Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 2.0e-110 402.5 210 100.0
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 8.9e-71 270.8 274 56.9
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 2.4e-60 236.1 275 54.2
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 1.1e-57 227.3 276 53.6
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 1.5e-57 226.9 273 53.8
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 7.3e-57 224.6 266 54.9
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 5.3e-55 218.4 272 55.1
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 1.5e-54 216.9 273 52.4
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 6.4e-53 211.5 300 48.7
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 5.4e-52 208.4 250 52.0
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 7.1e-52 208.0 260 51.2
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 1.2e-51 207.2 265 52.1
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 9.6e-49 197.6 249 49.8
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 1.6e-48 196.8 276 50.0
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 8.1e-48 194.5 250 50.0
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 3.1e-47 192.6 239 54.0
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 5.3e-47 191.8 236 54.2
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 6.9e-47 191.4 260 46.2
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 1.5e-46 190.3 252 49.6
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.0e-46 189.9 263 47.1
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 2.0e-46 189.9 239 53.6
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 3.4e-46 189.1 275 46.9
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 3.4e-46 189.1 278 46.4
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 4.5e-46 188.7 270 47.0
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.5e-46 188.7 263 46.8
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 5.8e-46 188.3 239 49.8
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 5.8e-46 188.3 162 67.9
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.7e-45 186.8 255 48.2
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 1.7e-45 186.8 263 47.1
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 3.8e-45 185.7 255 47.8
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 6.4e-45 184.9 161 65.8
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 6.4e-45 184.9 293 43.3
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 1.1e-44 184.1 282 46.5
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 2.4e-44 183.0 158 66.5
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 4.2e-44 182.2 243 49.0
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 7.1e-44 181.4 248 47.2
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 9.3e-44 181.0 252 47.2
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 1.6e-43 180.3 251 46.6
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 2.1e-43 179.9 267 45.7
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.1e-43 179.9 267 47.2
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.1e-43 179.9 246 47.2
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.7e-43 179.5 266 45.1
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 4.6e-43 178.7 247 46.6
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 1.3e-42 177.2 255 47.5
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 1.3e-42 177.2 243 46.9
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 3.9e-42 175.6 253 48.2
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 3.9e-42 175.6 245 47.8
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 3.9e-42 175.6 245 47.8
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 5.1e-42 175.3 245 47.8
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 6.7e-42 174.9 248 47.2
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 1.1e-41 174.1 271 44.6
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 7.4e-41 171.4 263 47.5
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 2.1e-40 169.9 245 46.5
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 2.1e-40 169.9 250 46.4
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 4.8e-40 168.7 248 46.0
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 4.8e-40 168.7 260 46.2
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 8.1e-40 167.9 261 46.0
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 8.1e-40 167.9 248 45.6
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.4e-39 167.2 156 62.8
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 1.8e-39 166.8 235 50.2
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 1.8e-39 166.8 243 45.7
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 3.1e-39 166.0 242 47.5
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 3.1e-39 166.0 154 59.1
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 9.0e-39 164.5 255 44.3
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.2e-38 164.1 161 59.0
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 2.6e-38 162.9 256 44.1
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.0e-37 161.0 153 58.8
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 3.8e-37 159.1 160 59.4
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 3.8e-37 159.1 273 40.7
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 1.1e-36 157.5 161 59.0
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 1.2e-35 154.1 160 58.1
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 1.6e-35 153.7 261 41.0
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 2.1e-35 153.3 245 43.7
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 2.7e-35 152.9 239 44.4
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 5.1e-34 148.7 252 41.7
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 6.7e-34 148.3 284 38.7
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 4.1e-31 139.0 230 43.0
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.0e-30 136.7 234 41.9
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.0e-30 136.7 250 41.2
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.5e-30 135.6 234 41.0
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 7.6e-30 134.8 257 39.3
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 2.2e-29 133.3 262 40.1
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 8.4e-29 131.3 159 52.2
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 3.2e-28 129.4 169 48.5
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 4.2e-28 129.0 257 38.5
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 2.1e-27 126.7 256 40.6
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 3.5e-27 125.9 169 47.9
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 6.1e-27 125.2 246 40.2
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 7.4e-25 118.2 266 36.8
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 9.7e-25 117.9 250 38.0
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 4.8e-24 115.5 248 37.9
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 1.1e-23 114.4 265 36.2
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.1e-23 114.4 133 51.1
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 2.4e-23 113.2 168 46.4
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 3.8e-21 105.9 150 46.0
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 5.0e-21 105.5 256 36.7
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 3.2e-20 102.8 313 31.9
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 3.2e-20 102.8 252 34.5
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 3.2e-20 102.8 243 37.0
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 7.2e-20 101.7 222 36.0
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 7.2e-20 101.7 176 40.9
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 1.6e-19 100.5 257 34.2
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 2.1e-19 100.1 222 35.1
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 1.0e-18 97.8 231 35.1
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 1.0e-18 97.8 204 37.3
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 1.4e-18 97.4 225 36.4
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 2.3e-18 96.7 212 38.2
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 6.7e-18 95.1 102 56.9
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 6.7e-18 95.1 212 34.9
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 8.8e-18 94.7 187 37.4
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 2.0e-17 93.6 245 35.9
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 2.0e-17 93.6 245 35.9
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 6.3e-16 88.6 248 35.5
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 6.3e-16 88.6 248 35.5
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 6.3e-16 88.6 248 35.5
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 4.1e-15 85.9 164 43.9
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 2.5e-12 76.6 101 49.5
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 4.7e-11 72.4 249 31.3
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 4.7e-11 72.4 176 33.0
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.3e-08 64.3 101 45.5
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 7.0e-07 58.5 88 45.5
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 1.2e-06 57.8 157 35.0


User provided reference genes

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