Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0356131 Lupinus albus HOM05D000181 ORTHO05D004115 3.9e-27 124.0 60 100.0
Lalb_Chr24g0399691 Lupinus albus HOM05D000181 ORTHO05D004115 1.2e-20 102.4 59 79.7
QL02p001047 Quercus lobata HOM05D000181 ORTHO05D004115 8.9e-16 86.3 59 67.8
Lj1g0003102 Lotus japonicus HOM05D000181 ORTHO05D004115 1.7e-14 82.0 59 66.1
CiPaw.15G037900 Carya illinoinensis HOM05D000181 ORTHO05D004115 2.2e-14 81.6 59 64.4
Potri.006G227700 Populus trichocarpa HOM05D000181 ORTHO05D004115 6.4e-14 80.1 59 61.0
Sabra06G0176200 Salix brachista HOM05D000181 ORTHO05D004115 8.3e-14 79.7 59 61.0
arahy.Tifrunner.gnm1.ann1.0K8AZ2 Arachis hypogaea HOM05D000181 ORTHO05D004115 1.4e-13 79.0 59 66.1
arahy.Tifrunner.gnm1.ann1.V8EHWM Arachis hypogaea HOM05D000181 ORTHO05D004115 3.2e-13 77.8 59 61.0
arahy.Tifrunner.gnm1.ann1.UJ20FY Arachis hypogaea HOM05D000181 ORTHO05D004115 1.6e-12 75.5 59 61.0
Manes.16G081300 Manihot esculenta HOM05D000181 ORTHO05D004115 2.1e-12 75.1 59 61.0
Ciclev10007603m.g Citrus clementina HOM05D000181 ORTHO05D004115 3.5e-12 74.3 59 57.6
Lalb_Chr23g0267791 Lupinus albus HOM05D000181 ORTHO05D004115 6.0e-12 73.6 59 61.0
Manes.03G049000 Manihot esculenta HOM05D000181 ORTHO05D004115 6.0e-12 73.6 59 64.4
Medtr3g104470 Medicago truncatula HOM05D000181 ORTHO05D004115 1.0e-11 72.8 59 62.7
Glyma.17G228100 Glycine max HOM05D000181 ORTHO05D004115 1.3e-11 72.4 59 64.4
VMungo0647G1346 Vigna mungo HOM05D000181 ORTHO05D004115 3.9e-11 70.9 59 59.3
Ca_15861_v3 Cicer arietinum L. HOM05D000181 ORTHO05D004115 1.5e-10 68.9 59 59.3
GSVIVG01035393001 Vitis vinifera HOM05D000181 ORTHO05D004115 1.9e-10 68.6 59 57.6
TPR.G3550 Trifolium pratense HOM05D000181 ORTHO05D004115 4.3e-10 67.4 59 59.3
CiPaw.16G028100 Carya illinoinensis HOM05D000181 ORTHO05D004115 5.6e-10 67.0 59 54.2
Glyma.14G096000 Glycine max HOM05D000181 ORTHO05D004115 5.6e-10 67.0 59 59.3
Phvul.001G036400 Phaseolus vulgaris HOM05D000181 ORTHO05D004115 5.6e-10 67.0 59 55.9
TAR624G0593 Trochodendron aralioides HOM05D000181 ORTHO05D004115 5.6e-10 67.0 59 55.9
TAR636G0478 Trochodendron aralioides HOM05D000181 ORTHO05D004115 7.3e-10 66.6 59 50.8
VMungo0647G0127 Vigna mungo HOM05D000181 ORTHO05D004115 3.6e-09 64.3 51 58.8
Psat0ss1279g0480 Pisum sativum HOM05D000181 ORTHO05D004115 6.2e-09 63.5 59 55.9
FAN15G2475 Fragaria x ananassa HOM05D000181 ORTHO05D004115 1.8e-08 62.0 60 51.7
FAN27G0883 Fragaria x ananassa HOM05D000181 ORTHO05D004115 4.0e-08 60.8 60 50.0
Dinv22890 Davidia involucrata HOM05D000181 ORTHO05D004115 8.9e-08 59.7 59 50.8
Cfa017965 Carpinus fangiana HOM05D000181 ORTHO05D004115 2.0e-07 58.5 59 49.2
Atru.chr7.1092 Acer truncatum HOM05D000181 ORTHO05D004115 3.4e-07 57.8 59 44.1
Prupe.1G410800 Prunus persica HOM05D000181 ORTHO05D004115 3.4e-07 57.8 60 48.3
RcHm_v2.0_Chr6g0311091 Rosa chinensis HOM05D000181 ORTHO05D004115 3.4e-07 57.8 60 50.0
FvH4_2g31730 Fragaria vesca HOM05D000181 ORTHO05D004115 4.4e-07 57.4 60 48.3
FAN24G2478 Fragaria x ananassa HOM05D000181 ORTHO05D004115 4.4e-07 57.4 60 48.3
Hma1.2p1_0055F.1_g031460 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 5.8e-07 57.0 59 47.5
Hma1.2p1_0544F.1_g175750 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 5.8e-07 57.0 59 47.5
MD08G1063300 Malus domestica HOM05D000181 ORTHO05D004115 5.8e-07 57.0 60 46.7
Lj7A267T34 Lonicera japonica HOM05D000181 ORTHO05D004115 7.6e-07 56.6 58 46.6
MD15G1058100 Malus domestica HOM05D000181 ORTHO05D004115 7.6e-07 56.6 60 46.7
Nn8g38828 Nelumbo nucifera HOM05D000181 ORTHO05D004115 4.9e-06 53.9 60 50.0
TPR.G6586 Trifolium pratense HOM05D000181 ORTHO05D015097 6.4e-06 53.5 59 47.5
Aa31LG5G9640 Aethionema arabicum HOM05D000181 ORTHO05D004115 8.4e-06 53.1 61 44.3
CSS0033670 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 8.4e-06 53.1 59 52.5
Sc09g0009870 Simmondsia chinensis HOM05D000181 ORTHO05D004115 8.4e-06 53.1 59 44.1


User provided reference genes

Program Settings