Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.2e-168 596.7 343 100.0
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 9.6e-131 470.7 327 79.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 9.9e-128 460.7 346 77.2
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.1e-123 447.2 327 79.2
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 3.3e-123 445.7 361 69.0
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.8e-121 439.9 326 77.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.3e-119 433.7 343 73.5
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.7e-117 426.0 324 75.6
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.2e-112 410.6 325 74.2
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 2.2e-111 406.4 348 70.1
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 3.8e-111 405.6 325 73.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.9e-111 405.2 331 70.7
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 6.5e-111 404.8 329 70.2
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.9e-110 403.3 332 70.2
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.5e-109 399.1 333 73.0
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 7.9e-109 397.9 331 71.3
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.3e-108 396.4 322 70.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.1e-107 394.0 329 71.7
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.5e-107 393.7 329 70.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.3e-106 390.6 322 69.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 2.8e-106 389.4 325 70.8
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 8.2e-106 387.9 335 68.1
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 8.2e-106 387.9 320 70.3
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.4e-105 386.3 320 70.6
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.0e-104 383.3 333 70.0
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.3e-103 380.6 332 69.6
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 2.9e-103 379.4 322 67.7
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 8.5e-103 377.9 330 69.1
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 3.2e-102 375.9 319 69.0
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.5e-102 375.2 332 63.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.6e-101 373.6 324 67.6
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.7e-101 372.9 332 69.0
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.0e-100 370.9 333 67.3
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.4e-100 370.5 325 66.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.4e-100 370.5 324 63.3
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 6.7e-100 368.2 333 66.7
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 8.8e-100 367.9 332 68.4
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 1.5e-99 367.1 333 67.0
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.8e-98 362.8 332 61.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.1e-97 360.9 346 60.4
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.8e-97 360.1 328 65.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 2.4e-97 359.8 329 66.9
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.5e-96 357.1 346 59.8
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 2.6e-96 356.3 319 67.7
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 3.4e-96 355.9 324 66.4
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 7.7e-96 354.8 333 65.2
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 2.2e-95 353.2 324 66.7
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 2.9e-95 352.8 322 65.2
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 2.9e-95 352.8 321 66.7
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 3.8e-95 352.4 329 67.2
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 6.5e-95 351.7 323 67.2
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.5e-95 351.3 324 64.2
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 8.5e-95 351.3 323 60.1
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 4.2e-94 349.0 328 63.4
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 5.5e-94 348.6 332 65.1
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 5.5e-94 348.6 332 65.1
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 7.2e-94 348.2 321 66.0
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.2e-93 347.4 331 65.3
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.7e-93 346.3 332 63.0
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 7.9e-93 344.7 327 65.1
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.0e-92 344.4 323 66.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 2.3e-92 343.2 321 66.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 3.0e-92 342.8 325 64.0
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 3.9e-92 342.4 325 64.3
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.5e-91 340.5 332 64.8
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 2.6e-91 339.7 327 62.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 3.3e-91 339.3 322 63.0
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 9.7e-91 337.8 333 62.2
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 2.8e-90 336.3 324 63.6
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 3.7e-90 335.9 336 51.8
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.8e-90 335.5 322 60.6
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.1e-89 334.3 325 63.1
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 4.1e-89 332.4 327 62.1
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 5.3e-89 332.0 321 62.0
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.3e-89 332.0 338 61.2
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.5e-88 329.3 326 58.6
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.3e-87 327.4 316 63.6
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.1e-86 324.3 342 59.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 9.4e-86 321.2 323 61.3
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.8e-84 317.0 325 62.5
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 5.2e-84 315.5 331 60.1
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 9.7e-83 311.2 325 61.8
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.1e-81 307.8 322 59.0
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.8e-81 307.0 327 60.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 4.1e-81 305.8 287 67.6
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 7.0e-81 305.1 320 58.4
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.6e-80 303.9 322 52.2
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.0e-79 298.9 318 61.3
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.0e-79 298.9 318 61.3
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.5e-78 297.4 318 60.1
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 7.2e-78 295.0 345 54.2
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.7e-74 283.9 210 65.2
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 5.3e-73 278.9 282 64.5
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 7.0e-73 278.5 335 45.1
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 9.4e-70 268.1 326 53.7
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 7.5e-67 258.5 311 56.6
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 2.8e-66 256.5 167 70.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.4e-65 254.2 170 70.6
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 9.1e-65 251.5 327 53.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.7e-63 247.3 171 66.7
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.2e-62 242.7 171 66.1
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.6e-61 239.6 333 48.6
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.4e-59 233.0 212 53.3
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 9.8e-59 231.5 323 52.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.3e-58 228.4 253 47.0
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.4e-57 225.7 211 51.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 7.0e-57 225.3 170 64.1
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.3e-55 220.3 167 61.7
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.1e-49 201.4 194 52.1
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 5.4e-49 199.1 167 55.7
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 6.0e-48 195.7 168 58.9
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 6.0e-40 169.1 167 51.5
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.7e-39 167.5 184 49.5
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 9.9e-35 151.8 208 58.2
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 2.4e-33 147.1 346 36.7
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.3e-30 136.3 249 33.3
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 3.1e-28 130.2 82 74.4
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.9e-28 128.6 114 56.1
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 2.9e-26 123.6 120 53.3
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 6.0e-24 115.9 253 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.1e-22 111.7 172 34.9
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.1e-21 107.5 353 27.8
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 6.2e-21 105.9 73 64.4
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 5.3e-20 102.8 72 69.4
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.7e-18 97.8 81 59.3
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.6e-16 91.3 64 67.2
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 5.8e-11 72.8 127 37.0
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-10 71.2 46 71.7
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.3e-07 61.6 58 53.4


User provided reference genes

Program Settings