Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 2.3e-102 375.6 187 100.0
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 8.2e-68 260.8 184 73.9
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 1.5e-66 256.5 193 69.9
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.6e-66 255.8 188 72.9
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.0e-65 253.8 193 69.9
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.3e-65 253.4 190 72.6
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.9e-65 252.3 197 69.0
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 2.9e-65 252.3 161 80.1
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.7e-63 245.0 182 70.3
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 6.1e-63 244.6 190 69.5
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.4e-62 243.4 144 81.9
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 3.0e-62 242.3 193 69.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 3.3e-61 238.8 141 82.3
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 2.0e-58 229.6 144 79.9
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.3e-57 226.9 147 76.2
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.3e-57 226.9 180 67.8
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.7e-57 226.5 154 72.7
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 2.9e-57 225.7 175 69.1
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.9e-57 225.7 191 65.4
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 3.8e-57 225.3 165 70.3
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 6.5e-57 224.6 186 61.3
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.9e-56 223.0 193 63.2
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 4.2e-56 221.9 145 75.9
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.5e-56 221.5 193 62.7
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 5.5e-56 221.5 143 74.8
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 5.5e-56 221.5 148 76.4
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 7.2e-56 221.1 181 68.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 7.2e-56 221.1 141 78.7
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 7.2e-56 221.1 174 67.8
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 9.4e-56 220.7 182 64.3
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.2e-55 220.3 183 64.5
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.6e-55 219.9 191 62.8
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 2.1e-55 219.5 182 63.7
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.7e-55 219.2 183 66.1
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 3.6e-55 218.8 120 85.8
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 4.7e-55 218.4 128 82.0
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 6.1e-55 218.0 177 66.1
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 6.1e-55 218.0 150 70.7
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.0e-54 217.2 172 67.4
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.4e-54 216.9 167 68.3
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.8e-54 216.5 174 63.8
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.3e-54 216.1 179 63.7
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 2.3e-54 216.1 142 72.5
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 4.0e-54 215.3 148 74.3
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 5.2e-54 214.9 146 73.3
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 6.8e-54 214.5 157 68.8
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 6.8e-54 214.5 174 65.5
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 6.8e-54 214.5 175 62.9
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 8.8e-54 214.2 152 71.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 1.2e-53 213.8 185 59.5
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.2e-53 213.8 167 67.1
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.5e-53 213.4 188 59.6
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 1.5e-53 213.4 183 63.9
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 1.5e-53 213.4 119 83.2
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.0e-53 213.0 126 79.4
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 2.0e-53 213.0 185 63.8
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.0e-53 213.0 119 83.2
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 2.6e-53 212.6 184 62.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 3.4e-53 212.2 150 70.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 4.4e-53 211.8 120 84.2
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.7e-53 211.5 173 63.6
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.7e-53 211.5 195 61.5
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 7.5e-53 211.1 143 74.1
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 7.5e-53 211.1 188 59.0
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 7.5e-53 211.1 119 82.4
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 9.8e-53 210.7 174 64.4
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 9.8e-53 210.7 140 70.7
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.7e-52 209.9 119 82.4
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.7e-52 209.9 152 69.7
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 2.2e-52 209.5 164 64.6
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 2.8e-52 209.1 146 68.5
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 2.8e-52 209.1 146 68.5
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 3.7e-52 208.8 180 62.8
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.7e-52 208.8 118 83.9
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 4.8e-52 208.4 196 59.2
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 4.8e-52 208.4 117 83.8
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.4e-51 206.8 183 61.7
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.4e-51 206.8 168 62.5
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 1.8e-51 206.5 193 59.1
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.8e-51 206.5 185 58.4
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.8e-51 206.5 192 58.9
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.8e-51 206.5 171 62.0
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.4e-51 206.1 118 82.2
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.1e-51 205.7 182 60.4
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 4.1e-51 205.3 128 80.5
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.2e-50 203.8 195 58.5
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.0e-50 203.0 170 62.9
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 3.5e-50 202.2 124 77.4
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.0e-49 200.7 154 66.2
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 5.5e-48 194.9 156 61.5
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 3.0e-46 189.1 179 55.9
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 6.8e-46 188.0 138 65.2
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 8.8e-46 187.6 159 59.1
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.0e-45 186.4 139 66.2
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.0e-45 186.4 171 56.1
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.0e-45 186.4 138 68.1
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.3e-44 183.7 120 70.8
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.4e-43 180.3 120 69.2
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 4.1e-43 178.7 173 57.2
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 5.4e-43 178.3 153 54.9
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 7.7e-42 174.5 191 53.4
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.3e-41 173.7 189 55.0
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 7.2e-40 167.9 137 59.9
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.4e-35 153.7 139 54.0
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.7e-34 149.4 138 52.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 5.9e-34 148.3 138 52.9
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.5e-32 143.7 116 59.5
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 6.8e-22 108.2 128 48.4
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.0e-21 106.7 184 40.2
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 2.6e-21 106.3 111 53.2
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 5.8e-21 105.1 113 52.2
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.7e-20 102.4 57 80.7
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 6.4e-20 101.7 104 52.9
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 3.2e-19 99.4 116 46.6
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 4.7e-15 85.5 65 60.0
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.6e-10 70.5 106 43.4
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.4e-06 57.4 60 48.3


User provided reference genes

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