Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 0.0e+00 1139.0 574 100.0
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 4.3e-261 904.4 580 80.2
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 1.9e-256 889.0 579 78.2
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 2.5e-256 888.6 584 78.9
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 1.0e-254 883.2 580 76.9
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 7.4e-253 877.1 578 76.8
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 7.4e-253 877.1 583 77.9
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 8.2e-252 873.6 586 76.3
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 1.4e-251 872.8 584 77.9
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 7.7e-250 867.1 579 77.4
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 3.4e-221 771.9 587 68.1
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 3.4e-221 771.9 587 68.7
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 2.2e-220 769.2 523 72.8
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 1.1e-219 766.9 580 68.3
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 5.4e-219 764.6 577 68.3
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 1.6e-218 763.1 525 72.2
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.0e-217 760.4 533 71.1
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 2.3e-217 759.2 582 67.4
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 5.6e-216 754.6 544 69.5
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 1.4e-214 750.0 574 66.2
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 6.8e-214 747.7 529 69.0
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 6.8e-214 747.7 529 69.0
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 1.3e-212 743.4 582 63.9
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 1.7e-212 743.0 578 66.6
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 6.4e-212 741.1 521 69.1
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 1.4e-211 740.0 546 67.6
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 2.4e-211 739.2 547 68.0
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 3.2e-211 738.8 555 66.7
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 1.7e-209 733.0 560 67.7
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 4.3e-208 728.4 581 64.7
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 4.3e-208 728.4 581 64.7
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.2e-207 726.9 581 64.0
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 2.8e-207 725.7 519 67.8
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 6.2e-207 724.5 588 64.3
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 8.1e-207 724.2 578 66.3
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 4.0e-206 721.8 580 65.3
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 8.9e-206 720.7 578 65.1
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.5e-205 719.9 581 64.2
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 5.8e-205 718.0 563 66.1
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.3e-204 716.8 584 64.7
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.2e-204 716.1 575 65.2
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 4.9e-204 714.9 575 65.0
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.4e-203 713.4 621 61.5
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 4.1e-203 711.8 578 65.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 5.4e-203 711.4 542 68.5
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 2.7e-202 709.1 532 65.6
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.8e-202 707.6 621 61.2
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 7.8e-202 707.6 519 66.7
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 5.6e-200 701.4 577 63.4
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.4e-198 696.8 661 58.7
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 6.8e-198 694.5 576 64.2
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 6.0e-194 681.4 583 63.0
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.7e-193 679.9 584 60.8
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.1e-192 677.2 558 64.0
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.9e-192 676.4 584 60.6
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 2.8e-191 672.5 579 61.3
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.4e-190 670.2 544 64.0
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 3.1e-190 669.1 555 61.6
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 6.9e-190 667.9 565 61.6
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 1.5e-189 666.8 567 61.4
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 1.3e-188 663.7 563 63.2
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 1.7e-188 663.3 554 61.2
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.1e-187 660.6 567 61.0
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.9e-187 659.8 585 59.0
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 3.2e-187 659.1 549 63.4
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.2e-186 657.1 583 60.4
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 1.5e-184 650.2 592 57.8
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 3.6e-183 645.6 549 61.7
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 1.8e-182 643.3 521 64.5
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 2.4e-182 642.9 581 59.9
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 6.9e-182 641.3 585 59.1
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 2.6e-181 639.4 558 60.0
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 3.4e-181 639.0 610 55.9
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 4.5e-181 638.6 555 60.9
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.7e-180 636.7 551 60.1
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 4.9e-180 635.2 589 57.7
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 3.2e-179 632.5 562 60.9
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 5.4e-179 631.7 556 60.1
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 9.3e-179 630.9 610 55.4
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 7.9e-178 627.9 562 60.7
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 2.3e-177 626.3 493 65.7
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 8.7e-177 624.4 551 59.2
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 8.7e-177 624.4 520 61.3
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 1.4e-174 617.1 495 64.4
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 1.5e-173 613.6 488 64.8
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 9.9e-173 610.9 551 58.4
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.7e-172 610.1 495 65.3
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 4.9e-172 608.6 548 58.0
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 4.9e-172 608.6 547 58.3
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 8.4e-172 607.8 586 56.3
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 2.4e-171 606.3 547 58.0
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 4.2e-171 605.5 554 58.8
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 5.5e-171 605.1 550 57.5
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 2.1e-170 603.2 527 59.6
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 3.5e-170 602.4 571 57.3
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 4.6e-170 602.1 549 57.9
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 1.0e-169 600.9 533 58.5
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.8e-169 600.1 553 57.0
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 3.0e-169 599.4 554 56.9
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 4.3e-168 595.5 574 56.4
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 5.6e-168 595.1 574 56.4
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 6.2e-167 591.7 550 58.0
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 1.4e-166 590.5 550 57.8
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 2.0e-165 586.6 536 59.7
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.1e-163 580.9 558 56.8
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.5e-163 579.7 445 67.0
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 4.2e-163 578.9 575 54.4
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 5.5e-163 578.6 569 55.9
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.6e-162 577.0 558 54.7
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 6.0e-162 575.1 512 59.4
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.1e-158 564.3 591 52.5
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.4e-155 553.9 539 55.7
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 3.9e-153 545.8 566 50.7
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 1.5e-149 533.9 497 57.1
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 1.6e-146 523.9 613 47.5
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 4.4e-144 515.8 575 49.9
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.3e-140 504.2 503 52.3
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 5.0e-140 502.3 498 54.4
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 4.2e-139 499.2 569 48.0
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 2.2e-127 460.3 558 43.9
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 4.5e-125 452.6 560 43.4
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 2.9e-108 396.7 564 45.6
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 9.5e-99 365.2 263 67.3
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.4e-97 361.3 533 39.8
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.0e-92 345.1 532 38.5
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.7e-92 344.4 476 40.8
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.3e-91 340.1 596 36.2
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 1.8e-89 334.3 236 67.4
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.5e-88 331.3 321 55.5
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.9e-87 327.0 409 43.3
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 3.9e-84 316.6 219 69.9
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 1.4e-73 281.6 277 53.8
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 2.2e-47 194.5 126 72.2
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 2.9e-47 194.1 249 44.6
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 2.9e-15 87.8 321 26.5
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 1.2e-08 65.9 138 39.1
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 1.7e-07 62.0 125 32.8
BcaC07g37382 Brassica carinata HOM05D005308 ORTHO05D006494 4.2e-06 57.4 64 46.9


User provided reference genes

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