Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0356171 Lupinus albus HOM05D001920 ORTHO05D005408 0.0e+00 1149.0 587 100.0
Ca_03647_v3 Cicer arietinum L. HOM05D001920 ORTHO05D005408 2.8e-287 991.5 581 88.3
arahy.Tifrunner.gnm1.ann1.UJN8CA Arachis hypogaea HOM05D001920 ORTHO05D005408 2.0e-285 985.3 611 84.8
Psat4g103240 Pisum sativum HOM05D001920 ORTHO05D005408 8.3e-284 979.9 581 87.4
arahy.Tifrunner.gnm1.ann1.9L6JUF Arachis hypogaea HOM05D001920 ORTHO05D005408 1.2e-282 976.1 583 87.3
Medtr8g074590 Medicago truncatula HOM05D001920 ORTHO05D005408 2.1e-282 975.3 542 91.5
Glyma.16G120600 Glycine max HOM05D001920 ORTHO05D005408 5.6e-280 967.2 559 88.4
Glyma.02G043400 Glycine max HOM05D001920 ORTHO05D005408 1.1e-278 963.0 584 86.1
arahy.Tifrunner.gnm1.ann1.14SSX1 Arachis hypogaea HOM05D001920 ORTHO05D005408 1.8e-278 962.2 548 90.1
arahy.Tifrunner.gnm1.ann1.RZJX0Q Arachis hypogaea HOM05D001920 ORTHO05D005408 1.5e-277 959.1 583 86.4
Phvul.003G267800 Phaseolus vulgaris HOM05D001920 ORTHO05D005408 1.7e-276 955.7 570 86.0
VMungo0251G2102 Vigna mungo HOM05D001920 ORTHO05D005408 8.3e-276 953.4 585 84.4
Lj4g0027878 Lotus japonicus HOM05D001920 ORTHO05D005408 1.0e-273 946.4 564 87.1
Atru.chr7.1932 Acer truncatum HOM05D001920 ORTHO05D005408 1.5e-269 932.6 568 83.6
Ciclev10007867m.g Citrus clementina HOM05D001920 ORTHO05D005408 3.8e-268 927.9 569 82.8
Duzib187G1306 Durio zibethinus HOM05D001920 ORTHO05D005408 1.9e-267 925.6 565 83.2
Cfa017979 Carpinus fangiana HOM05D001920 ORTHO05D005408 5.4e-267 924.1 551 84.6
CiPaw.15G036600 Carya illinoinensis HOM05D001920 ORTHO05D005408 4.6e-266 921.0 573 81.3
Haze_18151 Corylus avellana HOM05D001920 ORTHO05D005408 7.8e-266 920.2 604 78.8
PGR044G1731 Punica granatum HOM05D001920 ORTHO05D005408 2.3e-265 918.7 565 82.1
COL.COLO4_21094 Corchorus olitorius HOM05D001920 ORTHO05D005408 6.6e-265 917.1 568 82.7
CANSAT11G1997 Cannabis sativa HOM05D001920 ORTHO05D005408 8.7e-265 916.8 566 82.7
Potri.006G225500 Populus trichocarpa HOM05D001920 ORTHO05D005408 1.1e-264 916.4 569 82.4
CsaV3_4G035800 Cucumis sativus L. HOM05D001920 ORTHO05D005408 1.5e-264 916.0 550 83.5
Gohir.D08G268800 Gossypium hirsutum HOM05D001920 ORTHO05D005408 4.8e-263 911.0 568 81.3
Dinv12437 Davidia involucrata HOM05D001920 ORTHO05D005408 8.1e-263 910.2 540 85.9
Gorai.004G286500 Gossypium raimondii HOM05D001920 ORTHO05D005408 8.1e-263 910.2 568 81.2
Prupe.1G408800 Prunus persica HOM05D001920 ORTHO05D005408 8.1e-263 910.2 523 87.4
Sabra06G0174400 Salix brachista HOM05D001920 ORTHO05D005408 2.4e-262 908.7 569 82.2
MD08G1065800 Malus domestica HOM05D001920 ORTHO05D005408 2.0e-261 905.6 575 80.5
Gohir.A08G247700 Gossypium hirsutum HOM05D001920 ORTHO05D005408 7.6e-261 903.7 548 83.4
ClCG05G018020 Citrullus lanatus HOM05D001920 ORTHO05D005408 1.3e-260 902.9 550 82.7
Thecc.09G057700 Theobroma cacao HOM05D001920 ORTHO05D005408 1.3e-260 902.9 560 82.1
