Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 7.1e-75 283.9 147 100.0
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.9e-59 232.6 147 81.0
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 2.5e-59 232.3 147 80.3
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 2.5e-59 232.3 147 81.6
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 4.2e-59 231.5 147 80.3
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 6.1e-58 227.6 147 78.2
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 5.7e-56 221.1 147 76.2
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 9.7e-56 220.3 139 79.1
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 77.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 77.6
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 74.8
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 2.2e-55 219.2 147 76.2
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 2.2e-55 219.2 145 76.6
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 2.2e-55 219.2 147 74.8
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 76.2
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 6.3e-55 217.6 147 74.8
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.1e-54 216.9 145 76.6
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 75.5
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.8e-54 216.1 147 74.8
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 2.4e-54 215.7 145 75.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.4e-54 215.7 145 75.9
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 2.4e-54 215.7 146 78.1
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 4.1e-54 214.9 147 74.1
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 4.1e-54 214.9 147 74.8
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 5.3e-54 214.5 145 75.2
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 6.9e-54 214.2 149 73.8
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 9.1e-54 213.8 147 74.1
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 9.1e-54 213.8 145 75.2
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.2e-53 213.4 147 75.5
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.5e-53 213.0 147 73.5
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.5e-53 213.0 147 76.2
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 2.0e-53 212.6 147 72.1
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 5.9e-53 211.1 147 74.8
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 7.7e-53 210.7 147 74.1
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 72.1
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 72.1
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.2e-52 209.1 148 73.6
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.2e-52 209.1 148 73.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.2e-52 209.1 145 73.1
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 72.1
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 5.0e-52 208.0 147 73.5
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 6.5e-52 207.6 147 74.8
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 6.5e-52 207.6 147 71.4
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 6.5e-52 207.6 147 71.4
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 74.8
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 72.8
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 72.8
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 72.8
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 73.5
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 73.5
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 1.1e-51 206.8 147 72.8
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-51 206.8 147 72.1
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.4e-51 206.5 147 72.8
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 2.5e-51 205.7 147 75.5
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 3.2e-51 205.3 147 70.1
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 5.5e-51 204.5 147 68.7
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 7.2e-51 204.1 147 70.1
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 9.4e-51 203.8 148 70.3
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 9.4e-51 203.8 149 71.1
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.6e-50 203.0 147 71.4
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 3.6e-50 201.8 147 70.7
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 3.6e-50 201.8 144 69.4
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 1.0e-49 200.3 155 69.7
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.0e-49 200.3 147 69.4
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 6.7e-49 197.6 147 68.0
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 6.7e-49 197.6 147 70.7
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 1.1e-48 196.8 147 70.1
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 1.1e-48 196.8 147 68.0
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 2.0e-48 196.1 149 69.8
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.6e-48 195.7 147 66.0
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 2.6e-48 195.7 147 69.4
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 3.3e-48 195.3 147 69.4
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 7.4e-48 194.1 147 68.7
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 9.7e-48 193.7 150 66.7
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 9.7e-48 193.7 147 67.3
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.8e-47 192.2 147 68.0
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 3.7e-47 191.8 147 66.0
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.8e-46 189.5 147 66.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 9.1e-46 187.2 147 66.7
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.5e-45 186.4 147 67.3
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 1.5e-45 186.4 151 66.9
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 2.6e-45 185.7 138 70.3
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.6e-45 185.7 147 67.3
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.9e-45 184.5 147 66.7
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 1.7e-44 183.0 148 68.2
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 2.9e-44 182.2 150 68.0
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 3.8e-44 181.8 147 64.6
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 8.5e-44 180.6 147 63.9
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.4e-43 179.9 149 63.8
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.9e-43 179.5 150 62.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.9e-43 179.5 150 62.7
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 3.2e-43 178.7 152 67.8
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.2e-42 176.8 152 62.5
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 6.1e-42 174.5 154 61.0
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.0e-41 173.7 158 60.8
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.4e-41 173.3 151 60.9
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.8e-41 172.9 153 61.4
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 2.3e-41 172.6 155 60.6
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 3.0e-41 172.2 155 61.3
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 6.7e-41 171.0 147 61.2
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.1e-40 170.2 115 72.2
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.1e-40 170.2 147 61.2
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 7.4e-40 167.5 154 59.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 7.4e-40 167.5 147 62.6
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.8e-38 162.9 152 57.2
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.6e-37 159.8 149 59.1
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 4.5e-37 158.3 139 60.4
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 4.5e-37 158.3 139 60.4
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.0e-36 157.1 109 71.6
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 7.2e-35 151.0 100 73.0
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.2e-34 150.2 105 68.6
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 1.6e-34 149.8 161 50.9
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.6e-34 149.8 113 73.5
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 1.8e-33 146.4 151 55.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 8.8e-33 144.1 149 53.7
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 5.7e-32 141.4 133 60.2
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 4.8e-31 138.3 147 54.4
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.1e-30 137.1 140 56.4
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 3.5e-29 132.1 130 55.4
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.1e-27 127.1 86 73.3
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 9.4e-27 124.0 153 49.0
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 3.0e-25 119.0 85 68.2
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.3e-23 113.6 152 43.4
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.8e-23 111.7 88 62.5
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.8e-23 111.7 88 62.5
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 3.1e-22 109.0 135 44.4
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 3.6e-18 95.5 78 61.5
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 6.1e-18 94.7 166 41.0
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 2.3e-17 92.8 145 44.1
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 3.4e-16 89.0 75 54.7
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.4e-16 88.6 69 62.3
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 4.4e-16 88.6 79 50.6
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 5.7e-16 88.2 69 62.3
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.5e-16 87.8 69 60.9
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 9.8e-16 87.4 71 59.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.3e-15 87.0 69 56.5
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.3e-15 84.3 71 54.9
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.3e-15 84.3 71 54.9
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.1e-14 84.0 72 65.3
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 2.4e-14 82.8 79 51.9
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 5.4e-14 81.6 134 35.8
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 3.3e-11 72.4 83 44.6
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.3e-11 72.4 72 48.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.3e-07 60.5 70 41.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.4e-06 57.0 122 36.1
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 3.2e-06 55.8 72 37.5
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 3.2e-06 55.8 72 38.9
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 5.4e-06 55.1 51 54.9


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