Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 3.1e-235 818.1 432 100.0
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 4.0e-102 375.9 453 52.1
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 1.4e-99 367.5 411 54.3
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 5.1e-97 359.0 450 50.7
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 1.1e-96 357.8 449 50.1
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 2.4e-94 350.1 412 53.2
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 2.5e-91 340.1 416 51.2
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 2.7e-90 336.7 412 51.0
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 1.1e-86 324.7 426 49.5
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 1.1e-83 314.7 354 53.7
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 2.0e-56 224.2 453 38.6
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 7.0e-54 215.7 436 37.6
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 2.3e-49 200.7 398 39.9
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 3.4e-48 196.8 424 38.7
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 5.9e-45 186.0 428 36.7
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 6.6e-44 182.6 425 35.8
Phvul.005G153000 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 2.5e-43 180.6 448 34.8
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 3.4e-40 170.2 448 32.8
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.7e-39 167.9 424 34.2
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 3.5e-37 160.2 411 32.1
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 1.0e-36 158.7 435 32.2
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 5.6e-35 152.9 392 32.9
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 4.0e-33 146.7 422 32.7
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 1.2e-32 145.2 312 35.6
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 1.5e-32 144.8 443 31.2
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 2.6e-32 144.1 326 34.4
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 8.3e-31 139.0 365 31.8
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 3.5e-29 133.7 437 33.0
Glyma.15G030050 Glycine max HOM05D008235 ORTHO05D009358 1.5e-27 128.3 168 51.2
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 4.3e-27 126.7 448 30.1
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 8.1e-26 122.5 411 30.2
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 6.8e-25 119.4 395 29.9
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.5e-24 118.2 390 30.5
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 2.6e-24 117.5 456 30.7
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 3.4e-24 117.1 410 29.8
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 5.8e-24 116.3 416 29.6
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 7.8e-21 105.9 387 28.9
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.7e-20 104.8 331 28.7
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 1.5e-19 101.7 387 28.2
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.9e-19 101.3 416 28.4
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 2.5e-19 100.9 331 25.4
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 3.3e-19 100.5 387 28.4
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 2.1e-18 97.8 411 29.2
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 1.1e-17 95.5 428 26.4
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.8e-17 94.7 407 28.7
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 6.8e-17 92.8 391 27.6
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 1.2e-16 92.0 322 27.0
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.5e-16 91.7 388 27.6
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 6.4e-15 86.3 328 25.3
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 1.1e-14 85.5 461 26.9
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.2e-13 82.0 330 25.5
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 1.2e-13 82.0 354 28.2
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 2.7e-13 80.9 481 25.4
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 4.6e-13 80.1 402 28.4
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 6.6e-12 76.3 304 29.9
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 6.6e-12 76.3 304 29.9
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 9.6e-11 72.4 404 27.2
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 9.6e-11 72.4 279 28.3
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 1.4e-09 68.6 300 27.3
Peaxi162Scf01052g00325 Petunia axillaris HOM05D014650 ORTHO05D009358 1.4e-09 68.6 326 27.3
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 1.8e-09 68.2 467 27.6
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 3.1e-09 67.4 294 27.2
Solyc05g050740.3 Solanum lycopersicum HOM05D014650 ORTHO05D009358 1.2e-08 65.5 313 26.8
Nitab4.5_0011467g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 9.9e-08 62.4 108 39.8
CAN.G112.20 Capsicum annuum HOM05D014650 ORTHO05D022197 1.3e-07 62.0 116 40.5
Sopen05g029150 Solanum pennellii HOM05D014650 ORTHO05D022197 1.4e-06 58.5 413 24.0
Cc03_g12910 Coffea canephora HOM05D008235 ORTHO05D009358 1.9e-06 58.2 421 26.4
Hund03161 Selenicereus undatus HOM05D019141 ORTHO05D009358 5.4e-06 56.6 129 31.0
Nitab4.5_0002598g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 7.1e-06 56.2 87 42.5
EL10Ac3g05943 Beta vulgaris HOM05D019141 ORTHO05D009358 9.3e-06 55.8 199 27.1


User provided reference genes

Program Settings