HanXRQChr10g0309741 Helianthus annuus HOM05D001920 ORTHO05D005408 2.2e-260 902.1 569 80.1
TWI63G1659 Tripterygium wilfordii HOM05D001920 ORTHO05D005408 6.4e-260 900.6 563 81.3
CSS0047067 Camellia sinensis var. sinensis HOM05D001920 ORTHO05D005408 1.1e-259 899.8 562 81.7
TAR626G1364 Trochodendron aralioides HOM05D001920 ORTHO05D005408 1.1e-259 899.8 569 79.6
Peaxi162Scf00694g00218 Petunia axillaris HOM05D001920 ORTHO05D005408 1.9e-259 899.0 573 80.6
MD15G1055600 Malus domestica HOM05D001920 ORTHO05D005408 3.2e-259 898.3 581 79.5
Manes.16G082600 Manihot esculenta HOM05D001920 ORTHO05D005408 3.2e-259 898.3 518 86.7
GSVIVG01035413001 Vitis vinifera HOM05D001920 ORTHO05D005408 3.2e-259 898.3 518 86.7
TWI34G1596 Tripterygium wilfordii HOM05D001920 ORTHO05D005408 2.1e-258 895.6 521 85.4
HanXRQChr12g0359101 Helianthus annuus HOM05D001920 ORTHO05D005408 2.7e-258 895.2 573 80.3
Lsat_1_v5_gn_4_73880 Lactuca sativa HOM05D001920 ORTHO05D005408 4.6e-258 894.4 582 78.7
vmacro07770 Vaccinium macrocarpon HOM05D001920 ORTHO05D005408 4.6e-258 894.4 573 79.9
CAN.G219.68 Capsicum annuum HOM05D001920 ORTHO05D005408 1.0e-257 893.3 531 84.0
Nitab4.5_0004053g0020 Nicotiana tabacum HOM05D001920 ORTHO05D005408 1.3e-257 892.9 573 80.3
Hund19436 Selenicereus undatus HOM05D001920 ORTHO05D005408 6.6e-257 890.6 568 79.8
QL02p000680 Quercus lobata HOM05D001920 ORTHO05D005408 1.9e-256 889.0 581 78.5
Migut.D00410 Erythranthe guttata HOM05D001920 ORTHO05D005408 3.3e-256 888.3 564 79.4
EL10Ac8g19267 Beta vulgaris HOM05D001920 ORTHO05D005408 7.3e-256 887.1 577 78.3
FAN27G2437 Fragaria x ananassa HOM05D001920 ORTHO05D005408 9.6e-256 886.7 558 79.9
RhsimUnG0209800 Rhododendron simsii HOM05D001920 ORTHO05D005408 2.1e-255 885.6 573 79.2
PGSC0003DMG400006851 Solanum tuberosum HOM05D001920 ORTHO05D005408 6.2e-255 884.0 569 79.3
SalBow4G2367 Salvia bowleyana HOM05D001920 ORTHO05D005408 8.1e-255 883.6 575 79.0
THA.LOC104799157 Tarenaya hassleriana HOM05D001920 ORTHO05D005408 8.1e-255 883.6 576 78.6
Ah.09g228460 Amaranthus hybridus HOM05D001920 ORTHO05D005408 1.8e-254 882.5 574 77.7
FAN20G0594 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.1e-254 881.7 560 79.5
Actinidia29326 Actinidia chinensis HOM05D001920 ORTHO05D005408 1.5e-253 879.4 578 78.4
FvH4_2g31510 Fragaria vesca HOM05D001920 ORTHO05D005408 2.0e-253 879.0 558 79.6
Cc08_g10930 Coffea canephora HOM05D001920 ORTHO05D005408 2.6e-253 878.6 563 78.3
Lj7A258G43 Lonicera japonica HOM05D001920 ORTHO05D005408 4.5e-253 877.9 559 81.6
Sc23g0005750 Simmondsia chinensis HOM05D001920 ORTHO05D005408 7.6e-253 877.1 567 79.2
RcHm_v2.0_Chr6g0311281 Rosa chinensis HOM05D001920 ORTHO05D005408 1.7e-252 875.9 574 78.2
Thhalv10013117m.g Eutrema salsugineum HOM05D001920 ORTHO05D005408 1.4e-251 872.8 555 79.8
A02p01310 Brassica napus HOM05D001920 ORTHO05D005408 1.9e-251 872.5 566 78.6
BraA02t05109Z Brassica rapa HOM05D001920 ORTHO05D005408 1.9e-251 872.5 566 78.6
