Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 8.3e-147 523.9 297 100.0
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.9e-127 459.5 288 91.7
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 5.1e-120 434.9 288 82.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 8.6e-120 434.1 289 82.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 3.4e-116 422.2 273 87.2
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 9.9e-116 420.6 289 84.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.1e-113 412.9 248 88.3
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.1e-111 407.1 248 87.5
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.5e-111 406.0 248 87.5
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.1e-110 402.9 292 77.1
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.6e-108 394.4 291 76.6
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.0e-104 384.0 293 79.9
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.3e-104 383.6 291 79.7
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.4e-98 362.8 249 80.3
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.1e-96 355.1 282 73.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 8.7e-96 354.4 299 68.6
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 8.7e-96 354.4 280 76.4
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 2.8e-94 349.4 279 71.0
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.1e-93 347.4 281 70.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.1e-93 345.9 283 72.1
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.0e-93 345.5 280 69.6
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.3e-93 345.1 281 70.8
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 5.3e-93 345.1 283 69.6
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 5.3e-93 345.1 307 68.1
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 5.8e-92 341.7 286 72.7
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 7.6e-92 341.3 281 69.8
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.7e-91 340.1 288 66.7
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.7e-91 340.1 248 75.0
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 2.9e-91 339.3 281 69.4
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.9e-91 338.6 308 65.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.9e-90 336.7 270 70.0
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 4.2e-90 335.5 282 68.4
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.2e-89 334.0 302 63.9
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.2e-89 334.0 281 69.0
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 2.1e-89 333.2 248 76.2
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 2.7e-89 332.8 287 70.4
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 3.5e-89 332.4 281 68.3
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 6.0e-89 331.6 303 65.0
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.0e-88 330.9 313 64.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.3e-88 330.5 251 73.3
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 3.9e-88 328.9 282 68.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 3.9e-88 328.9 306 64.1
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 5.1e-88 328.6 297 68.0
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 6.7e-88 328.2 302 63.2
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.5e-87 326.2 280 72.5
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 2.5e-87 326.2 250 71.6
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 9.6e-87 324.3 278 66.2
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 9.6e-87 324.3 291 65.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.3e-86 323.9 281 71.9
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.3e-86 323.9 282 69.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.3e-86 323.9 280 72.1
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.3e-86 323.9 290 64.1
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.6e-86 323.6 282 72.3
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.6e-86 323.6 281 71.9
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.6e-86 323.6 281 71.9
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.6e-86 323.6 287 70.4
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.1e-86 323.2 290 69.0
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 2.8e-86 322.8 303 64.4
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 6.2e-86 321.6 291 64.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 8.1e-86 321.2 248 71.0
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.1e-85 320.9 283 71.7
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.1e-85 320.9 284 65.5
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.8e-85 320.1 296 63.5
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.4e-85 319.7 248 70.6
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 2.4e-85 319.7 298 64.8
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.4e-85 319.7 280 65.0
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 5.3e-85 318.5 280 66.1
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.2e-84 317.4 281 70.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.5e-84 315.5 293 63.8
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 7.6e-84 314.7 213 78.9
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 7.6e-84 314.7 278 65.8
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.1e-82 310.8 279 64.2
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-82 310.8 279 64.2
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.4e-82 310.5 284 65.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 9.3e-82 307.8 302 59.9
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.2e-81 307.4 279 63.4
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 6.0e-81 305.1 214 75.7
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.3e-80 303.1 278 64.4
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.7e-80 301.6 283 62.5
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.7e-80 301.6 283 62.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 6.7e-80 301.6 326 60.4
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 7.4e-79 298.1 248 69.4
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 2.8e-78 296.2 238 70.2
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.2e-78 294.7 308 57.8
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.2e-76 290.8 291 61.2
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.6e-76 289.7 278 61.2
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 2.6e-76 289.7 248 65.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 3.5e-73 279.3 182 82.4
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 6.7e-72 275.0 313 54.0
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.5e-71 273.9 284 62.3
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 1.5e-71 273.9 287 56.4
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.2e-70 268.1 286 57.7
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.1e-69 267.7 280 57.9
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.0e-69 264.6 262 59.2
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.0e-67 258.8 175 78.9
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.5e-66 256.5 286 55.2
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.0e-64 249.6 175 78.3
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.1e-63 247.7 283 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.7e-62 243.8 252 59.9
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.2e-60 237.7 403 43.2
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 3.4e-60 236.1 284 53.2
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 6.1e-57 225.3 295 52.2
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 2.9e-51 206.5 194 58.2
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 7.2e-50 201.8 135 81.5
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.6e-44 183.3 158 67.7
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.0e-40 171.4 182 58.8
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.5e-39 165.2 135 68.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.7e-38 164.1 139 68.3
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.2e-31 141.4 139 59.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.0e-31 140.6 166 54.2
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.2e-28 131.3 77 84.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.6e-27 125.6 144 53.5
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.5e-23 112.1 116 56.9
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 3.7e-14 83.2 124 42.7
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 8.3e-14 82.0 114 48.2
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.3e-14 82.0 108 49.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.9e-13 80.9 105 50.5
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 4.7e-09 66.2 42 76.2
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.8e-08 64.3 72 58.3
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 8.9e-08 62.0 194 30.9
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 5.8e-07 59.3 112 45.5


User provided reference genes

Program Settings