Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 1.1e-157 560.1 303 100.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 4.0e-112 408.7 313 73.5
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.5e-111 406.8 292 74.3
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.8e-109 399.8 310 73.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.4e-109 399.4 306 71.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 9.1e-109 397.5 310 72.9
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.2e-108 397.1 310 70.6
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.7e-108 396.0 315 70.8
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.3e-107 393.7 307 72.3
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.2e-105 387.1 308 70.8
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.5e-100 369.0 308 66.9
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.1e-98 364.0 309 65.4
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 7.2e-98 361.3 333 64.6
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.0e-95 353.2 304 64.5
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 5.7e-95 351.7 282 67.4
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.7e-94 350.1 304 64.8
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 2.8e-94 349.4 306 64.1
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 3.7e-94 349.0 299 64.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 4.9e-94 348.6 308 63.6
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 4.9e-94 348.6 300 64.0
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.4e-93 347.1 298 64.4
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 4.1e-93 345.5 296 64.9
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 5.4e-93 345.1 307 66.8
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.6e-92 343.6 299 64.9
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.0e-92 343.2 299 63.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 4.5e-92 342.0 302 63.6
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 5.9e-92 341.7 320 60.9
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.8e-91 339.0 313 62.6
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 5.0e-91 338.6 260 68.5
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 8.6e-91 337.8 257 66.9
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 8.6e-91 337.8 312 63.5
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 1.1e-90 337.4 316 63.6
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 3.3e-90 335.9 306 62.1
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 8.0e-89 331.3 262 66.8
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 8.0e-89 331.3 261 65.1
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-87 327.4 312 61.2
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 4.4e-87 325.5 311 59.5
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 4.4e-87 325.5 325 61.2
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 5.7e-87 325.1 260 66.9
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 7.5e-87 324.7 301 59.5
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 2.2e-86 323.2 288 61.8
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.2e-86 323.2 299 59.9
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 2.9e-86 322.8 311 58.2
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.8e-85 320.1 312 59.0
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 2.4e-85 319.7 317 59.6
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.4e-85 319.7 301 62.1
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 3.2e-85 319.3 305 59.0
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 3.2e-85 319.3 305 59.0
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 7.0e-85 318.2 301 60.1
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 9.2e-85 317.8 305 58.7
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.2e-84 317.4 305 58.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 1.6e-84 317.0 300 59.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.7e-84 316.2 294 61.9
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 4.6e-84 315.5 283 60.4
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 5.9e-84 315.1 307 58.6
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.3e-83 313.9 216 71.8
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 3.0e-83 312.8 254 64.6
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 6.6e-83 311.6 301 59.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 3.3e-82 309.3 314 58.6
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 7.3e-82 308.1 305 59.7
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.6e-81 307.0 273 61.5
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 3.6e-81 305.8 267 62.9
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.6e-81 305.8 267 64.0
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 6.2e-81 305.1 286 60.8
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.4e-80 303.9 301 60.1
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 3.1e-80 302.8 304 57.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 5.2e-80 302.0 277 60.6
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 1.2e-79 300.8 300 55.7
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.6e-79 299.7 307 58.3
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.5e-79 298.1 310 57.1
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.3e-78 297.4 229 66.8
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 8.3e-78 294.7 293 58.0
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.1e-77 294.3 299 56.9
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.4e-77 293.9 277 60.3
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.2e-76 290.8 311 55.6
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.7e-76 289.7 310 55.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.7e-76 289.7 308 54.5
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 6.0e-76 288.5 274 59.1
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 2.3e-75 286.6 344 51.2
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 2.5e-74 283.1 301 55.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.8e-72 276.9 210 69.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 2.0e-71 273.5 230 63.9
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 4.4e-71 272.3 338 49.7
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.7e-70 270.4 342 51.5
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 2.7e-68 263.1 261 54.0
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.3e-67 260.8 320 53.1
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 3.9e-67 259.2 291 57.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 8.1e-65 251.5 226 63.3
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 3.1e-64 249.6 311 50.5
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.6e-63 246.5 221 62.0
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.6e-63 246.5 270 51.1
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 6.4e-62 241.9 188 68.1
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.1e-61 239.2 245 59.2
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.9e-58 230.3 269 49.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 7.6e-55 218.4 222 57.2
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 9.6e-50 201.4 231 45.9
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 9.6e-50 201.4 148 72.3
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.6e-49 200.7 321 44.2
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 3.5e-44 183.0 212 46.7
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.3e-43 181.0 193 57.5
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 9.3e-37 158.3 135 64.4
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 2.7e-36 156.8 246 40.7
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 2.5e-34 150.2 295 36.6
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 3.3e-34 149.8 161 57.1
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.6e-33 147.5 119 65.5
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 8.2e-33 145.2 120 65.0
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 8.2e-33 145.2 163 46.0
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.4e-32 143.7 109 63.3
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 5.8e-31 139.0 120 64.2
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.0e-30 138.3 130 53.1
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 1.7e-30 137.5 123 61.0
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.6e-28 129.4 234 38.0
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 4.6e-28 129.4 117 59.0
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 9.7e-26 121.7 121 57.9
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 4.3e-18 96.3 72 61.1
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-17 94.4 105 52.4
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 5.3e-16 89.4 106 50.0
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.2e-09 67.4 60 58.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 8.2e-09 65.5 46 65.2
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.5e-07 59.7 117 38.5
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-06 57.8 61 54.1


User provided reference genes

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