Sopen01g034610 Solanum pennellii HOM05D001920 ORTHO05D005408 1.9e-251 872.5 570 78.4
BcaC03g13404 Brassica carinata HOM05D001920 ORTHO05D005408 3.2e-251 871.7 566 78.6
C02p05530 Brassica napus HOM05D001920 ORTHO05D005408 3.2e-251 871.7 566 78.6
BolC2t06498H Brassica oleracea HOM05D001920 ORTHO05D005408 3.2e-251 871.7 566 78.6
Sp6g31610 Schrenkiella parvula HOM05D001920 ORTHO05D005408 3.2e-251 871.7 550 79.6
FAN15G2558 Fragaria x ananassa HOM05D001920 ORTHO05D005408 9.3e-251 870.2 570 78.1
Solyc01g087650.4 Solanum lycopersicum HOM05D001920 ORTHO05D005408 1.2e-250 869.8 571 78.3
FAN24G1332 Fragaria x ananassa HOM05D001920 ORTHO05D005408 1.6e-250 869.4 570 77.9
CARHR201150 Cardamine hirsuta HOM05D001920 ORTHO05D005408 2.1e-250 869.0 551 79.7
AL6G22770 Arabidopsis lyrata HOM05D001920 ORTHO05D005408 3.5e-250 868.2 554 79.4
MSTRG.14078 Avicennia marina HOM05D001920 ORTHO05D005408 7.9e-250 867.1 533 81.4
C03p06150 Brassica napus HOM05D001920 ORTHO05D005408 1.8e-249 865.9 540 81.1
BolC3t13123H Brassica oleracea HOM05D001920 ORTHO05D005408 2.3e-249 865.5 540 80.9
Carub.0006s1052 Capsella rubella HOM05D001920 ORTHO05D005408 8.7e-249 863.6 565 78.2
AUR62031243 Chenopodium quinoa HOM05D001920 ORTHO05D005408 1.1e-248 863.2 568 76.9
DCAR_003139 Daucus carota HOM05D001920 ORTHO05D005408 4.8e-247 857.8 577 76.1
PSO210G2773 Papaver somniferum HOM05D001920 ORTHO05D005408 6.2e-247 857.4 576 76.4
Aa31LG3G15240 Aethionema arabicum HOM05D001920 ORTHO05D005408 8.1e-247 857.1 544 80.1
Aqoxy6G00323 Aquilegia oxysepala HOM05D001920 ORTHO05D005408 3.1e-246 855.1 581 74.9
MELO3C016885.2 Cucumis melo HOM05D001920 ORTHO05D005408 1.5e-245 852.8 550 79.3
A03p05350 Brassica napus HOM05D001920 ORTHO05D005408 2.9e-244 848.6 541 78.7
RhsimUnG0018300 Rhododendron simsii HOM05D001920 ORTHO05D005408 3.8e-244 848.2 573 76.8
CDE05G1481 Ceratophyllum demersum HOM05D001920 ORTHO05D005408 1.1e-243 846.7 545 77.4
BraA03t09873Z Brassica rapa HOM05D001920 ORTHO05D005408 9.3e-243 843.6 569 76.1
PSO210G7360 Papaver somniferum HOM05D001920 ORTHO05D005408 9.3e-243 843.6 548 77.9
AUR62027456 Chenopodium quinoa HOM05D001920 ORTHO05D005408 3.5e-242 841.6 558 76.9
ECA234G0290 Erigeron canadensis HOM05D001920 ORTHO05D005408 1.1e-240 836.6 574 75.8
Migut.E01586 Erythranthe guttata HOM05D001920 ORTHO05D005408 3.3e-240 835.1 566 75.6
BcaB01g05437 Brassica carinata HOM05D001920 ORTHO05D005408 1.4e-238 829.7 513 80.5
Actinidia03557 Actinidia chinensis HOM05D001920 ORTHO05D005408 3.0e-233 812.0 490 82.9
BcaNung02634 Brassica carinata HOM05D001920 ORTHO05D005408 8.7e-233 810.4 567 74.4
Nn8g38775 Nelumbo nucifera HOM05D001920 ORTHO05D005408 2.8e-231 805.4 466 85.8
ATR0686G037 Amborella trichopoda HOM05D001920 ORTHO05D005408 2.0e-229 799.3 574 71.4
AT5G11980 Arabidopsis thaliana HOM05D001920 ORTHO05D005408 2.6e-229 798.9 472 85.2
