Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 9.5e-51 203.4 114 100.0
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 9.9e-24 113.6 119 52.9
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 2.2e-23 112.5 114 54.4
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 6.0e-21 104.4 118 57.6
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 6.6e-20 100.9 119 56.3
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 1.5e-19 99.8 141 41.1
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.5e-19 99.8 93 64.5
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 5.6e-19 97.8 83 73.5
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 5.6e-19 97.8 83 73.5
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 9.6e-19 97.1 93 48.4
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 2.1e-18 95.9 80 72.5
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 2.1e-18 95.9 98 48.0
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 6.2e-18 94.4 92 56.5
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 2.4e-17 92.4 82 53.7
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 3.1e-17 92.0 92 56.5
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 6.9e-17 90.9 80 72.5
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 6.9e-17 90.9 98 60.2
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 9.0e-17 90.5 126 50.8
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.2e-16 90.1 85 54.1
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.2e-16 90.1 98 57.1
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.2e-16 90.1 98 45.9
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 1.5e-16 89.7 95 58.9
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 2.0e-16 89.4 92 50.0
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 2.0e-16 89.4 99 57.6
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.6e-16 89.0 126 50.0
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 2.6e-16 89.0 110 42.7
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 3.4e-16 88.6 97 49.5
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 9.9e-16 87.0 83 49.4
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 9.9e-16 87.0 99 46.5
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 2.2e-15 85.9 128 51.6
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 2.9e-15 85.5 82 52.4
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 2.9e-15 85.5 125 41.6
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 3.8e-15 85.1 113 42.5
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 8.4e-15 84.0 95 46.3
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 1.1e-14 83.6 95 43.2
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 1.1e-14 83.6 71 54.9
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 1.9e-14 82.8 106 43.4
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 2.4e-14 82.4 125 49.6
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 2.4e-14 82.4 65 55.4
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 3.2e-14 82.0 88 47.7
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 3.2e-14 82.0 93 43.0
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 3.2e-14 82.0 87 47.1
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 3.2e-14 82.0 103 43.7
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 4.2e-14 81.6 102 42.2
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 4.2e-14 81.6 79 65.8
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 5.4e-14 81.3 128 50.8
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 5.4e-14 81.3 78 51.3
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 5.4e-14 81.3 87 49.4
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 5.4e-14 81.3 106 43.4
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 5.4e-14 81.3 79 64.6
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 5.4e-14 81.3 72 52.8
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 7.1e-14 80.9 113 40.7
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 7.1e-14 80.9 80 65.0
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 9.3e-14 80.5 98 54.1
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 1.2e-13 80.1 79 48.1
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 1.2e-13 80.1 80 63.8
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 1.6e-13 79.7 92 48.9
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 1.6e-13 79.7 65 64.6
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.6e-13 79.7 78 65.4
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 2.7e-13 79.0 86 41.9
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 6.0e-13 77.8 65 55.4
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 7.9e-13 77.4 113 50.4
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.8e-12 76.3 78 64.1
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 2.3e-12 75.9 91 45.1
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 3.0e-12 75.5 92 44.6
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 3.0e-12 75.5 68 51.5
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 5.1e-12 74.7 78 51.3
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 2.5e-11 72.4 103 50.5
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 3.6e-10 68.6 62 64.5
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 3.6e-10 68.6 62 50.0
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.8e-09 66.2 73 45.2
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.1e-09 65.5 62 48.4
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 5.3e-09 64.7 65 46.2
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 9.0e-09 63.9 85 45.9
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.5e-08 63.2 96 34.4
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 9.9e-08 60.5 45 60.0
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 9.9e-08 60.5 85 43.5
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.2e-07 59.3 54 51.9
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 3.8e-07 58.5 46 58.7
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 4.9e-07 58.2 63 50.8


User provided reference genes

Program Settings