Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 8.4e-41 169.9 82 100.0
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 8.4e-41 169.9 82 100.0
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 5.6e-29 130.6 83 80.7
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 9.6e-29 129.8 90 75.6
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 9.6e-29 129.8 91 74.7
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.3e-28 129.4 84 78.6
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 3.6e-28 127.9 92 73.9
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 3.4e-26 121.3 88 72.7
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 7.6e-26 120.2 86 72.1
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.9e-25 118.2 84 69.0
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 6.4e-25 117.1 86 68.6
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 8.4e-25 116.7 88 69.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.1e-24 116.3 83 71.1
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.1e-24 116.3 87 67.8
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.1e-24 116.3 76 73.7
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.4e-24 115.9 88 68.2
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.9e-24 115.5 85 69.4
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.9e-24 115.5 87 70.1
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 2.4e-24 115.2 87 70.1
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 3.2e-24 114.8 87 69.0
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.2e-24 114.8 84 70.2
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.2e-24 114.4 89 67.4
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 5.4e-24 114.0 89 66.3
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 5.4e-24 114.0 84 67.9
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 7.1e-24 113.6 83 67.5
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 7.1e-24 113.6 87 70.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 9.3e-24 113.2 56 96.4
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.2e-23 112.8 94 64.9
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 2.1e-23 112.1 92 64.1
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 2.7e-23 111.7 55 94.5
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.7e-23 111.7 55 94.5
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.7e-23 111.7 55 94.5
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.7e-23 111.7 55 94.5
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 3.5e-23 111.3 88 67.0
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.6e-23 110.9 89 65.2
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 6.0e-23 110.5 55 92.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 6.0e-23 110.5 90 65.6
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 6.0e-23 110.5 64 84.4
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 6.0e-23 110.5 64 84.4
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.0e-23 110.5 58 87.9
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 6.0e-23 110.5 83 67.5
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.9e-23 110.2 89 65.2
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 7.9e-23 110.2 67 80.6
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 7.9e-23 110.2 97 59.8
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 7.9e-23 110.2 55 92.7
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 7.9e-23 110.2 69 76.8
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.0e-22 109.8 87 65.5
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 1.0e-22 109.8 55 92.7
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.0e-22 109.8 84 69.0
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.3e-22 109.4 89 65.2
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.3e-22 109.4 89 64.0
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.3e-22 109.4 55 92.7
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.8e-22 109.0 56 91.1
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 5.1e-22 107.5 57 89.5
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 6.7e-22 107.1 65 80.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.1e-21 106.3 92 60.9
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.9e-21 105.5 55 87.3
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 3.3e-21 104.8 85 63.5
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 3.3e-21 104.8 81 65.4
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 7.4e-21 103.6 53 92.5
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 7.4e-21 103.6 53 92.5
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 7.4e-21 103.6 53 92.5
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 7.4e-21 103.6 64 79.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 7.4e-21 103.6 53 92.5
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 9.6e-21 103.2 79 64.6
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.6e-20 102.4 53 90.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.6e-20 102.4 77 67.5
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 2.1e-20 102.1 88 62.5
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 2.8e-20 101.7 53 90.6
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.8e-20 100.9 81 64.2
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.8e-20 100.9 81 64.2
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 6.2e-20 100.5 54 85.2
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 6.2e-20 100.5 53 88.7
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 6.2e-20 100.5 61 77.0
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 6.2e-20 100.5 53 88.7
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 6.2e-20 100.5 53 88.7
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 8.1e-20 100.1 53 88.7
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.1e-19 99.8 54 83.3
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 1.1e-19 99.8 56 80.4
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.4e-19 99.4 53 86.8
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.4e-19 99.4 53 86.8
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 2.4e-19 98.6 67 71.6
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 4.0e-19 97.8 57 77.2
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.3e-19 97.4 59 76.3
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.3e-19 97.4 59 76.3
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 2.6e-18 95.1 64 73.4
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.3e-17 92.8 77 63.6
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 1.7e-17 92.4 77 61.0
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 6.5e-17 90.5 70 70.0
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 8.4e-17 90.1 75 65.3
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.2e-16 87.8 57 75.4
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 7.1e-16 87.0 72 63.9
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 9.3e-16 86.7 64 68.8
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.6e-15 85.9 71 66.2
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 2.1e-15 85.5 71 62.0
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.7e-15 85.1 43 93.0
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.7e-15 85.1 43 93.0
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 3.5e-15 84.7 50 78.0
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 3.9e-14 81.3 44 86.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 6.7e-14 80.5 45 86.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 8.7e-14 80.1 50 84.0
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 2.5e-13 78.6 41 85.4
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 3.3e-13 78.2 43 81.4
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 4.3e-13 77.8 39 92.3
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 5.7e-13 77.4 42 83.3
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 5.7e-13 77.4 60 66.7
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 9.6e-13 76.6 41 87.8
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 1.6e-12 75.9 77 55.8
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.1e-11 73.2 45 75.6
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.1e-08 63.2 38 84.2
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.1e-08 63.2 38 84.2
Pp3c2_9610 Physcomitrium patens HOM05D007135 ORTHO05D008880 2.3e-06 55.5 73 43.8
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 3.0e-06 55.1 70 45.7
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 3.9e-06 54.7 70 44.3


User provided reference genes

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