unitig_8.g5056 Utricularia gibba HOM05D001920 ORTHO05D005408 1.0e-228 797.0 574 71.6
Eucgr.C03063 Eucalyptus grandis HOM05D001920 ORTHO05D005408 1.1e-227 793.5 528 76.5
Cpa.g.sc222.19 Carica papaya HOM05D001920 ORTHO05D005408 7.4e-224 780.8 552 75.2
HPP92_005529 Vanilla planifolia HOM05D001920 ORTHO05D005408 7.4e-224 780.8 588 68.4
Hma1.2p1_0077F.1_g039730 Hydrangea macrophylla HOM05D001920 ORTHO05D005408 2.0e-221 772.7 488 80.7
TPR.G14979 Trifolium pratense HOM05D001920 ORTHO05D005408 7.2e-219 764.2 424 91.7
Os12g0538300 Oryza sativa ssp. japonica HOM05D001920 ORTHO05D005408 1.2e-218 763.5 493 75.1
Zm00001eb006920 Zea mays HOM05D001920 ORTHO05D005408 2.3e-217 759.2 516 72.1
Zm00001eb401360 Zea mays HOM05D001920 ORTHO05D005408 1.3e-212 743.4 589 64.7
Sed0005137 Sechium edule HOM05D001920 ORTHO05D005408 5.5e-211 738.0 453 80.8
Sed0005880 Sechium edule HOM05D001920 ORTHO05D005408 1.2e-210 736.9 431 83.3
Hma1.2p1_0196F.1_g084800 Hydrangea macrophylla HOM05D001920 ORTHO05D005408 3.8e-204 715.3 545 70.5
MBI18_g38862_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D005408 3.5e-197 692.2 562 65.5
Mapoly0087s0038 Marchantia polymorpha HOM05D001920 ORTHO05D005408 1.0e-196 690.6 561 63.1
Nitab4.5_0000707g0110 Nicotiana tabacum HOM05D001920 ORTHO05D005408 4.4e-192 675.2 574 65.2
Pp3c10_11790 Physcomitrium patens HOM05D001920 ORTHO05D005408 3.5e-189 665.6 550 60.9
SGA_v2.0_scaffold169G38703 Striga asiatica HOM05D001920 ORTHO05D005408 5.0e-188 661.8 579 62.0
SHI18715 Sapria himalayana HOM05D001920 ORTHO05D005408 6.1e-186 654.8 460 72.0
CBR_g34170 Chara braunii HOM05D001920 ORTHO05D005408 1.6e-181 640.2 559 57.2
SMO356G0672 Selaginella moellendorffii HOM05D001920 ORTHO05D005408 5.0e-180 635.2 506 63.2
Oeu003998.1 Olea europaea HOM05D001920 ORTHO05D005408 2.5e-179 632.9 577 61.7
Lj7C259T3 Lonicera japonica HOM05D001920 ORTHO05D005408 4.6e-165 585.5 318 90.9
MBI05_g36626_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D005408 2.3e-164 583.2 537 60.1
RcHm_v2.0_Chr4g0442191 Rosa chinensis HOM05D001920 ORTHO05D005408 3.1e-161 572.8 528 58.3
Lj7C264G4 Lonicera japonica HOM05D001920 ORTHO05D005408 9.9e-160 567.8 502 61.0
FvH4_4g33140 Fragaria vesca HOM05D001920 ORTHO05D005408 1.3e-156 557.4 504 58.7
FAN12G3829 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.0e-156 556.2 504 58.5
FAN07G1923 Fragaria x ananassa HOM05D001920 ORTHO05D005408 1.9e-155 553.5 503 58.4
SGA_v2.0_scaffold163G38013 Striga asiatica HOM05D001920 ORTHO05D005408 4.0e-153 545.8 356 80.6
Pp3c2_14420 Physcomitrium patens HOM05D001920 ORTHO05D005408 2.0e-152 543.5 494 56.7
AagrBONN_evm.TU.Sc2ySwM_228.4615 Anthoceros agrestis HOM05D001920 ORTHO05D005408 3.2e-134 483.0 331 70.7
FAN22G0219 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.2e-134 483.0 501 52.7
PRCOL_00001520 Prasinoderma coloniale HOM05D001920 ORTHO05D005408 2.5e-123 446.8 493 48.1
Oeu004630.1 Olea europaea HOM05D001920 ORTHO05D005408 4.6e-117 426.0 618 45.5
