
Eucgr.C00555 Eucalyptus grandis HOM05D007429 ORTHO05D003505 1.9e-12 75.9 86 54.7
Eucgr.C00601 Eucalyptus grandis HOM05D007429 ORTHO05D003505 1.9e-12 75.9 86 54.7
Aa31LG3G15560 Aethionema arabicum HOM05D007429 ORTHO05D003505 2.4e-12 75.5 86 57.0
C09p65190 Brassica napus HOM05D007429 ORTHO05D003505 2.4e-12 75.5 86 55.8
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 2.4e-12 75.5 84 54.8
Lsat_1_v5_gn_6_22640 Lactuca sativa HOM05D007429 ORTHO05D003505 5.4e-12 74.3 86 53.5
arahy.Tifrunner.gnm1.ann1.R0MHDP Arachis hypogaea HOM05D007429 ORTHO05D003505 7.1e-12 73.9 111 45.9
CSS0037511 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 7.1e-12 73.9 91 52.7
Hund19504 Selenicereus undatus HOM05D007429 ORTHO05D003505 2.1e-11 72.4 86 54.7
Oeu030718.1 Olea europaea HOM05D007429 ORTHO05D003505 3.5e-11 71.6 87 50.6
HanXRQChr02g0050601 Helianthus annuus HOM05D007429 ORTHO05D003505 6.0e-11 70.9 86 47.7
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.7e-10 69.3 78 53.8
Lalb_Chr08g0243031 Lupinus albus HOM05D007429 ORTHO05D003505 2.3e-10 68.9 46 80.4
CDE02G4418 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 5.1e-10 67.8 86 50.0
Thhalv10005203m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 6.6e-10 67.4 91 51.6
CDE04G0746 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 1.1e-09 66.6 86 48.8
Ca_15587_v3 Cicer arietinum L. HOM05D002792 ORTHO05D003039 1.1e-09 66.6 82 52.4
Sc09g0009340 Simmondsia chinensis HOM05D007429 ORTHO05D003505 1.1e-09 66.6 86 46.5
CARHR187590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 3.3e-09 65.1 91 50.5
PGR031G2035 Punica granatum HOM05D006762 ORTHO05D003505 3.3e-09 65.1 92 44.6
AT4G17310 Arabidopsis thaliana HOM05D006762 ORTHO05D003505 4.3e-09 64.7 49 67.3
Carub.0008s0032 Capsella rubella HOM05D006762 ORTHO05D003505 5.6e-09 64.3 78 52.6
ECA233G1441 Erigeron canadensis HOM05D007429 ORTHO05D003505 5.6e-09 64.3 86 46.5
Aqoxy7G01463 Aquilegia oxysepala HOM05D007429 ORTHO05D003505 7.3e-09 63.9 86 47.7
Carub.0007s2409 Capsella rubella HOM05D006762 ORTHO05D003505 9.6e-09 63.5 75 53.3
Manes.07G073601 Manihot esculenta HOM05D007429 ORTHO05D003505 1.6e-08 62.8 78 51.3
CARHR173910 Cardamine hirsuta HOM05D006762 ORTHO05D003505 2.1e-08 62.4 102 46.1
FvH4_5g19060 Fragaria vesca HOM05D006762 ORTHO05D003505 2.8e-08 62.0 52 63.5
TWI34G0747 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 2.8e-08 62.0 86 51.2
CiPaw.12G051800 Carya illinoinensis HOM05D006762 ORTHO05D003505 3.6e-08 61.6 92 45.7
Glyma.17G142500 Glycine max HOM05D006762 ORTHO05D003505 3.6e-08 61.6 74 50.0
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 1.4e-07 59.7 42 71.4
Cfa013373 Carpinus fangiana HOM05D007429 ORTHO05D003505 1.8e-07 59.3 42 73.8
Glyma.05G060100 Glycine max HOM05D006762 ORTHO05D003505 1.8e-07 59.3 80 47.5
Prupe.5G068300 Prunus persica HOM05D006762 ORTHO05D003505 1.8e-07 59.3 92 45.7
Sopen08g027040 Solanum pennellii HOM05D006762 ORTHO05D003505 2.4e-07 58.9 97 41.2
VMungo1309G0862 Vigna mungo HOM05D007429 ORTHO05D003505 2.4e-07 58.9 38 78.9
Hund14549 Selenicereus undatus HOM05D006762 ORTHO05D003505 2.0e-06 55.8 92 41.3
Thecc.03G250100 Theobroma cacao HOM05D006762 ORTHO05D003505 2.0e-06 55.8 93 39.8
ATR0317G117 Amborella trichopoda HOM05D006762 ORTHO05D003505 3.4e-06 55.1 102 40.2
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 3.4e-06 55.1 53 56.6
arahy.Tifrunner.gnm1.ann1.QV68FE Arachis hypogaea HOM05D007429 ORTHO05D003505 4.4e-06 54.7 79 48.1
BolC7t43652H Brassica oleracea HOM05D006762 ORTHO05D003505 7.6e-06 53.9 41 63.4
BraA06t27376Z Brassica rapa HOM05D006762 ORTHO05D003505 7.6e-06 53.9 41 63.4
TAR629G0824 Trochodendron aralioides HOM05D006762 ORTHO05D003505 7.6e-06 53.9 92 44.6
Migut.E01531 Erythranthe guttata HOM05D007429 ORTHO05D003505 9.9e-06 53.5 86 43.0
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 9.9e-06 53.5 88 40.9


User provided reference genes

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