Cre10.g439650 Chlamydomonas reinhardtii HOM05D001920 ORTHO05D005408 3.2e-102 376.7 527 39.8
FAN17G1736 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.9e-100 369.8 433 50.3
MCO04G241 Micromonas commoda HOM05D001920 ORTHO05D005408 1.6e-88 331.3 423 41.8
FAN12G2252 Fragaria x ananassa HOM05D001920 ORTHO05D005408 7.2e-86 322.4 346 54.0
CDE05G0360 Ceratophyllum demersum HOM05D001920 ORTHO05D005408 2.9e-71 273.9 185 69.7
Migut.A00111 Erythranthe guttata HOM05D001920 ORTHO05D005408 1.4e-68 265.0 164 83.5
Gorai.009G043000 Gossypium raimondii HOM05D001920 ORTHO05D005408 1.1e-65 255.4 558 36.6
CDE05G1717 Ceratophyllum demersum HOM05D001920 ORTHO05D005408 2.0e-59 234.6 256 50.4
MBI13_g05979_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D005408 1.4e-52 211.8 405 37.0
arahy.Tifrunner.gnm1.ann1.NPWH83 Arachis hypogaea HOM05D001920 ORTHO05D005408 1.6e-48 198.4 105 93.3
SEGI_36171 Sequoiadendron giganteum HOM05D001920 ORTHO05D000001 1.1e-44 185.7 139 67.6
MSTRG.25967 Avicennia marina HOM05D001920 ORTHO05D005408 3.3e-38 164.1 105 81.0
Lj7A264G15 Lonicera japonica HOM05D001920 ORTHO05D005408 7.3e-38 162.9 117 80.3
Gohir.D05G042133 Gossypium hirsutum HOM05D001920 ORTHO05D005408 5.2e-36 156.8 213 47.4
Eucgr.L03492 Eucalyptus grandis HOM05D001920 ORTHO05D005408 6.9e-36 156.4 148 55.4
BcaNung02635 Brassica carinata HOM05D001920 ORTHO05D005408 1.3e-31 142.1 80 85.0
TPR.G14973 Trifolium pratense HOM05D001920 ORTHO05D005408 2.1e-29 134.8 135 54.1
TPR.G36194 Trifolium pratense HOM05D001920 ORTHO05D005408 1.8e-28 131.7 93 77.4
Hma1.2p1_0196F.1_g084820 Hydrangea macrophylla HOM05D001920 ORTHO05D005408 3.1e-28 131.0 89 82.0
TPR.G748 Trifolium pratense HOM05D001920 ORTHO05D005408 1.1e-25 122.5 65 95.4
Zm00001eb014540 Zea mays HOM05D000282 ORTHO05D000272 1.2e-19 102.4 101 56.4
BcaC05g26027 Brassica carinata HOM05D001920 ORTHO05D024365 1.3e-18 99.0 71 73.2
TPR.G36118 Trifolium pratense HOM05D001920 ORTHO05D005408 1.2e-16 92.4 54 88.9
SGA_v2.0_scaffold26G11215 Striga asiatica HOM05D001920 ORTHO05D024365 1.0e-15 89.4 50 86.0
C05p19930 Brassica napus HOM05D001920 ORTHO05D024365 1.4e-12 79.0 53 71.7
MBI17_g36954_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D012920 3.1e-12 77.8 71 62.0
C06p01410 Brassica napus HOM05D001920 ORTHO05D024365 4.0e-12 77.4 77 55.8
ECA232G0588 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-11 75.5 49 75.5
BolC5t30691H Brassica oleracea HOM05D001920 ORTHO05D024365 1.1e-09 69.3 43 76.7
ATR0009G028 Amborella trichopoda HOM05D001920 ORTHO05D005408 1.1e-06 59.3 46 54.3
ATR0009G024 Amborella trichopoda HOM05D001920 ORTHO05D005408 3.3e-06 57.8 67 46.3
Lj7A259T19 Lonicera japonica HOM05D001920 ORTHO05D235283 4.3e-06 57.4 148 34.5
Lsat_1_v5_gn_6_51140 Lactuca sativa HOM05D001920 ORTHO05D233273 5.7e-06 57.0 52 55.8


User provided reference genes

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